SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,102114,47781 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

102114 - Radical SAM enzymes
47781 - RuvA domain 2-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Thermanaerovibrio_acidaminovorans_DSM_6589 1
Fervidobacterium_nodosum_Rt17-B1 1
Vulcanisaeta_moutnovskia_768-28 1
Vulcanisaeta_distributa_DSM_14429 1
Methanocella_paludicola_SANAE 1
Methanosphaerula_palustris_E1-9c 1
Methanoregula_boonei_6A8 1
Methanoculleus_bourgensis_MS2 1
Thermococcus_onnurineus_NA1 1
Thermococcus_sibiricus_MM_739 1
Thermoplasmatales_archaeon_BRNA1 1
Natronomonas_pharaonis_DSM_2160 1

Strains
Genome     Number
Candidatus_Methanomassiliicoccus_intestinalis_Issoire-Mx1 1

Others
Genome     Number
STRING_v9.0.5_(STRING) 8
NCBI_2017_08_genome 38
Uniprot_2018_03_genome 630

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