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Domain combinations for _gap_,103657,50044 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

103657 - BAR/IMD domain-like
50044 - SH3-domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   0
Microcebus_murinus_76_1   (Gray mouse lemur)   0
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   0
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   0
Ochotona_princeps_76   (American pika)   0
Tupaia_belangeri_76   (Northern tree shrew)   0
Vicugna_pacos_76_1   (Alpaca)   0
Tursiops_truncatus_76_1   (Bottlenose dolphin)   0
Pteropus_vampyrus_76_1   (Large flying fox)   0
Sorex_araneus_76_1   (European shrew)   0
Procavia_capensis_76_1   (Cape rock hyrax)   0
Loxodonta_africana_76_3   (African savanna elephant)   0
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   0
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   0
Oreochromis_niloticus_76_1.0   (Nile tilapia)   0
Camponotus_floridanus_v3.3   (Florida carpenter ant)   1
Meloidogyne_incognita_   (Southern root-knot nematode)   1
Proterospongia_sp._ATCC_50818_ 1
Lodderomyces_elongisporus_NRRL_YB-4239_ 1
Pichia_stipitis_CBS_6054_ 1
Candida_guilliermondii_ATCC_6260_ 1
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 1
Debaromyces_hansenii 1
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 1
Lachancea_kluyveri_ 1
Ashbya_gossypii_ATCC_10895_ 1
Allomyces_macrogynus_ATCC_38327_ 0
Carica_papaya_   (Papaya)   1
Malus_domestica_v196   (Apple)   1
Actinidia_chinensis_Hongyang_ 1
Oryza_punctata_22 1
Panicum_virgatum_v202   (Switchgrass)   1
Setaria_italica_v164   (Foxtail millet)   1
Zea_mays_subsp._mays_   (Maize)   1
Zea_mays_v181   (Maize)   1
Musa_balbisiana   (Balbis banana)   1
Musa_acuminata_22   (Wild Malaysian banana)   1
Perkinsus_marinus_ATCC_50983_ 0
Trichomonas_vaginalis_ 0

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   0
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   0
Microcebus_murinus_69_1   (Gray mouse lemur)   0
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   0
Ochotona_princeps_69   (American pika)   0
Tupaia_belangeri_69   (Northern tree shrew)   0
Vicugna_pacos_69_1   (Alpaca)   0
Tursiops_truncatus_69_1   (Bottlenose dolphin)   0
Pteropus_vampyrus_69_1   (Large flying fox)   0
Sorex_araneus_69_1   (European shrew)   0
Procavia_capensis_69_1   (Cape rock hyrax)   0
Loxodonta_africana_69_3   (African savanna elephant)   0
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   0
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   0
Oreochromis_niloticus_69_1.0   (Nile tilapia)   0

Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   0
Malus_x_domestica_(Duplicate)   (Apple)   1
Protozoadb_2010_08_(Protozoadb) 0
STRING_v9.0.5_(STRING) 5
NCBI_2017_08_genome 70
Uniprot_2018_03_genome 390

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