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Home > SCOP hierarchy > Domain combination - _gap_,117839,_gap_,56399

Domain combinations for _gap_,117839,_gap_,56399 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

117839 - WWE domain
56399 - ADP-ribosylation

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Ochotona_princeps_76 (American pika) 1

Sarcophilus_harrisii_76_7.0 (Tasmanian devil) 1

Gallus_gallus_76_4 (Chicken) 1

Anas_platyrhynchos_76_1.0 (Mallard) 1

Taeniopygia_guttata_76_3.2.4 (Zebra finch) 1

Ficedula_albicollis_76_1.0 (Collared flycatcher) 1

Pelodiscus_sinensis_76_1.0 (Chinese soft-shelled turtle) 3

Anolis_carolinensis_76_2.0 (Green anole) 1

Xenopus_tropicalis_76_4.2 (Tropical clawed frog) 1

Latimeria_chalumnae_76_1 (Coelacanth) 2

Lepisosteus_oculatus_76 (Spotted gar) 1

Poecilia_formosa_76 (Amazon molly) 2

Astyanax_mexicanus_76 (Mexican tetra) 1

Danio_rerio_76_9 (Zebrafish) 1

Crassostrea_gigas_22 (Pacific oyster) 1

Acropora_digitifera_v1.0 0

Amphimedon_queenslandica 1

Dictyostelium_discoideum 0

Dictyostelium_purpureum_ 0

Pinus_taeda (Loblolly pine) 0

Picea_abies (Norway spruce) 0

Theobroma_cacao_B97-61/B2_v1 (Cacao) 0

Gossypium_raimondii_v221 0

Medicago_truncatula_ (Barrel medic) 2

Cucumis_sativus_v122 (Cucumber) 1

Manihot_esculenta_v147 (Cassava) 3

Populus_trichocarpa_v156 (Black cottonwood) 0

Solanum_lycopersicum_v.2.3 (Tomato) 1

Solanum_tuberosum_ (Potato) 1

Triticum_urartu_22 0

Triticum_aestivum_22 (Bread wheat) 0

Musa_acuminata_22 (Wild Malaysian banana) 1

Bigelowiella_natans_CCMP2755_22 2

Aureococcus_anophagefferens_ 0

Perkinsus_marinus_ATCC_50983_ 1

Symbiodinium_minutum_clade_B1_v1.2 6

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Strains
Genome Number

Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2) (Tropical clawed frog) 2

Theobroma_cacao_Matina_1-6_v0.9 (Cacao) 0

Longest transcript per gene
Genome Number

Ochotona_princeps_69 (American pika) 1

Felis_catus_69 (Domestic cat) 1

Sarcophilus_harrisii_69_7.0 (Tasmanian devil) 1

Gallus_gallus_69_2 (Chicken) 1

Taeniopygia_guttata_69_3.2.4 (Zebra finch) 1

Pelodiscus_sinensis_69_1.0 (Chinese soft-shelled turtle) 3

Anolis_carolinensis_69_2.0 (Green anole) 1

Xenopus_tropicalis_69_4.2 (Tropical clawed frog) 1

Latimeria_chalumnae_69_1 (Coelacanth) 1

Danio_rerio_69_9 (Zebrafish) 1

Others
Genome Number

Nicotiana_benthamiana_0.4.4_(Early_draft) 0

Solanum_pimpinellifolium_A-1.0_(Early_draft) (Currant tomato) 0

Solanum_lycopersicum_v2.3_(Early_assembly) (Tomato) 1

STRING_v9.0.5_(STRING) 4

Uniprot_2018_03_genome 846

NCBI_2017_08_genome 287

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