SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,110296,110296,63446 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

110296 - Oligoxyloglucan reducing end-specific cellobiohydrolase
110296 - Oligoxyloglucan reducing end-specific cellobiohydrolase
63446 - Type I dockerin domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Clostridium_clariflavum_DSM_19732 1
Clostridium_cellulolyticum_H10 1
Clostridium_thermocellum_ATCC_27405 1
Clostridium_sp._BNL1100 1
Clostridium_acetobutylicum_ATCC_824 1

Strains
Genome     Number
Clostridium_thermocellum_DSM_1313 1
Ruminococcus_champanellensis_18P13 1
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 1
Clostridium_acetobutylicum_DSM_1731 1
Clostridium_acetobutylicum_EA_2018 1

Others
Genome     Number
STRING_v9.0.5_(STRING) 3
Uniprot_2018_03_genome 342
NCBI_2017_08_genome 58

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