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  Home > SCOP hierarchy > Domain combination - _gap_,103473,_gap_

Domain combinations for _gap_,103473,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

103473 - MFS general substrate transporter

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   55
Pan_troglodytes_76_2.1.4   (Chimpanzee)   25
Gorilla_gorilla_76_3.1   (Western gorilla)   35
Pongo_abelii_76_2   (Sumatran orangutan)   23
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   26
Papio_anubis_76   (Olive baboon)   27
Macaca_mulatta_76_1   (Rhesus monkey)   26
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   40
Otolemur_garnettii_76_3   (Small-eared galago)   33
Microcebus_murinus_76_1   (Gray mouse lemur)   10
Rattus_norvegicus_76_5.0   (Norway rat)   35
Mus_musculus_76_38   (House mouse)   54
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   16
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   31
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   22
Cavia_porcellus_76_3   (Domestic guinea pig)   20
Oryctolagus_cuniculus_76_2   (Rabbit)   31
Ochotona_princeps_76   (American pika)   17
Tupaia_belangeri_76   (Northern tree shrew)   8
Sus_scrofa_76_10.2   (Pig)   32
Bos_taurus_76_3.1   (Cattle)   34
Ovis_aries_76_3.1   (Sheep)   34
Vicugna_pacos_76_1   (Alpaca)   10
Tursiops_truncatus_76_1   (Bottlenose dolphin)   24
Mustela_putorius_furo_76_1.0   (Domestic ferret)   33
Ailuropoda_melanoleuca_76_1   (Giant panda)   28
Canis_familiaris_76_3.1   (Dog)   35
Felis_catus_76_6.2   (Domestic cat)   25
Equus_caballus_76_2   (Horse)   25
Myotis_lucifugus_76_2.0   (Little brown bat)   17
Pteropus_vampyrus_76_1   (Large flying fox)   21
Sorex_araneus_76_1   (European shrew)   13
Erinaceus_europaeus_76   (Western European hedgehog)   9
Procavia_capensis_76_1   (Cape rock hyrax)   21
Loxodonta_africana_76_3   (African savanna elephant)   29
Echinops_telfairi_76   (Small Madagascar hedgehog)   12
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   23
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   7
Macropus_eugenii_76_1.0   (Tammar wallaby)   10
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   23
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   25
Ornithorhynchus_anatinus_76_5   (Platypus)   14
Saccoglossus_kowalevskii_v3.0 38
Petromyzon_marinus_76_7.0   (Sea lamprey)   4
Meleagris_gallopavo_76_2   (Turkey)   18
Gallus_gallus_76_4   (Chicken)   27
Anas_platyrhynchos_76_1.0   (Mallard)   17
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   12
Ficedula_albicollis_76_1.0   (Collared flycatcher)   22
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   19
Anolis_carolinensis_76_2.0   (Green anole)   23
Xenopus_laevis_   (African clawed frog)   33
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   23
Latimeria_chalumnae_76_1   (Coelacanth)   29
Lepisosteus_oculatus_76   (Spotted gar)   31
Gadus_morhua_76_1   (Atlantic cod)   21
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   29
Takifugu_rubripes_76_4   (Torafugu)   69
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   32
Oryzias_latipes_76_1   (Japanese medaka)   36
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   30
Poecilia_formosa_76   (Amazon molly)   43
Oreochromis_niloticus_76_1.0   (Nile tilapia)   57
Astyanax_mexicanus_76   (Mexican tetra)   37
Danio_rerio_76_9   (Zebrafish)   53
Oikopleura_dioica 14
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   12
Ciona_intestinalis_76   (Vase tunicate)   13
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   33
Adineta_vaga 46
Octopus_bimaculoides_280 22
Crassostrea_gigas_22   (Pacific oyster)   35
Lottia_gigantea_   (Owl limpet)   22
Helobdella_robusta_ 18
Capitella_sp._I_ 20
Danaus_plexippus_OGS1.0   (Monarch butterfly)   26
Heliconius_melpomene_   (Postman butterfly)   15
Bombyx_mori_   (Domestic silkworm)   14
Nasonia_vitripennis_   (Jewel wasp)   24
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   23
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   26
Linepithema_humile_v1.1   (Argentine ant)   18
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   29
Solenopsis_invicta_v.2.2.3   (Red fire ant)   21
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   26
Atta_cephalotes_v1.1 21
Camponotus_floridanus_v3.3   (Florida carpenter ant)   30
Lucilia_cuprina   (Australian sheep blowfly)   37
Drosophila_grimshawi_1.3 48
Drosophila_willistoni_1.3 55
Drosophila_pseudoobscura_2.13 46
Drosophila_persimilis_1.3 34
Drosophila_suzukii 39
Drosophila_yakuba_1.3 48
Drosophila_simulans_1.3 35
Drosophila_sechellia_1.3 41
Drosophila_melanogaster_76_5   (Fruit fly)   85
Drosophila_erecta_1.3 44
Drosophila_ananassae_1.3 52
Drosophila_virilis_1.2 49
Drosophila_mojavensis_1.3 47
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   43
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   26
Anopheles_darlingi_22   (American malaria mosquito)   22
Anopheles_gambiae_49_3j   (African malaria mosquito)   32
Tribolium_castaneum_3.0   (Red flour beetle)   27
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   24
Acyrthosiphon_pisum_   (Pea aphid)   42
Rhodnius_prolixus_22 7
Daphnia_pulex_   (Common water flea)   27
Strigamia_maritima_22 20
Sarcoptes_scabiei 9
Tetranychus_urticae_   (Two-spotted spider mite)   31
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   17
Pristionchus_pacificus_ 18
Meloidogyne_incognita_   (Southern root-knot nematode)   12
Meloidogyne_hapla_ 12
Onchocerca_volvulus_22 23
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   23
Caenorhabditis_japonica_ 25
Caenorhabditis_brenneri_ 38
Caenorhabditis_remanei_ 37
Caenorhabditis_elegans_76_235   (Roundworm)   50
Caenorhabditis_briggsae_2 32
Trichinella_spiralis_22 12
Hymenolepis_microstoma_ 12
Echinococcus_multilocularis_ 14
Echinococcus_granulosus_ 8
Taenia_solium_   (Pork tapeworm)   8
Schistosoma_mansoni_ 10
Mnemiopsis_leidyi   (Sea walnut)   19
Thelohanellus_kitauei 1
Acropora_digitifera_v1.0 5
Nematostella_vectensis_1.0   (Starlet sea anemone)   16
Hydra_vulgaris 6
Amphimedon_queenslandica 23
Trichoplax_adhaerens_ 13
Proterospongia_sp._ATCC_50818_ 14
Monosiga_brevicollis_ 6
Sphaeroforma_arctica_JP610_ 5
Capsaspora_owczarzaki_ATCC_30864_ 15
Conidiobolus_coronatus_NRRL28638_v1.0 7
Mortierella_verticillata_NRRL_6337_ 34
Phycomyces_blakesleeanus_ 13
Rhizopus_oryzae_RA_99-880_ 4
Mucor_circinelloides_ 28
Rhizomucor_miehei_CAU432_ 17
Malassezia_globosa_CBS_7966_ 28
Sporisorium_reilianum_22 57
Ustilago_maydis_ 60
Mixia_osmundae_IAM_14324_v1.0 25
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 18
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 15
Melampsora_laricis-populina_ 29
Rhodotorula_graminis_WP1_v1.0 38
Sporobolomyces_roseus_IAM_13481_ 28
Microbotryum_violaceum_22 49
Wallemia_sebi_v1.0 21
Sphaerobolus_stellatus_v1.0 52
Piloderma_croceum_F_1598_v1.0 41
Serpula_lacrymans_var._lacrymans_S7.9_ 34
Coniophora_puteana 49
Hydnomerulius_pinastri_v2.0 41
Paxillus_rubicundulus_Ve08.2h10_v1.0 26
Pisolithus_microcarpus_441_v1.0 19
Pisolithus_tinctorius_Marx_270_v1.0 16
Scleroderma_citrinum_Foug_A_v1.0 27
Coprinopsis_cinerea_okayama7_130_v3 33
Pleurotus_ostreatus_   (Oyster mushroom)   37
Amanita_thiersii_Skay4041_v1.0 26
Amanita_muscaria_Koide_v1.0   (Fly agaric)   19
Galerina_marginata_v1.0 51
Hebeloma_cylindrosporum_h7_v2.0 30
Laccaria_bicolor_S238N-H82_ 25
Agaricus_bisporus_var._bisporus_ 32
Schizophyllum_commune_ 48
Stereum_hirsutum_FP-91666_SS1__v1.0 65
Heterobasidion_annosum_ 34
Gloeophyllum_trabeumv1.0 42
Punctularia_strigosozonata_v1.0 48
Sebacina_vermifera_MAFF_305830_v1.0 33
Fomitiporia_mediterranea_v1.0 63
Tulasnella_calospora_AL13/4D_v1.0 36
Postia_placenta_ 40
Wolfiporia_cocos_MD-104_SS10__v1.0 46
Fomitopsis_pinicolav1.0 50
Fomitopsis_pinicola_FP-58527_SS1_v3.0 48
Phanerochaete_chrysosporium_RP-78_2.1 36
Dichomitus_squalens 43
Trametes_versicolor_v1.0 43
Tremella_mesenterica_   (Witches' butter)   29
Daldinia_eschscholzii_EC12_v1.0 91
Apiospora_montagnei_NRRL_25634_v1.0 112
Magnaporthe_poae_ATCC_64411_22 61
Magnaporthe_grisea_70-15_ 89
Podospora_anserina_ 75
Sporotrichum_thermophile_ATCC_42464_ 49
Thielavia_terrestris_NRRL_8126_ 54
Chaetomium_globosum_CBS_148.51_ 52
Neurospora_tetrasperma_ 70
Neurospora_discreta_FGSC_8579_ 63
Neurospora_crassa_OR74A_ 73
Cryphonectria_parasitica_   (Chestnut blight fungus)   86
Verticillium_albo-atrum_VaMs.102_ 61
Verticillium_dahliae_VdLs.17_ 94
Acremonium_alcalophilumv_1.0 52
Glomerella_graminicola_22 109
Fusarium_graminearum_ 82
Nectria_haematococca_mpVI_ 156
Fusarium_oxysporum_f._sp._lycopersici_4286_ 100
Fusarium_verticillioides_7600_ 83
Trichoderma_asperellum_CBS_433.97_v1.0 95
Trichoderma_atroviride_ 80
Trichoderma_citrinoviride_v1.0 65
Trichoderma_reesei_1.2 62
Trichoderma_virens_Gv29-8_ 80
Trichoderma_longibrachiatum_ATCC_18648_v1.0 58
Trichoderma_harzianum_CBS_226.95_v1.0 93
Amorphotheca_resinae_v1.0   (Creosote fungus)   64
Botrytis_cinerea_B05.10_ 65
Sclerotinia_sclerotiorum_ 68
Blumeria_graminis_22 25
Didymella_exigua_CBS_183.55_v1.0 88
Leptosphaeria_maculans_22 81
Setosphaeria_turcica_v1.0 85
Cochliobolus_miyabeanus_ATCC_44560_v1.0 95
Cochliobolus_victoriae_FI3_v1.0 91
Cochliobolus_carbonum_26-R-13_v1.0 92
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   81
Alternaria_brassicicola_ 60
Cochliobolus_lunatus_m118_v2.0 96
Pyrenophora_teres_f._teres_22 89
Pyrenophora_tritici-repentis_ 92
Stagonospora_nodorum_ 101
Mycosphaerella_graminicola_IPO323_ 48
Zasmidium_cellare_ATCC_36951_v1.0 145
Dothistroma_septosporum 89
Septoria_musiva_v1.0 80
Mycosphaerella_fijiensis_CIRAD86_ 71
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 83
Paracoccidioides_brasiliensis_Pb18_ 34
Coccidioides_posadasii_RMSCC_3488_ 42
Coccidioides_immitis_RS_ 53
Ajellomyces_dermatitidis_SLH14081_ 41
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 30
Microsporum_canis_CBS_113480_ 47
Trichophyton_equinum_CBS_127.97_ 37
Trichophyton_verrucosum_HKI_0517_ 44
Arthroderma_benhamiae_CBS_112371_ 37
Trichophyton_tonsurans_CBS_112818_ 42
Trichophyton_rubrum_CBS_118892_ 43
Uncinocarpus_reesii_1704_ 37
Aspergillus_zonatus_v1.0 82
Penicillium_chrysogenum_Wisconsin_54-1255_ 133
Penicillium_chrysogenum_v1.0 126
Aspergillus_acidus_v1.0 113
Aspergillus_fumigatus_Af293 92
Aspergillus_brasiliensis_v1.0 111
Aspergillus_nidulans_FGSC_A4_ 91
Aspergillus_sydowii_v1.0 150
Aspergillus_versicolor_v1.0 152
Aspergillus_glaucus 78
Aspergillus_carbonarius_ITEM_5010_ 91
Neosartorya_fischeri_NRRL_181_ 99
Aspergillus_terreus_NIH2624_ 100
Aspergillus_tubingensis_v1.0 108
Aspergillus_wentii_v1.0 95
Aspergillus_oryzae_RIB40_ 127
Aspergillus_niger_22 126
Aspergillus_niger_ATCC_1015_ 69
Aspergillus_flavus_NRRL3357_ 99
Aspergillus_clavatus_NRRL_1_ 79
Penicillium_marneffei_ATCC_18224_ 92
Tuber_melanosporum_Mel28_22 27
Tuber_melanosporum_Vittad_   (Perigord truffle)   27
Hansenula_polymorpha_v2.0 29
Dekkera_bruxellensis_CBS_2499_v2.0 33
Pichia_membranifaciensv1.0 26
Candida_tanzawaensis_NRRL_Y-17324__v1.0 35
Candida_dubliniensis_CD36_ 49
Candida_tropicalis_MYA-3404_ 46
Candida_parapsilosis_ 53
Candida_albicans_SC5314 39
Lodderomyces_elongisporus_NRRL_YB-4239_ 39
Babjeviella_inositovora_NRRL_Y-12698_v1.0 41
Pichia_stipitis_CBS_6054_ 50
Candida_guilliermondii_ATCC_6260_ 45
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 48
Debaromyces_hansenii 71
Wickerhamomyces_anomalus 60
Pichia_pastoris_GS115_ 29
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 27
Yarrowia_lipolytica_CLIB122 58
Candida_lusitaniae_ATCC_42720_ 29
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 29
Vanderwaltozyma_polyspora_DSM_70294_ 25
Candida_glabrata_CBS138 27
Kluyveromyces_thermotolerans_CBS_6340 38
Lachancea_kluyveri_ 46
Kluyveromyces_waltii 35
Ashbya_gossypii_ATCC_10895_ 22
Zygosaccharomyces_rouxii_ 35
Saccharomyces_mikatae_MIT 32
Saccharomyces_paradoxus_MIT 42
Saccharomyces_cerevisiae_76   (Baker's yeast)   48
Saccharomyces_bayanus_MIT 28
Kluyveromyces_lactis 40
Schizosaccharomyces_cryophilus_OY26_22 16
Schizosaccharomyces_octosporus_yFS286_ 17
Schizosaccharomyces_japonicus_yFS275_ 16
Schizosaccharomyces_pombe   (Fission yeast)   22
Catenaria_anguillulae_PL171_v1.0 13
Allomyces_macrogynus_ATCC_38327_ 40
Spizellomyces_punctatus_DAOM_BR117_ 12
Dictyostelium_discoideum 22
Dictyostelium_purpureum_ 17
Entamoeba_dispar_1.2 5
Entamoeba_invadens_1.2 6
Entamoeba_histolytica_1 4
Selaginella_moellendorffii_ 32
Pinus_taeda   (Loblolly pine)   58
Picea_abies   (Norway spruce)   32
Eucalyptus_grandis_v201   (Rose gum)   63
Theobroma_cacao_B97-61/B2_v1   (Cacao)   46
Gossypium_raimondii_v221 85
Citrus_clementina_v165 42
Citrus_sinensis_v154   (Sweet orange)   28
Thellungiella_halophila_v173 38
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   65
Capsella_rubella_v183 42
Arabidopsis_lyrata_   (Lyrate rockcress)   31
Arabidopsis_thaliana_10   (Thale cress)   40
Carica_papaya_   (Papaya)   23
Medicago_truncatula_   (Barrel medic)   45
Phaseolus_vulgaris_v186   (French bean)   49
Glycine_max_v109   (Soybean)   61
Cucumis_sativus_v122   (Cucumber)   36
Fragaria_vesca_   (Wild strawberry)   50
Malus_domestica_v196   (Apple)   81
Prunus_persica_v139   (Peach)   38
Linum_usitatissimum_v200   (Flax)   68
Manihot_esculenta_v147   (Cassava)   47
Populus_trichocarpa_v156   (Black cottonwood)   61
Vitis_vinifera_   (Wine grape)   24
Mimulus_guttatus_v140   (Spotted monkey flower)   39
Solanum_lycopersicum_v.2.3   (Tomato)   49
Solanum_tuberosum_   (Potato)   45
Actinidia_chinensis_Hongyang_ 31
Aquilegia_coerulea_v195 42
Triticum_urartu_22 31
Triticum_aestivum_22   (Bread wheat)   80
Aegilops_tauschii_22 38
Brachypodium_distachyon_   (Stiff brome)   55
Oryza_barthii_22   (African wild rice)   52
Oryza_meridionalis_22 64
Oryza_glumaepatula_22 74
Oryza_glaberrima   (African rice)   50
Oryza_punctata_22 73
Oryza_nivara_22 77
Oryza_brachyantha_22   (Malo sina)   51
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   74
Oryza_sativa_v193   (Rice)   73
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   29
Panicum_virgatum_v202   (Switchgrass)   72
Setaria_italica_v164   (Foxtail millet)   59
Zea_mays_subsp._mays_   (Maize)   58
Zea_mays_v181   (Maize)   68
Sorghum_bicolor_   (Sorghum)   51
Musa_balbisiana   (Balbis banana)   65
Musa_acuminata_22   (Wild Malaysian banana)   41
Amborella_trichopoda_22 25
Physcomitrella_patens 24
Coccomyxa_subellipsoidea_sp._C-169_v2 15
Asterochloris_sp._Cgr/DA1pho_v1.0 6
Chlorella_variabilis_sp._NC64A_ 10
Chlorella_vulgaris_ 12
Volvox_carteri_f._nagariensis_ 13
Volvox_carteri_v199 11
Chlamydomonas_reinhardtii_4.0 12
Ostreococcus_lucimarinus_CCE9901_ 3
Ostreococcus_tauri_ 5
Bathycoccus_prasinos_ 14
Micromonas_sp._RCC299_ 9
Micromonas_pusilla_CCMP1545_v3.0 10
Cyanidioschyzon_merolae_strain_10D_22 9
Cyanidioschyzon_merolae 9
Porphyridium_purpureum_02_2012 2
Thecamonas_trahens_ATCC_50062_ 7
Bigelowiella_natans_CCMP2755_22 11
Giardia_lamblia_2.3 4
Cyanophora_paradoxa_ 1
Leishmania_mexicana_2.4 11
Leishmania_major_strain_Friedlin_ 14
Leishmania_infantum_JPCM5_2.4 17
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 12
Trypanosoma_vivax_ 3
Trypanosoma_cruzi_strain_CL_Brener 8
Trypanosoma_congolense_2.4 2
Trypanosoma_brucei_gambiense_v4.1 2
Trypanosoma_brucei_TREU927_v4.1 1
Ectocarpus_siliculosus 17
Aureococcus_anophagefferens_ 14
Albugo_laibachii_22 24
Pythium_iwayamai_DAOM_BR242034_22 29
Pythium_arrhenomanes_ATCC_12531_22 36
Pythium_ultimum_v1.7-2 72
Pythium_aphanidermatum_DAOM_BR444_22 55
Pythium_irregulare_DAOM_BR486_22 44
Pythium_vexans_DAOM_BR484_22 44
Phytophthora_ramorum_1.1   (Sudden oak death agent)   69
Phytophthora_sojae_1.1 66
Phytophthora_infestans_T30-4_ 40
Phytophthora_capsici_ 42
Hyaloperonospora_arabidopsidis_22 18
Phaeodactylum_tricornutumCCAP_1055/1 19
Fragilariopsis_cylindrus 31
Thalassiosira_pseudonana_CCMP1335 18
Perkinsus_marinus_ATCC_50983_ 16
Paramecium_tetraurelia_ 12
Tetrahymena_thermophila_SB210_1_ 26
Ichthyophthirius_multifiliis_strain_G5_ 3
Cryptosporidium_hominis 4
Cryptosporidium_muris 6
Cryptosporidium_parvum_Iowa_II 6
Neospora_caninum 21
Toxoplasma_gondii_VEG 21
Toxoplasma_gondii_ME49 20
Toxoplasma_gondii_GT1 20
Babesia_bovis_T2Bo_ 5
Theileria_parva__ 4
Theileria_annulata 3
Plasmodium_falciparum_3D7_ 6
Plasmodium_vivax_SaI-1_7.0 4
Plasmodium_knowlesi_strain_H_ 4
Plasmodium_yoelii_ssp._yoelii_1_ 4
Plasmodium_chabaudi_ 4
Plasmodium_berghei_ANKA_ 4
Symbiodinium_minutum_clade_B1_v1.2 54
Naegleria_gruberi_ 13
Trichomonas_vaginalis_ 1
Guillardia_theta_CCMP2712_v1.0_ 8
Emiliania_huxleyi_CCMP1516_ 41
Pseudanabaena_sp._PCC_7367 1
Gloeobacter_violaceus_PCC_7421 1
Mycoplasma_penetrans_HF-2 1
Mycoplasma_pulmonis_UAB_CTIP 1
Mycoplasma_pneumoniae_309 2
Mycoplasma_genitalium_G37 1
Mycoplasma_gallisepticum_str._F 1
Eggerthella_lenta_DSM_2243 1
Coriobacterium_glomerans_PW2 1
Acidimicrobium_ferrooxidans_DSM_10331 2
Thermobispora_bispora_DSM_43833 2
Nakamurella_multipartita_DSM_44233 2
Modestobacter_marinus 2
Blastococcus_saxobsidens_DD2 1
Geodermatophilus_obscurus_DSM_43160 2
Kineococcus_radiotolerans_SRS30216 3
Catenulispora_acidiphila_DSM_44928 8
Stackebrandtia_nassauensis_DSM_44728 1
Frankia_symbiont_of_Datisca_glomerata 2
Frankia_sp._EAN1pec 6
Frankia_alni_ACN14a 6
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 1
Thermomonospora_curvata_DSM_43183 1
Streptosporangium_roseum_DSM_43021 2
Kitasatospora_setae_KM-6054 5
Streptomyces_coelicolor_A3(2) 1
Streptomyces_sp._PAMC26508 2
Streptomyces_flavogriseus_ATCC_33331 2
Streptomyces_sp._SirexAA-E 2
Streptomyces_griseus_subsp._griseus_NBRC_13350 0
Streptomyces_bingchenggensis_BCW-1 3
Streptomyces_violaceusniger_Tu_4113 3
Streptomyces_avermitilis_MA-4680 0
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 3
Streptomyces_scabiei_87.22 1
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 0
Pseudonocardia_dioxanivorans_CB1190 3
Amycolatopsis_mediterranei_U32 1
Kribbella_flavida_DSM_17836 1
Propionibacterium_acnes_SK137 1
Propionibacterium_freudenreichii_subsp._shermanii_CIRM-BIA1 4
Salinispora_tropica_CNB-440 2
Verrucosispora_maris_AB-18-032 1
Micromonospora_sp._L5 3
Micromonospora_aurantiaca_ATCC_27029 3
Actinoplanes_sp._N902-109 3
Actinoplanes_sp._SE50/110 2
Actinoplanes_missouriensis_431 2
Segniliparus_rotundus_DSM_44985 2
Tsukamurella_paurometabola_DSM_20162 1
Gordonia_sp._KTR9 4
Gordonia_polyisoprenivorans_VH2 3
Gordonia_bronchialis_DSM_43247 1
Rhodococcus_jostii_RHA1 2
Rhodococcus_equi_103S 1
Rhodococcus_opacus_B4 2
Nocardia_cyriacigeorgica_GUH-2 0
Amycolicicoccus_subflavus_DQS3-9A1 1
Mycobacterium_massiliense_str._GO_06 1
Mycobacterium_abscessus_ATCC_19977 1
Mycobacterium_intracellulare_ATCC_13950 3
Mycobacterium_avium_104 2
Mycobacterium_canettii_CIPT_140010059 1
Mycobacterium_africanum_GM041182 1
Mycobacterium_tuberculosis_KZN_1435 1
Mycobacterium_tuberculosis 1
Mycobacterium_bovis_BCG_str._Pasteur_1173P2 1
Mycobacterium_rhodesiae_NBB3 1
Mycobacterium_ulcerans_Agy99 1
Mycobacterium_chubuense_NBB4 1
Mycobacterium_marinum_M 2
Mycobacterium_leprae_Br4923 1
Corynebacterium_resistens_DSM_45100 2
Corynebacterium_kroppenstedtii_DSM_44385 1
Corynebacterium_efficiens_YS-314 2
Corynebacterium_urealyticum_DSM_7109 1
Corynebacterium_jeikeium_K411 1
Corynebacterium_variabile_DSM_44702 1
Corynebacterium_pseudotuberculosis_316 1
Corynebacterium_glutamicum_R 1
Beutenbergia_cavernae_DSM_12333 2
Leifsonia_xyli_subsp._xyli_str._CTCB07 1
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 2
Intrasporangium_calvum_DSM_43043 3
Brachybacterium_faecium_DSM_4810 1
Isoptericola_variabilis_225 1
Xylanimonas_cellulosilytica_DSM_15894 1
Cellulomonas_fimi_ATCC_484 2
Arthrobacter_phenanthrenivorans_Sphe3 2
Arthrobacter_chlorophenolicus_A6 3
Arthrobacter_aurescens_TC1 3
Kocuria_rhizophila_DC2201 1
Rothia_mucilaginosa_DY-18 1
Arthrobacter_sp._Rue61a 2
Arthrobacter_sp._FB24 2
Renibacterium_salmoninarum_ATCC_33209 1
Bifidobacterium_longum_subsp._longum_JDM301 1
Bifidobacterium_breve_ACS-071-V-Sch8b 2
Arcanobacterium_haemolyticum_DSM_20595 1
Mobiluncus_curtisii_ATCC_43063 1
Actinomyces_sp._F0330 2
Dehalogenimonas_lykanthroporepellens_BL-DC-9 1
Thermomicrobium_roseum_DSM_5159 1
Chloroflexus_sp._MS-G 1
Deinococcus_deserti_VCD115 2
Deinococcus_geothermalis_DSM_11300 2
Thermaerobacter_marianensis_DSM_12885 1
Desulfosporosinus_acidiphilus_SJ4 1
Desulfotomaculum_kuznetsovii_DSM_6115 1
Desulfotomaculum_ruminis_DSM_2154 1
Moorella_thermoacetica_ATCC_39073 1
Lactobacillus_casei_ATCC_334 1
Lactobacillus_rhamnosus_Lc_705 1
Exiguobacterium_sp._MH3 1
Exiguobacterium_sibiricum_255-15 1
Brevibacillus_brevis_NBRC_100599 2
Paenibacillus_mucilaginosus_3016 1
Geobacillus_thermoglucosidasius_C56-YS93 2
Anoxybacillus_flavithermus_WK1 1
Geobacillus_thermoleovorans_CCB_US3_UF5 1
Geobacillus_kaustophilus_HTA426 2
Geobacillus_sp._GHH01 2
Geobacillus_sp._WCH70 2
Geobacillus_thermodenitrificans_NG80-2 1
Bacillus_sp._JS 1
Bacillus_amyloliquefaciens_FZB42 2
Bacillus_atrophaeus_1942 2
Bacillus_subtilis_subsp._subtilis_str._168 1
Bacillus_licheniformis_DSM_13_=_ATCC_14580 2
Bacillus_weihenstephanensis_KBAB4 1
Bacillus_thuringiensis_str._Al_Hakam 2
Bacillus_cereus_03BB102 2
Bacillus_anthracis_str._A0248 2
Bacillus_megaterium_DSM_319 1
Macrococcus_caseolyticus_JCSC5402 1
Staphylococcus_pseudintermedius_HKU10-03 1
Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305 1
Staphylococcus_lugdunensis_HKU09-01 1
Staphylococcus_haemolyticus_JCSC1435 1
Staphylococcus_epidermidis_RP62A 1
Staphylococcus_carnosus_subsp._carnosus_TM300 1
Staphylococcus_aureus_subsp._aureus_JH1 1
Staphylococcus_aureus 1
Niastella_koreensis_GR20-10 1
Chitinophaga_pinensis_DSM_2588 2
Fibrella_aestuarina 2
Spirosoma_linguale_DSM_74 1
Candidatus_Azobacteroides_pseudotrichonymphae_genomovar._CFP2 1
Prevotella_ruminicola_23 2
Bacteroides_salanitronis_DSM_18170 1
Bacteroides_thetaiotaomicron_VPI-5482 1
Pedobacter_saltans_DSM_12145 1
Solitalea_canadensis_DSM_3403 2
Pedobacter_heparinus_DSM_2366 1
Sphingobacterium_sp._21 2
Maribacter_sp._HTCC2170 1
Waddlia_chondrophila_WSU_86-1044 1
Candidatus_Protochlamydia_amoebophila_UWE25 2
Simkania_negevensis_Z 1
Chlamydia_muridarum_Nigg 1
Chlamydophila_pneumoniae_TW-183 1
Chlamydophila_caviae_GPIC 2
Chlamydophila_felis_Fe/C-56 1
Chlamydophila_abortus_S26/3 1
Chlamydia_psittaci_01DC11 2
Chlamydia_trachomatis_B/Jali20/OT 1
Planctomyces_brasiliensis_DSM_5305 1
Elusimicrobium_minutum_Pei191 1
Terriglobus_saanensis_SP1PR4 1
Terriglobus_roseus_DSM_18391 1
Acidobacterium_capsulatum_ATCC_51196 1
Acidithiobacillus_caldus_SM-1 3
Lawsonia_intracellularis_PHE/MN1-00 1
Geobacter_sulfurreducens_KN400 1
Sorangium_cellulosum_'So_ce_56' 1
Corallococcus_coralloides_DSM_2259 1
Myxococcus_xanthus_DK_1622 1
Pseudogulbenkiania_sp._NH8B 1
Methylibium_petroleiphilum_PM1 1
Burkholderia_rhizoxinica_HKI_454 2
Burkholderia_phytofirmans_PsJN 2
Burkholderia_phymatum_STM815 3
Burkholderia_xenovorans_LB400 1
Ralstonia_eutropha_JMP134 1
Cupriavidus_metallidurans_CH34 1
Ralstonia_pickettii_12D 2
Ralstonia_solanacearum_CFBP2957 2
Burkholderia_sp._RPE64 2
Burkholderia_sp._CCGE1002 2
Burkholderia_thailandensis_E264 6
Burkholderia_pseudomallei_1106a 1
Burkholderia_mallei_SAVP1 2
Burkholderia_ambifaria_AMMD 2
Burkholderia_cenocepacia_HI2424 1
Burkholderia_multivorans_ATCC_17616 1
Burkholderia_vietnamiensis_G4 3
Burkholderia_gladioli_BSR3 4
Burkholderia_glumae_BGR1 2
Verminephrobacter_eiseniae_EF01-2 1
Alicycliphilus_denitrificans_K601 1
Delftia_sp._Cs1-4 1
Delftia_acidovorans_SPH-1 2
Variovorax_paradoxus_S110 1
Acidovorax_ebreus_TPSY 1
Acidovorax_sp._JS42 1
Acidovorax_citrulli_AAC00-1 1
Acidovorax_avenae_subsp._avenae_ATCC_19860 2
Comamonas_testosteroni_CNB-2 3
Collimonas_fungivorans_Ter331 1
Herbaspirillum_seropedicae_SmR1 2
Pusillimonas_sp._T7-7 1
Bordetella_petrii_DSM_12804 2
Bordetella_bronchiseptica_RB50 1
Achromobacter_xylosoxidans_A8 2
Achromobacter_xylosoxidans 2
Methylovorus_sp._MP688 1
Methylovorus_glucosetrophus_SIP3-4 1
Asticcacaulis_excentricus_CB_48 1
Brevundimonas_subvibrioides_ATCC_15264 1
Caulobacter_sp._K31 3
Caulobacter_crescentus_NA1000 1
Caulobacter_segnis_ATCC_21756 1
Phenylobacterium_zucineum_HLK1 3
Novosphingobium_aromaticivorans_DSM_12444 1
Sphingobium_japonicum_UT26S 1
Sphingobium_chlorophenolicum_L-1 1
Sphingomonas_sp._MM-1 2
Sphingomonas_wittichii_RW1 1
Maricaulis_maris_MCS10 1
Hyphomonas_neptunium_ATCC_15444 1
Pseudovibrio_sp._FO-BEG1 1
Ketogulonicigenium_vulgare_Y25 1
Ketogulonigenium_vulgarum_WSH-001 1
Rhodobacter_sphaeroides_ATCC_17029 1
Paracoccus_denitrificans_PD1222 1
Rhodospirillum_rubrum_F11 1
Azospirillum_sp._B510 1
Gluconacetobacter_xylinus_NBRC_3288 2
Granulibacter_bethesdensis_CGDNIH1 1
Gluconacetobacter_diazotrophicus_PAl_5 1
Acetobacter_pasteurianus_IFO_3283-01 1
Starkeya_novella_DSM_506 1
Xanthobacter_autotrophicus_Py2 1
Azorhizobium_caulinodans_ORS_571 1
Methylobacterium_sp._4-46 1
Brucella_microti_CCM_4915 1
Brucella_pinnipedialis_B2/94 1
Brucella_canis_ATCC_23365 1
Brucella_suis_ATCC_23445 1
Brucella_melitensis_ATCC_23457 1
Brucella_ovis_ATCC_25840 1
Brucella_abortus_S19 0
Sinorhizobium_fredii_NGR234 2
Sinorhizobium_medicae_WSM419 1
Sinorhizobium_meliloti_AK83 3
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 1
Rhizobium_etli_CIAT_652 1
Rhizobium_leguminosarum_bv._viciae_3841 1
Agrobacterium_tumefaciens_str._C58 1
Agrobacterium_radiobacter_K84 3
Agrobacterium_sp._H13-3 1
Mesorhizobium_opportunistum_WSM2075 2
Mesorhizobium_loti_MAFF303099 2
Methylocella_silvestris_BL2 2
Beijerinckia_indica_subsp._indica_ATCC_9039 1
Pelagibacterium_halotolerans_B2 1
Hyphomicrobium_sp._MC1 1
Bradyrhizobium_japonicum_USDA_110 4
Bradyrhizobium_sp._ORS_278 2
Methylocystis_sp._SC2 2
Bartonella_tribocorum_CIP_105476 2
Bartonella_henselae_str._Houston-1 1
Bartonella_grahamii_as4aup 1
Bartonella_quintana_str._Toulouse 1
Bartonella_bacilliformis_KC583 1
Saccharophagus_degradans_2-40 1
Haemophilus_ducreyi_35000HP 1
Actinobacillus_pleuropneumoniae_serovar_5b_str._L20 1
Shewanella_violacea_DSS12 1
Glaciecola_nitratireducens_FR1064 2
Marinobacter_sp._BSs20148 1
Kangiella_koreensis_DSM_16069 1
Marinomonas_sp._MWYL1 1
Halomonas_elongata_DSM_2581 2
Dichelobacter_nodosus_VCS1703A 1
Rhodanobacter_denitrificans 1
Frateuria_aurantia_DSM_6220 1
Pseudoxanthomonas_spadix_BD-a59 1
Stenotrophomonas_maltophilia_K279a 1
Xanthomonas_axonopodis_pv._citri_str._306 2
Xanthomonas_campestris_pv._campestris_str._B100 2
Coxiella_burnetii_Dugway_5J108-111 1
Edwardsiella_ictaluri_93-146 1
Edwardsiella_tarda_EIB202 1
Serratia_sp._AS12 1
Serratia_sp._ATCC_39006 2
Serratia_plymuthica_AS9 1
Serratia_proteamaculans_568 2
Dickeya_dadantii_Ech703 1
Pantoea_ananatis_LMG_20103 1
Escherichia_blattae_DSM_4481 1
Cronobacter_turicensis_z3032 2
Cronobacter_sakazakii_ES15 1
Klebsiella_oxytoca_E718 3
Klebsiella_variicola_At-22 2
Klebsiella_pneumoniae_NTUH-K2044 1
Enterobacter_aerogenes_KCTC_2190 2
Enterobacter_sp._R4-368 1
Enterobacter_sp._638 1
Enterobacter_asburiae_LF7a 1
Enterobacter_cloacae_subsp._dissolvens_SDM 1
Citrobacter_koseri_ATCC_BAA-895 2
Pseudomonas_sp._TKP 1
Pseudomonas_sp._UW4 2
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 1
Pseudomonas_entomophila_L48 1
Pseudomonas_syringae_pv._tomato_str._DC3000 3
Pseudomonas_putida_F1 1
Pseudomonas_protegens_Pf-5 2
Pseudomonas_fluorescens_SBW25 4
Moraxella_catarrhalis_RH4 1
Acinetobacter_oleivorans_DR1 2
Acinetobacter_calcoaceticus_PHEA-2 1
Acinetobacter_sp._ADP1 1
Methylophaga_sp._JAM1 2
Fervidicoccus_fontis_Kam940 1
Metallosphaera_sedula_DSM_5348 1
Caldivirga_maquilingensis_IC-167 1
Thermoproteus_uzoniensis_768-20 1
Picrophilus_torridus_DSM_9790 1
Methanobrevibacter_ruminantium_M1 1

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   28
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   69
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   51
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   28
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   47
Cryptococcus_neoformans_var._grubii_H99_ 62
Cryptococcus_neoformans_B-3501A_ 75
Cryptococcus_neoformans_JEC21_ 63
Paracoccidioides_brasiliensis_Pb01_ 30
Paracoccidioides_brasiliensis_Pb03_ 36
Coccidioides_posadasii_str._Silveira_ 44
Coccidioides_immitis_RMSCC_3703_ 32
Coccidioides_immitis_RMSCC_2394_ 43
Coccidioides_immitis_H538.4_ 31
Ajellomyces_dermatitidis_ER-3_ 44
Histoplasma_capsulatum_H143 31
Histoplasma_capsulatum_H88 42
Histoplasma_capsulatum_G186AR 40
Aspergillus_fumigatus_A1163_ 89
Candida_albicans_WO-1_ 45
Saccharomyces_cerevisiae_UC5 27
Saccharomyces_cerevisiae_PW5 29
Saccharomyces_cerevisiae_FL100 16
Saccharomyces_cerevisiae_CLIB382 1
Saccharomyces_cerevisiae_CLIB324 6
Saccharomyces_cerevisiae_CBS7960 21
Saccharomyces_cerevisiae_YJM269 19
Saccharomyces_cerevisiae_T7 39
Saccharomyces_cerevisiae_FostersB 12
Saccharomyces_cerevisiae_FostersO 12
Saccharomyces_cerevisiae_VL3 20
Saccharomyces_cerevisiae_Vin13 14
Saccharomyces_cerevisiae_LalvinQA23 15
Saccharomyces_cerevisiae_AWRI796 13
Saccharomyces_cerevisiae_Sigma1278b 39
Saccharomyces_cerevisiae_W303 39
Saccharomyces_cerevisiae_JAY291 31
Saccharomyces_cerevisiae_AWRI1631 18
Saccharomyces_cerevisiae_YPS163 9
Saccharomyces_cerevisiae_M22 14
Saccharomyces_cerevisiae_T73 12
Saccharomyces_cerevisiae_CLIB215 16
Saccharomyces_cerevisiae_Y10 6
Saccharomyces_cerevisiae_YJM789_ 39
Saccharomyces_cerevisiae_YJM789 38
Saccharomyces_cerevisiae_RM11-1a 37
Saccharomyces_cerevisiae_RM11-1a_ 34
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   47
Schizosaccharomyces_pombe_972h-_ 22
Batrachochytrium_dendrobatidis_JEL423_ 5
Batrachochytrium_dendrobatidis_JAM81_ 7
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   44
Hordeum_vulgare_22   (Domesticated barley)   49
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   61
Trypanosoma_brucei_Lister_427_v4.1 2
Neospora_caninum_Nc-Liverpool_6.2 21
Plasmodium_falciparum_HB3_ 5
Plasmodium_falciparum_Dd2_ 2
Synechococcus_sp._WH_7803 1
Crinalium_epipsammum_PCC_9333 1
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 2
Mycoplasma_pneumoniae_M129-B7 2
Mycoplasma_pneumoniae_FH 2
Mycoplasma_pneumoniae_M129 2
Mycoplasma_genitalium_M2321 1
Mycoplasma_genitalium_M2288 1
Mycoplasma_genitalium_M6282 1
Mycoplasma_genitalium_M6320 1
Mycoplasma_gallisepticum_NC08_2008.031-4-3P 1
Mycoplasma_gallisepticum_CA06_2006.052-5-2P 1
Mycoplasma_gallisepticum_NC06_2006.080-5-2P 1
Mycoplasma_gallisepticum_WI01_2001.043-13-2P 1
Mycoplasma_gallisepticum_NY01_2001.047-5-1P 1
Mycoplasma_gallisepticum_NC96_1596-4-2P 1
Mycoplasma_gallisepticum_NC95_13295-2-2P 1
Mycoplasma_gallisepticum_VA94_7994-1-7P 1
Mycoplasma_gallisepticum_S6 1
Mycoplasma_gallisepticum_str._R(high) 1
Mycoplasma_gallisepticum_str._R(low) 1
Adlercreutzia_equolifaciens_DSM_19450 1
Frankia_sp._EuI1c 7
Frankia_sp._CcI3 1
Streptomyces_albus_J1074 1
Streptomyces_rapamycinicus_NRRL_5491 3
Streptomyces_davawensis_JCM_4913 0
Streptomyces_fulvissimus_DSM_40593 2
Streptomyces_venezuelae_ATCC_10712 1
Streptomyces_collinus_Tu_365 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 2
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 0
Amycolatopsis_mediterranei_RB 1
Amycolatopsis_mediterranei_S699 1
Amycolatopsis_mediterranei_S699 1
Amycolatopsis_orientalis_HCCB10007 2
Propionibacterium_avidum_44067 2
Propionibacterium_acnes_ATCC_11828 1
Propionibacterium_acnes_TypeIA2_P.acn31 1
Propionibacterium_acnes_TypeIA2_P.acn17 1
Propionibacterium_acnes_TypeIA2_P.acn33 1
Propionibacterium_acnes_C1 1
Propionibacterium_acnes_HL096PA1 2
Propionibacterium_acnes_6609 1
Propionibacterium_acnes_266 2
Propionibacterium_acnes_KPA171202 2
Propionibacterium_acidipropionici_ATCC_4875 3
Actinoplanes_friuliensis_DSM_7358 2
Rhodococcus_pyridinivorans_SB3094 1
Rhodococcus_erythropolis_CCM2595 1
Nocardia_brasiliensis_ATCC_700358 2
Mycobacterium_sp._MOTT36Y 3
Mycobacterium_sp._JDM601 2
Mycobacterium_abscessus_subsp._bolletii_50594 1
Mycobacterium_liflandii_128FXT 3
Mycobacterium_yongonense_05-1390 3
Mycobacterium_intracellulare_MOTT-64 3
Mycobacterium_indicus_pranii_MTCC_9506 3
Mycobacterium_intracellulare_MOTT-02 3
Mycobacterium_avium_subsp._paratuberculosis_MAP4 3
Mycobacterium_avium_subsp._paratuberculosis_K-10 2
Mycobacterium_canettii_CIPT_140070017 1
Mycobacterium_canettii_CIPT_140060008 1
Mycobacterium_canettii_CIPT_140070008 1
Mycobacterium_canettii_CIPT_140070010 1
Mycobacterium_tuberculosis_EAI5/NITR206 1
Mycobacterium_tuberculosis_EAI5 1
Mycobacterium_tuberculosis_CAS/NITR204 1
Mycobacterium_tuberculosis_str._Beijing/NITR203 1
Mycobacterium_tuberculosis_UT205 1
Mycobacterium_tuberculosis_RGTB327 1
Mycobacterium_tuberculosis_CTRI-2 1
Mycobacterium_tuberculosis_str._Erdman_=_ATCC_35801 1
Mycobacterium_tuberculosis_KZN_605 1
Mycobacterium_tuberculosis_KZN_4207 1
Mycobacterium_tuberculosis_CCDC5180 1
Mycobacterium_tuberculosis_CCDC5079 1
Mycobacterium_tuberculosis_CCDC5079 1
Mycobacterium_tuberculosis_H37Ra 1
Mycobacterium_tuberculosis_str._Haarlem/NITR202 1
Mycobacterium_tuberculosis_str._Haarlem 1
Mycobacterium_tuberculosis_F11 1
Mycobacterium_tuberculosis_H37Rv 1
Mycobacterium_tuberculosis_CDC1551 1
Mycobacterium_bovis_AF2122/97 1
Mycobacterium_bovis_BCG_str._Korea_1168P 1
Mycobacterium_bovis_BCG_str._Mexico 1
Mycobacterium_bovis_BCG_str._Tokyo_172 1
Mycobacterium_leprae_TN 1
Mycobacterium_kansasii_ATCC_12478 3
Corynebacterium_halotolerans_YIM_70093_=_DSM_44683 1
Corynebacterium_terpenotabidum_Y-11 1
Corynebacterium_ulcerans_809 1
Corynebacterium_urealyticum_DSM_7111 1
Corynebacterium_pseudotuberculosis_Cp162 2
Corynebacterium_pseudotuberculosis_P54B96 1
Corynebacterium_pseudotuberculosis_267 1
Corynebacterium_pseudotuberculosis_1/06-A 1
Corynebacterium_pseudotuberculosis_42/02-A 1
Corynebacterium_pseudotuberculosis_3/99-5 1
Corynebacterium_pseudotuberculosis_CIP_52.97 1
Corynebacterium_pseudotuberculosis_PAT10 1
Corynebacterium_pseudotuberculosis_I19 1
Corynebacterium_pseudotuberculosis_FRC41 1
Corynebacterium_pseudotuberculosis_C231 1
Corynebacterium_pseudotuberculosis_1002 1
Clavibacter_michiganensis_subsp._nebraskensis_NCPPB_2581 1
Bifidobacterium_thermophilum_RBL67 1
Bifidobacterium_breve_UCC2003 1
Bifidobacterium_asteroides_PRL2011 1
Actinomyces_graevenitzii_C83_ 1
Actinomyces_odontolyticus_ATCC_17982 1
Actinomyces_viscosus_C505 3
Desulfitobacterium_hafniense_DCB-2 1
Desulfotomaculum_gibsoniae_DSM_7213 1
Lactobacillus_rhamnosus_LOCK908 1
Lactobacillus_rhamnosus_ATCC_8530 1
Lactococcus_lactis_subsp._lactis_IO-1 1
Lactococcus_lactis_subsp._lactis_CV56 1
Lactococcus_lactis_subsp._lactis_Il1403 1
Streptococcus_suis_D12 1
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_Tc-4-1 1
Paenibacillus_sp._Y412MC10 1
Paenibacillus_mucilaginosus_KNP414 1
Paenibacillus_mucilaginosus_K02 1
Geobacillus_sp._C56-T3 2
Geobacillus_sp._Y4.1MC1 2
Geobacillus_sp._Y412MC52 2
Geobacillus_sp._Y412MC61 2
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 2
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 2
Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3 2
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 2
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5113 2
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5036 2
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 2
Bacillus_amyloliquefaciens_LFB112 2
Bacillus_amyloliquefaciens_CC178 2
Bacillus_amyloliquefaciens_Y2 1
Bacillus_amyloliquefaciens_IT-45 2
Bacillus_amyloliquefaciens_XH7 1
Bacillus_amyloliquefaciens_LL3 1
Bacillus_amyloliquefaciens_TA208 2
Bacillus_amyloliquefaciens_DSM_7 2
Bacillus_licheniformis_9945A 1
Bacillus_subtilis_PY79 1
Bacillus_subtilis_XF-1 1
Bacillus_subtilis_QB928 1
Bacillus_subtilis_BSn5 1
Bacillus_subtilis_subsp._subtilis_str._BAB-1 2
Bacillus_subtilis_subsp._subtilis_str._BSP1 2
Bacillus_subtilis_subsp._subtilis_6051-HGW 1
Bacillus_subtilis_subsp._spizizenii_TU-B-10 1
Bacillus_subtilis_subsp._spizizenii_str._W23 1
Bacillus_licheniformis_DSM_13_=_ATCC_14580 2
Bacillus_infantis_NRRL_B-14911 1
Bacillus_cereus_subsp._cytotoxis_NVH_391-98 3
Bacillus_toyonensis_BCT-7112 1
Bacillus_thuringiensis_HD-771 2
Bacillus_thuringiensis_HD-789 2
Bacillus_thuringiensis_MC28 2
Bacillus_thuringiensis_serovar_chinensis_CT-43 1
Bacillus_thuringiensis_YBT-1518 2
Bacillus_thuringiensis_Bt407 1
Bacillus_thuringiensis_serovar_konkukian_str._97-27 2
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 2
Bacillus_thuringiensis_BMB171 2
Bacillus_thuringiensis_serovar_finitimus_YBT-020 2
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 1
Bacillus_cereus_FRI-35 2
Bacillus_cereus_biovar_anthracis_str._CI 2
Bacillus_cereus_AH820 2
Bacillus_cereus_AH187 1
Bacillus_cereus_B4264 2
Bacillus_cereus_G9842 2
Bacillus_cereus_Q1 1
Bacillus_cereus_F837/76 2
Bacillus_cereus_NC7401 1
Bacillus_cereus_E33L 2
Bacillus_cereus_ATCC_14579 1
Bacillus_cereus_ATCC_10987 1
Bacillus_anthracis_str._H9401 2
Bacillus_anthracis_str._CDC_684 2
Bacillus_anthracis_str._'Ames_Ancestor' 2
Bacillus_anthracis_str._Sterne 2
Bacillus_anthracis_str._Ames 2
Bacillus_megaterium_WSH-002 1
Bacillus_megaterium_QM_B1551 1
Bacillus_coagulans_36D1 1
Staphylococcus_aureus_subsp._aureus_MSHR1132 1
Staphylococcus_pseudintermedius_ED99 1
Staphylococcus_pasteuri_SP1 1
Staphylococcus_lugdunensis_N920143 1
Staphylococcus_warneri_SG1 1
Staphylococcus_epidermidis_ATCC_12228 1
Staphylococcus_aureus_CA-347 1
Staphylococcus_aureus_Bmb9393 1
Staphylococcus_aureus_M1 1
Staphylococcus_aureus_08BA02176 1
Staphylococcus_aureus_ST228/18412 1
Staphylococcus_aureus_ST228/18341 1
Staphylococcus_aureus_ST228/16125 1
Staphylococcus_aureus_ST228/16035 1
Staphylococcus_aureus_ST228/15532 1
Staphylococcus_aureus_ST228/10497 1
Staphylococcus_aureus_ST228/10388 1
Staphylococcus_aureus_04-02981 1
Staphylococcus_aureus_RF122 1
Staphylococcus_aureus_subsp._aureus_Z172 1
Staphylococcus_aureus_subsp._aureus_6850 2
Staphylococcus_aureus_subsp._aureus_SA957 1
Staphylococcus_aureus_subsp._aureus_SA40 1
Staphylococcus_aureus_subsp._aureus_11819-97 1
Staphylococcus_aureus_subsp._aureus_M013 2
Staphylococcus_aureus_subsp._aureus_HO_5096_0412 1
Staphylococcus_aureus_subsp._aureus_VC40 1
Staphylococcus_aureus_subsp._aureus_T0131 1
Staphylococcus_aureus_subsp._aureus_LGA251 1
Staphylococcus_aureus_subsp._aureus_ECT-R_2 1
Staphylococcus_aureus_subsp._aureus_JKD6159 1
Staphylococcus_aureus_subsp._aureus_ED133 1
Staphylococcus_aureus_subsp._aureus_ED98 1
Staphylococcus_aureus_subsp._aureus_TW20 1
Staphylococcus_aureus_subsp._aureus_55/2053 1
Staphylococcus_aureus_subsp._aureus_TCH60 2
Staphylococcus_aureus_subsp._aureus_str._JKD6008 1
Staphylococcus_aureus_subsp._aureus_71193 1
Staphylococcus_aureus_subsp._aureus_S0385 1
Staphylococcus_aureus_subsp._aureus_str._Newman 1
Staphylococcus_aureus_subsp._aureus_Mu3 1
Staphylococcus_aureus_subsp._aureus_USA300_TCH1516 1
Staphylococcus_aureus_subsp._aureus_USA300_FPR3757 1
Staphylococcus_aureus_subsp._aureus_JH9 1
Staphylococcus_aureus_subsp._aureus_MSSA476 1
Staphylococcus_aureus_subsp._aureus_MRSA252 2
Staphylococcus_aureus_subsp._aureus_MW2 1
Staphylococcus_aureus_subsp._aureus_N315 1
Staphylococcus_aureus_subsp._aureus_Mu50 1
Staphylococcus_aureus_subsp._aureus_COL 1
Staphylococcus_aureus_subsp._aureus_NCTC_8325 1
Bacteroides_xylanisolvens_XB1A 1
Chlamydia_pecorum_PV3056/3 1
Chlamydophila_pneumoniae_LPCoLN 1
Chlamydophila_pneumoniae_J138 1
Chlamydophila_pneumoniae_CWL029 1
Chlamydophila_pneumoniae_AR39 1
Chlamydia_psittaci_01DC12 2
Chlamydia_psittaci_WC 2
Chlamydia_psittaci_M56 1
Chlamydia_psittaci_WS/RT/E30 1
Chlamydia_psittaci_VS225 2
Chlamydia_psittaci_MN 1
Chlamydia_psittaci_GR9 1
Chlamydia_psittaci_84/55 1
Chlamydia_psittaci_08DC60 2
Chlamydia_psittaci_02DC15 2
Chlamydia_psittaci_C19/98 2
Chlamydia_psittaci_NJ1 2
Chlamydia_psittaci_CP3 1
Chlamydophila_psittaci_RD1 2
Chlamydia_psittaci_Mat116 2
Chlamydophila_psittaci_6BC 2
Chlamydophila_psittaci_6BC 2
Chlamydia_trachomatis_C/TW-3 1
Chlamydia_trachomatis_L2/434/Bu(f) 1
Chlamydia_trachomatis_L2/434/Bu(i) 1
Chlamydia_trachomatis_IU888 1
Chlamydia_trachomatis_IU824 1
Chlamydia_trachomatis_L2b/Canada2 1
Chlamydia_trachomatis_L2b/Canada1 1
Chlamydia_trachomatis_L3/404/LN 1
Chlamydia_trachomatis_L2b/Ams5 1
Chlamydia_trachomatis_L2b/Ams4 1
Chlamydia_trachomatis_L2b/Ams3 1
Chlamydia_trachomatis_L2b/Ams2 1
Chlamydia_trachomatis_L2b/Ams1 1
Chlamydia_trachomatis_L2b/795 1
Chlamydia_trachomatis_L2b/CV204 1
Chlamydia_trachomatis_L2b/LST 1
Chlamydia_trachomatis_L2b/UCH-2 1
Chlamydia_trachomatis_L2b/8200/07 1
Chlamydia_trachomatis_L2/25667R 1
Chlamydia_trachomatis_L1/224 1
Chlamydia_trachomatis_L1/115 1
Chlamydia_trachomatis_L1/440/LN 1
Chlamydia_trachomatis_K/SotonK1 1
Chlamydia_trachomatis_Ia/SotonIa3 1
Chlamydia_trachomatis_Ia/SotonIa1 1
Chlamydia_trachomatis_G/SotonG1 1
Chlamydia_trachomatis_F/SotonF3 1
Chlamydia_trachomatis_F/SW5 1
Chlamydia_trachomatis_F/SW4 1
Chlamydia_trachomatis_E/SotonE8 1
Chlamydia_trachomatis_E/SotonE4 1
Chlamydia_trachomatis_E/SW3 1
Chlamydia_trachomatis_D/SotonD6 1
Chlamydia_trachomatis_D/SotonD5 1
Chlamydia_trachomatis_D/SotonD1 1
Chlamydia_trachomatis_A/5291 1
Chlamydia_trachomatis_A/363 1
Chlamydia_trachomatis_RC-J/971 1
Chlamydia_trachomatis_RC-L2/55 1
Chlamydia_trachomatis_J/6276tet1 1
Chlamydia_trachomatis_RC-J/966 1
Chlamydia_trachomatis_RC-J(s)/122 1
Chlamydia_trachomatis_RC-F(s)/342 1
Chlamydia_trachomatis_RC-L2(s)/3 1
Chlamydia_trachomatis_RC-J/953 1
Chlamydia_trachomatis_RC-J943 1
Chlamydia_trachomatis_RC-Fs852 1
Chlamydia_trachomatis_RC-L2s46 1
Chlamydia_trachomatis_RC-F69 1
Chlamydia_trachomatis_L2c 1
Chlamydia_trachomatis_D-LC 1
Chlamydia_trachomatis_D-EC 1
Chlamydia_trachomatis_G/9301 1
Chlamydia_trachomatis_G/11074 1
Chlamydia_trachomatis_G/11222 1
Chlamydia_trachomatis_G/9768 1
Chlamydia_trachomatis_E/150 1
Chlamydia_trachomatis_E/11023 1
Chlamydia_trachomatis_B/TZ1A828/OT 1
Chlamydia_trachomatis_Sweden2 1
Chlamydia_trachomatis_E/Bour 1
Chlamydia_trachomatis_A2497 1
Chlamydia_trachomatis_A2497 1
Chlamydia_trachomatis_L2b/UCH-1/proctitis 1
Chlamydia_trachomatis_434/Bu 1
Chlamydia_trachomatis_A/HAR-13 1
Chlamydia_trachomatis_D/UW-3/CX 1
Singulisphaera_acidiphila_DSM_18658 1
Lawsonia_intracellularis_N343 1
Geobacter_sulfurreducens_PCA 1
Pandoraea_pnomenusa_3kgm 2
Ralstonia_pickettii_12J 2
Ralstonia_solanacearum_FQY_4 1
Ralstonia_solanacearum_Po82 1
Ralstonia_solanacearum_PSI07 2
Ralstonia_solanacearum_CMR15 2
Ralstonia_solanacearum_GMI1000 1
Burkholderia_sp._YI23 2
Burkholderia_sp._CCGE1003 2
Burkholderia_sp._CCGE1001 1
Burkholderia_sp._KJ006 3
Burkholderia_thailandensis_MSMB121 1
Burkholderia_pseudomallei_MSHR305 2
Burkholderia_pseudomallei_NCTC_13179 1
Burkholderia_pseudomallei_BPC006 2
Burkholderia_pseudomallei_1026b 2
Burkholderia_pseudomallei_MSHR346 1
Burkholderia_pseudomallei_668 1
Burkholderia_pseudomallei_1710b 4
Burkholderia_pseudomallei_K96243 1
Burkholderia_mallei_NCTC_10229 1
Burkholderia_mallei_NCTC_10247 1
Burkholderia_mallei_ATCC_23344 1
Burkholderia_lata 2
Burkholderia_ambifaria_MC40-6 1
Burkholderia_cenocepacia_MC0-3 1
Burkholderia_cenocepacia_AU_1054 2
Burkholderia_cenocepacia_J2315 1
Burkholderia_multivorans_ATCC_17616 1
Burkholderia_cepacia_GG4 1
Alicycliphilus_denitrificans_BC 1
Variovorax_paradoxus_B4 1
Variovorax_paradoxus_EPS 2
Bordetella_parapertussis_Bpp5 1
Bordetella_bronchiseptica_MO149 1
Bordetella_bronchiseptica_253 1
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 2
Caulobacter_crescentus_CB15 2
Zymomonas_mobilis_subsp._pomaceae_ATCC_29192 1
Leisingera_methylohalidivorans_DSM_14336 1
Paracoccus_aminophilus_JCM_7686 4
Rhodospirillum_rubrum_ATCC_11170 2
Gluconacetobacter_diazotrophicus_PAl_5 1
Acetobacter_pasteurianus_IFO_3283-12 1
Acetobacter_pasteurianus_IFO_3283-01-42C 1
Acetobacter_pasteurianus_IFO_3283-32 1
Acetobacter_pasteurianus_IFO_3283-26 1
Acetobacter_pasteurianus_IFO_3283-22 1
Acetobacter_pasteurianus_IFO_3283-07 1
Acetobacter_pasteurianus_IFO_3283-03 1
Methylobacterium_extorquens_PA1 1
Brucella_ceti_TE10759-12 1
Brucella_ceti_TE28753-12 1
Brucella_canis_HSK_A52141 1
Brucella_suis_VBI22 1
Brucella_suis_1330 1
Brucella_suis_1330 1
Brucella_melitensis_NI 1
Brucella_melitensis_M5-90 1
Brucella_melitensis_M28 1
Brucella_melitensis_bv._1_str._16M 1
Brucella_abortus_A13334 0
Brucella_abortus_bv._1_str._9-941 0
Sinorhizobium_fredii_USDA_257 1
Sinorhizobium_fredii_HH103 4
Sinorhizobium_meliloti_2011 3
Sinorhizobium_meliloti_GR4 4
Sinorhizobium_meliloti_Rm41 3
Sinorhizobium_meliloti_SM11 3
Sinorhizobium_meliloti_BL225C 3
Sinorhizobium_meliloti_1021 3
Rhizobium_etli_CFN_42 3
Rhizobium_etli_bv._mimosae_str._Mim1 1
Rhizobium_tropici_CIAT_899 2
Rhizobium_leguminosarum_bv._trifolii_WSM2304 1
Rhizobium_leguminosarum_bv._trifolii_WSM1325 1
Hyphomicrobium_nitrativorans_NL23 1
Rhodopseudomonas_palustris_TIE-1 1
Rhodopseudomonas_palustris_HaA2 1
Rhodopseudomonas_palustris_BisB18 1
Rhodopseudomonas_palustris_CGA009 2
Bradyrhizobium_sp._S23321 2
Bradyrhizobium_sp._BTAi1 1
Bradyrhizobium_oligotrophicum_S58 2
Bradyrhizobium_japonicum_USDA_6 2
Bartonella_vinsonii_subsp._berkhoffii_str._Winnie 1
Mannheimia_succiniciproducens_MBEL55E 1
Actinobacillus_suis_H91-0380 1
Actinobacillus_pleuropneumoniae_serovar_3_str._JL03 1
Actinobacillus_pleuropneumoniae_serovar_7_str._AP76 1
Vibrio_sp._EJY3 1
Vibrio_vulnificus_YJ016 2
Glaciecola_psychrophila_170 1
Alteromonas_macleodii_str._'English_Channel_673' 1
Alteromonas_macleodii_str._'Black_Sea_11' 1
Alteromonas_macleodii_ATCC_27126 1
Alcanivorax_dieselolei_B5 1
Stenotrophomonas_maltophilia_D457 1
Stenotrophomonas_maltophilia_JV3 1
Stenotrophomonas_maltophilia_R551-3 1
Xanthomonas_citri_subsp._citri_Aw12879 2
Xanthomonas_campestris_pv._vesicatoria_str._85-10 2
Xanthomonas_axonopodis_pv._citrumelo_F1 1
Xanthomonas_axonopodis_Xac29-1 2
Xanthomonas_oryzae_pv._oryzicola_BLS256 1
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 1
Xanthomonas_oryzae_pv._oryzae_KACC_10331 2
Xanthomonas_campestris_pv._raphani_756C 1
Xanthomonas_campestris_pv._campestris_str._8004 1
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 1
Edwardsiella_tarda_C07-087 1
Edwardsiella_tarda_FL6-60 1
Serratia_sp._AS13 1
Serratia_plymuthica_S13 2
Serratia_plymuthica_4Rx13 2
Dickeya_dadantii_Ech586 1
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 1
Pantoea_ananatis_LMG_5342 1
Cronobacter_sakazakii_CMCC_45402 1
Cronobacter_sakazakii_SP291 1
Cronobacter_sakazakii_ATCC_BAA-894 2
Raoultella_ornithinolytica_B6 1
Shigella_flexneri_2002017 1
Salmonella_enterica_subsp._enterica_serovar_Agona_str._24249 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._B182 1
Klebsiella_oxytoca_KCTC_1686 2
Klebsiella_pneumoniae_JM45 2
Klebsiella_pneumoniae_CG43 2
Klebsiella_pneumoniae_KCTC_2242 2
Klebsiella_pneumoniae_342 2
Klebsiella_pneumoniae_subsp._pneumoniae_1084 2
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 1
Klebsiella_pneumoniae_subsp._rhinoscleromatis_SB3432 1
Enterobacter_aerogenes_EA1509E 1
Escherichia_coli_str._'clone_D_i2' 2
Escherichia_coli_str._'clone_D_i14' 2
Escherichia_coli_UTI89 1
Escherichia_coli_CFT073 2
Enterobacter_cloacae_SCF1 1
Enterobacter_cloacae_EcWSU1 1
Enterobacter_cloacae_subsp._cloacae_ENHKU01 1
Enterobacter_cloacae_subsp._cloacae_NCTC_9394 1
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 1
Pseudomonas_syringae_pv._phaseolicola_1448A 4
Pseudomonas_syringae_pv._syringae_B728a 2
Pseudomonas_stutzeri_CCUG_29243 1
Pseudomonas_monteilii_SB3101 1
Pseudomonas_monteilii_SB3078 1
Pseudomonas_putida_H8234 2
Pseudomonas_putida_HB3267 1
Pseudomonas_putida_NBRC_14164 2
Pseudomonas_putida_DOT-T1E 1
Pseudomonas_putida_S16 2
Pseudomonas_putida_BIRD-1 1
Pseudomonas_putida_W619 1
Pseudomonas_protegens_CHA0 2
Pseudomonas_fluorescens_F113 1
Pseudomonas_fluorescens_A506 2
Pseudomonas_fluorescens_R124 3
Pseudomonas_fluorescens_Pf0-1 1
Acinetobacter_sp.__SH024 1
Acinetobacter_calcoaceticus_ruh2202 1
Acinetobacter_baumannii_ZW85-1 1
Acinetobacter_baumannii_TYTH-1 1
Acinetobacter_baumannii_TCDC-AB0715 1
Acinetobacter_baumannii_D1279779 1
Acinetobacter_baumannii_MDR-TJ 1
Acinetobacter_baumannii_ACICU 1
Acinetobacter_radioresistens__SH164 1
Acinetobacter_johnsonii__SH046 1
Acinetobacter_lwoffii__SH145 1
Methylophaga_sp._JAM7 1
Candidatus_Methanomassiliicoccus_intestinalis_Issoire-Mx1 1
Ferroplasma_acidarmanus_fer1 2

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   33
Pan_troglodytes_69_2.1.4   (Chimpanzee)   25
Gorilla_gorilla_69_3.1   (Western gorilla)   31
Pongo_abelii_69_2   (Sumatran orangutan)   22
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   26
Macaca_mulatta_69_1   (Rhesus monkey)   22
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   30
Otolemur_garnettii_69_3   (Small-eared galago)   32
Microcebus_murinus_69_1   (Gray mouse lemur)   10
Rattus_norvegicus_69_3.4   (Norway rat)   36
Mus_musculus_69_38   (House mouse)   36
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   16
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   30
Cavia_porcellus_69_3   (Domestic guinea pig)   20
Oryctolagus_cuniculus_69_2   (Rabbit)   26
Ochotona_princeps_69   (American pika)   17
Tupaia_belangeri_69   (Northern tree shrew)   8
Sus_scrofa_69_10.2   (Pig)   30
Bos_taurus_69_3.1   (Cattle)   32
Vicugna_pacos_69_1   (Alpaca)   10
Tursiops_truncatus_69_1   (Bottlenose dolphin)   24
Mustela_putorius_furo_69_1.0   (Domestic ferret)   33
Ailuropoda_melanoleuca_69_1   (Giant panda)   27
Canis_familiaris_69_3.1   (Dog)   30
Felis_catus_69   (Domestic cat)   8
Equus_caballus_69_2   (Horse)   22
Myotis_lucifugus_69_2.0   (Little brown bat)   17
Pteropus_vampyrus_69_1   (Large flying fox)   21
Sorex_araneus_69_1   (European shrew)   13
Erinaceus_europaeus_69   (Western European hedgehog)   9
Procavia_capensis_69_1   (Cape rock hyrax)   21
Loxodonta_africana_69_3   (African savanna elephant)   24
Echinops_telfairi_69   (Small Madagascar hedgehog)   12
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   5
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   7
Macropus_eugenii_69_1.0   (Tammar wallaby)   10
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   20
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   25
Ornithorhynchus_anatinus_69_5   (Platypus)   11
Petromyzon_marinus_69_7.0   (Sea lamprey)   4
Meleagris_gallopavo_69_2   (Turkey)   18
Gallus_gallus_69_2   (Chicken)   15
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   12
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   16
Anolis_carolinensis_69_2.0   (Green anole)   23
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   23
Latimeria_chalumnae_69_1   (Coelacanth)   26
Gadus_morhua_69_1   (Atlantic cod)   20
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   25
Takifugu_rubripes_69_4   (Torafugu)   38
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   29
Oryzias_latipes_69_1   (Japanese medaka)   30
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   30
Oreochromis_niloticus_69_1.0   (Nile tilapia)   46
Danio_rerio_69_9   (Zebrafish)   43
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   7
Ciona_intestinalis_69   (Vase tunicate)   12
Drosophila_melanogaster_69_5   (Fruit fly)   50
Caenorhabditis_elegans_69_215   (Roundworm)   41
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   48
Arabidopsis_thaliana_10   (Thale cress)   36

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   54
Homo_sapiens__(NCBI_version)   (Human)   38
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   36
Loa_loa_v3.3_(Request)   (Eye worm)   14
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   5
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   12
Picea_sitchensis__(Incomplete)   (Sitka spruce)   3
Lotus_japonicus__(Early_assembly) 20
Malus_x_domestica_(Duplicate)   (Apple)   81
Ricinus_communis__(Early_assembly)   (Castor bean)   34
Nicotiana_benthamiana_0.4.4_(Early_draft) 59
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   45
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   49
Phoenix_dactylifera__(Early_draft)   (Date palm)   4
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 1
NCBI_plasmid_sequences_(Plasmids) 41
Protozoadb_2010_08_(Protozoadb) 200
STRING_v9.0.5_(STRING) 4780
Uniprot_2018_03_genome 398765
NCBI_2017_08_genome 84915
Protein_Data_Bank_(all_PDB_sequenc) 2
TargetDB__(Targets) 59

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.