SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,101912,103575,81296,81296,81296,_gap_,56112,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

101912 - Sema domain
103575 - Plexin repeat
81296 - E set domains
81296 - E set domains
81296 - E set domains
56112 - Protein kinase-like (PK-like)

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   1
Takifugu_rubripes_76_4   (Torafugu)   1

Longest transcript per gene
Genome     Number
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   1
Takifugu_rubripes_69_4   (Torafugu)   1

Others
Genome     Number
STRING_v9.0.5_(STRING) 2
Uniprot_2018_03_genome 320
NCBI_2017_08_genome 7

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