SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain combinations for _gap_,141571 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

141571 - Pentapeptide repeat-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Jump to [ Top of page · Domain combinations in individual genomes ]

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   0
Pan_troglodytes_76_2.1.4   (Chimpanzee)   0
Gorilla_gorilla_76_3.1   (Western gorilla)   0
Pongo_abelii_76_2   (Sumatran orangutan)   0
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   0
Papio_anubis_76   (Olive baboon)   0
Macaca_mulatta_76_1   (Rhesus monkey)   0
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   0
Otolemur_garnettii_76_3   (Small-eared galago)   0
Microcebus_murinus_76_1   (Gray mouse lemur)   0
Rattus_norvegicus_76_5.0   (Norway rat)   0
Mus_musculus_76_38   (House mouse)   0
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   0
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   0
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   0
Cavia_porcellus_76_3   (Domestic guinea pig)   0
Oryctolagus_cuniculus_76_2   (Rabbit)   0
Ochotona_princeps_76   (American pika)   0
Tupaia_belangeri_76   (Northern tree shrew)   0
Sus_scrofa_76_10.2   (Pig)   0
Bos_taurus_76_3.1   (Cattle)   0
Ovis_aries_76_3.1   (Sheep)   1
Vicugna_pacos_76_1   (Alpaca)   0
Tursiops_truncatus_76_1   (Bottlenose dolphin)   0
Mustela_putorius_furo_76_1.0   (Domestic ferret)   0
Ailuropoda_melanoleuca_76_1   (Giant panda)   0
Canis_familiaris_76_3.1   (Dog)   0
Felis_catus_76_6.2   (Domestic cat)   0
Equus_caballus_76_2   (Horse)   0
Myotis_lucifugus_76_2.0   (Little brown bat)   0
Pteropus_vampyrus_76_1   (Large flying fox)   0
Sorex_araneus_76_1   (European shrew)   0
Erinaceus_europaeus_76   (Western European hedgehog)   0
Procavia_capensis_76_1   (Cape rock hyrax)   1
Echinops_telfairi_76   (Small Madagascar hedgehog)   0
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   1
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_76_1.0   (Tammar wallaby)   0
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   0
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   1
Ornithorhynchus_anatinus_76_5   (Platypus)   0
Saccoglossus_kowalevskii_v3.0 11
Meleagris_gallopavo_76_2   (Turkey)   0
Gallus_gallus_76_4   (Chicken)   0
Anas_platyrhynchos_76_1.0   (Mallard)   0
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   0
Ficedula_albicollis_76_1.0   (Collared flycatcher)   0
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   0
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   1
Oryzias_latipes_76_1   (Japanese medaka)   1
Astyanax_mexicanus_76   (Mexican tetra)   0
Danio_rerio_76_9   (Zebrafish)   0
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   1
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   2
Adineta_vaga 4
Octopus_bimaculoides_280 1
Lottia_gigantea_   (Owl limpet)   4
Helobdella_robusta_ 1
Capitella_sp._I_ 3
Bombyx_mori_   (Domestic silkworm)   1
Drosophila_pseudoobscura_2.13 1
Drosophila_melanogaster_76_5   (Fruit fly)   1
Drosophila_mojavensis_1.3 1
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   0
Rhodnius_prolixus_22 0
Daphnia_pulex_   (Common water flea)   1
Strigamia_maritima_22 0
Sarcoptes_scabiei 0
Meloidogyne_incognita_   (Southern root-knot nematode)   1
Onchocerca_volvulus_22 1
Caenorhabditis_japonica_ 5
Caenorhabditis_briggsae_2 1
Nematostella_vectensis_1.0   (Starlet sea anemone)   5
Hydra_vulgaris 1
Amphimedon_queenslandica 0
Proterospongia_sp._ATCC_50818_ 0
Monosiga_brevicollis_ 0
Sphaeroforma_arctica_JP610_ 0
Capsaspora_owczarzaki_ATCC_30864_ 0
Mortierella_verticillata_NRRL_6337_ 0
Phycomyces_blakesleeanus_ 1
Rhizopus_oryzae_RA_99-880_ 0
Rhodotorula_graminis_WP1_v1.0 0
Piloderma_croceum_F_1598_v1.0 0
Postia_placenta_ 1
Apiospora_montagnei_NRRL_25634_v1.0 0
Neurospora_tetrasperma_ 1
Trichoderma_asperellum_CBS_433.97_v1.0 1
Amorphotheca_resinae_v1.0   (Creosote fungus)   1
Cochliobolus_victoriae_FI3_v1.0 1
Zasmidium_cellare_ATCC_36951_v1.0 0
Dothistroma_septosporum 0
Septoria_musiva_v1.0 0
Ajellomyces_dermatitidis_SLH14081_ 0
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 0
Aspergillus_zonatus_v1.0 0
Aspergillus_nidulans_FGSC_A4_ 0
Aspergillus_sydowii_v1.0 0
Aspergillus_versicolor_v1.0 0
Aspergillus_oryzae_RIB40_ 0
Aspergillus_flavus_NRRL3357_ 0
Dekkera_bruxellensis_CBS_2499_v2.0 0
Lodderomyces_elongisporus_NRRL_YB-4239_ 0
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 0
Catenaria_anguillulae_PL171_v1.0 0
Dictyostelium_discoideum 1
Dictyostelium_purpureum_ 1
Entamoeba_invadens_1.2 3
Selaginella_moellendorffii_ 2
Pinus_taeda   (Loblolly pine)   1
Picea_abies   (Norway spruce)   1
Eucalyptus_grandis_v201   (Rose gum)   6
Theobroma_cacao_B97-61/B2_v1   (Cacao)   2
Gossypium_raimondii_v221 13
Citrus_clementina_v165 4
Citrus_sinensis_v154   (Sweet orange)   7
Thellungiella_halophila_v173 5
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   3
Capsella_rubella_v183 2
Arabidopsis_lyrata_   (Lyrate rockcress)   3
Arabidopsis_thaliana_10   (Thale cress)   6
Carica_papaya_   (Papaya)   0
Medicago_truncatula_   (Barrel medic)   2
Phaseolus_vulgaris_v186   (French bean)   2
Glycine_max_v109   (Soybean)   9
Cucumis_sativus_v122   (Cucumber)   4
Fragaria_vesca_   (Wild strawberry)   2
Malus_domestica_v196   (Apple)   7
Prunus_persica_v139   (Peach)   2
Linum_usitatissimum_v200   (Flax)   3
Manihot_esculenta_v147   (Cassava)   2
Populus_trichocarpa_v156   (Black cottonwood)   4
Vitis_vinifera_   (Wine grape)   3
Mimulus_guttatus_v140   (Spotted monkey flower)   2
Solanum_lycopersicum_v.2.3   (Tomato)   2
Solanum_tuberosum_   (Potato)   2
Actinidia_chinensis_Hongyang_ 0
Aquilegia_coerulea_v195 8
Triticum_urartu_22 1
Triticum_aestivum_22   (Bread wheat)   3
Aegilops_tauschii_22 2
Brachypodium_distachyon_   (Stiff brome)   2
Oryza_barthii_22   (African wild rice)   0
Oryza_meridionalis_22 2
Oryza_glumaepatula_22 2
Oryza_glaberrima   (African rice)   1
Oryza_punctata_22 1
Oryza_nivara_22 1
Oryza_brachyantha_22   (Malo sina)   1
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   2
Oryza_sativa_v193   (Rice)   2
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   2
Panicum_virgatum_v202   (Switchgrass)   2
Setaria_italica_v164   (Foxtail millet)   3
Zea_mays_subsp._mays_   (Maize)   3
Zea_mays_v181   (Maize)   2
Sorghum_bicolor_   (Sorghum)   2
Musa_balbisiana   (Balbis banana)   2
Musa_acuminata_22   (Wild Malaysian banana)   2
Amborella_trichopoda_22 2
Physcomitrella_patens 2
Coccomyxa_subellipsoidea_sp._C-169_v2 1
Chlorella_variabilis_sp._NC64A_ 1
Chlorella_vulgaris_ 2
Volvox_carteri_f._nagariensis_ 2
Volvox_carteri_v199 2
Chlamydomonas_reinhardtii_4.0 2
Ostreococcus_sp._RCC809_ 1
Bathycoccus_prasinos_ 4
Micromonas_sp._RCC299_ 2
Micromonas_pusilla_CCMP1545_v3.0 2
Cyanidioschyzon_merolae_strain_10D_22 4
Cyanidioschyzon_merolae 4
Porphyridium_purpureum_02_2012 7
Thecamonas_trahens_ATCC_50062_ 0
Bigelowiella_natans_CCMP2755_22 3
Cyanophora_paradoxa_ 2
Leishmania_mexicana_2.4 2
Leishmania_major_strain_Friedlin_ 2
Leishmania_infantum_JPCM5_2.4 2
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 2
Trypanosoma_vivax_ 2
Trypanosoma_cruzi_strain_CL_Brener 3
Trypanosoma_congolense_2.4 1
Trypanosoma_brucei_gambiense_v4.1 2
Trypanosoma_brucei_TREU927_v4.1 3
Ectocarpus_siliculosus 3
Aureococcus_anophagefferens_ 1
Phytophthora_ramorum_1.1   (Sudden oak death agent)   0
Phytophthora_sojae_1.1 0
Phaeodactylum_tricornutumCCAP_1055/1 1
Fragilariopsis_cylindrus 1
Thalassiosira_pseudonana_CCMP1335 2
Paramecium_tetraurelia_ 2
Tetrahymena_thermophila_SB210_1_ 0
Neospora_caninum 0
Toxoplasma_gondii_VEG 0
Toxoplasma_gondii_ME49 0
Theileria_annulata 0
Plasmodium_falciparum_3D7_ 0
Plasmodium_vivax_SaI-1_7.0 0
Plasmodium_knowlesi_strain_H_ 0
Plasmodium_yoelii_ssp._yoelii_1_ 0
Plasmodium_chabaudi_ 0
Plasmodium_berghei_ANKA_ 0
Symbiodinium_minutum_clade_B1_v1.2 1
Naegleria_gruberi_ 0
Guillardia_theta_CCMP2712_v1.0_ 3
Emiliania_huxleyi_CCMP1516_ 14
Leptolyngbya_sp._PCC_7376 2
Pseudanabaena_sp._PCC_7367 9
Acaryochloris_marina_MBIC11017 6
Synechocystis_sp._PCC_6803 1
Thermosynechococcus_sp._NK55 0
Thermosynechococcus_elongatus_BP-1 1
Synechococcus_sp._PCC_7502 1
Synechococcus_sp._PCC_6312 1
Synechococcus_sp._CC9311 1
Synechococcus_elongatus_PCC_7942 2
Microcoleus_sp._PCC_7113 8
Trichodesmium_erythraeum_IMS101 6
Geitlerinema_sp._PCC_7407 6
Cyanothece_sp._PCC_8802 2
Gloeocapsa_sp._PCC_7428 4
cyanobacterium_UCYN-A 0
Halothece_sp._PCC_7418 1
Microcystis_aeruginosa_NIES-843 2
Gloeobacter_violaceus_PCC_7421 4
Rivularia_sp._PCC_7116 8
Calothrix_sp._PCC_7507 2
Anabaena_variabilis_ATCC_29413 6
'Nostoc_azollae'_0708 2
Nostoc_sp._PCC_7107 4
Nostoc_punctiforme_PCC_73102 4
Nostoc_sp._PCC_7120 4
Nostoc_sp._PCC_7524 2
Anabaena_sp._90 1
Mycoplasma_leachii_99/014/6 1
Mycoplasma_mycoides_subsp._capri_LC_str._95010 0
Mycoplasma_bovis_HB0801 1
Mycoplasma_pulmonis_UAB_CTIP 0
Eggerthella_sp._YY7918 1
Eggerthella_lenta_DSM_2243 1
Thermobispora_bispora_DSM_43833 0
Nakamurella_multipartita_DSM_44233 1
Modestobacter_marinus 1
Geodermatophilus_obscurus_DSM_43160 2
Kineococcus_radiotolerans_SRS30216 1
Catenulispora_acidiphila_DSM_44928 3
Stackebrandtia_nassauensis_DSM_44728 2
Frankia_symbiont_of_Datisca_glomerata 2
Frankia_sp._EAN1pec 7
Frankia_alni_ACN14a 0
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 1
Thermomonospora_curvata_DSM_43183 0
Streptosporangium_roseum_DSM_43021 2
Kitasatospora_setae_KM-6054 3
Streptomyces_coelicolor_A3(2) 2
Streptomyces_sp._PAMC26508 1
Streptomyces_flavogriseus_ATCC_33331 2
Streptomyces_sp._SirexAA-E 1
Streptomyces_griseus_subsp._griseus_NBRC_13350 2
Streptomyces_bingchenggensis_BCW-1 2
Streptomyces_violaceusniger_Tu_4113 3
Streptomyces_avermitilis_MA-4680 2
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 3
Streptomyces_scabiei_87.22 3
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 1
Actinosynnema_mirum_DSM_43827 2
Saccharomonospora_viridis_DSM_43017 1
Pseudonocardia_dioxanivorans_CB1190 1
Saccharopolyspora_erythraea_NRRL_2338 3
Amycolatopsis_mediterranei_U32 3
Kribbella_flavida_DSM_17836 1
Nocardioides_sp._JS614 1
Microlunatus_phosphovorus_NM-1 2
Salinispora_arenicola_CNS-205 4
Salinispora_tropica_CNB-440 4
Verrucosispora_maris_AB-18-032 1
Micromonospora_sp._L5 1
Micromonospora_aurantiaca_ATCC_27029 2
Actinoplanes_sp._N902-109 3
Actinoplanes_sp._SE50/110 1
Actinoplanes_missouriensis_431 3
Gordonia_polyisoprenivorans_VH2 1
Rhodococcus_jostii_RHA1 3
Rhodococcus_equi_103S 2
Rhodococcus_erythropolis_PR4 2
Nocardia_cyriacigeorgica_GUH-2 1
Mycobacterium_vanbaalenii_PYR-1 0
Sanguibacter_keddieii_DSM_10542 2
Kytococcus_sedentarius_DSM_20547 1
Beutenbergia_cavernae_DSM_12333 2
Microbacterium_testaceum_StLB037 1
Cellulomonas_fimi_ATCC_484 1
Arthrobacter_phenanthrenivorans_Sphe3 1
Arthrobacter_chlorophenolicus_A6 1
Arthrobacter_aurescens_TC1 1
Kocuria_rhizophila_DC2201 1
Rothia_mucilaginosa_DY-18 0
Rothia_dentocariosa_ATCC_17931 0
Arthrobacter_sp._Rue61a 1
Arthrobacter_sp._FB24 1
Bifidobacterium_animalis_subsp._lactis_Bl-04 1
Bifidobacterium_dentium_Bd1 1
Actinomyces_sp._F0330 1
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 1
Sphaerobacter_thermophilus_DSM_20745 0
Herpetosiphon_aurantiacus_DSM_785 2
Deinococcus_gobiensis_I-0 1
Deinococcus_radiodurans_R1 1
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 2
Clostridium_clariflavum_DSM_19732 0
Eubacterium_siraeum 2
Clostridium_cellulolyticum_H10 1
Desulfosporosinus_acidiphilus_SJ4 2
Desulfosporosinus_orientis_DSM_765 2
Dehalobacter_sp._DCA 1
Dehalobacter_sp._CF 2
Syntrophobotulus_glycolicus_DSM_8271 0
Desulfitobacterium_dehalogenans_ATCC_51507 1
Desulfotomaculum_acetoxidans_DSM_771 0
Desulfotomaculum_ruminis_DSM_2154 1
Acetobacterium_woodii_DSM_1030 1
Eubacterium_limosum_KIST612 2
Clostridium_difficile_630 2
Clostridium_sticklandii_DSM_519 1
Clostridium_saccharolyticum_WM1 2
Clostridium_lentocellum_DSM_5427 1
Alkaliphilus_oremlandii_OhILAs 1
Alkaliphilus_metalliredigens_QYMF 1
Clostridium_sp._BNL1100 1
Clostridium_ljungdahlii_DSM_13528 2
Clostridium_beijerinckii_NCIMB_8052 5
Clostridium_tetani_E88 1
Clostridium_perfringens_ATCC_13124 1
Clostridium_cellulovorans_743B 2
Clostridium_botulinum_A_str._ATCC_3502 2
Clostridium_acetobutylicum_ATCC_824 2
Carnobacterium_sp._17-4 1
Carnobacterium_sp._WN1359 1
Exiguobacterium_sp._MH3 2
Exiguobacterium_sibiricum_255-15 2
Brevibacillus_brevis_NBRC_100599 3
Paenibacillus_sp._JDR-2 1
Paenibacillus_terrae_HPL-003 3
Paenibacillus_mucilaginosus_3016 1
Paenibacillus_polymyxa_M1 5
Listeria_welshimeri_serovar_6b_str._SLCC5334 1
Listeria_innocua_Clip11262 1
Listeria_seeligeri_serovar_1/2b_str._SLCC3954 1
Listeria_monocytogenes_serotype_4b_str._CLIP_80459 1
Listeria_ivanovii_subsp._ivanovii_PAM_55 1
Lysinibacillus_sphaericus_C3-41 3
Bacillus_sp._JS 2
Bacillus_sp._1NLA3E 1
Bacillus_amyloliquefaciens_FZB42 1
Bacillus_atrophaeus_1942 2
Bacillus_subtilis_subsp._subtilis_str._168 2
Bacillus_halodurans_C-125 1
Bacillus_weihenstephanensis_KBAB4 1
Bacillus_thuringiensis_str._Al_Hakam 1
Bacillus_cereus_03BB102 1
Bacillus_anthracis_str._A0248 1
Bacillus_pseudofirmus_OF4 1
Bacillus_clausii_KSM-K16 1
Bacillus_megaterium_DSM_319 1
Gemmatimonas_aurantiaca_T-27 1
Pelodictyon_phaeoclathratiforme_BU-1 0
Chlorobium_luteolum_DSM_273 0
Chlorobium_chlorochromatii_CaD3 0
Chlorobium_phaeobacteroides_DSM_266 0
Chlorobium_phaeovibrioides_DSM_265 0
Chlorobium_limicola_DSM_245 0
Chlorobaculum_parvum_NCIB_8327 0
Chlorobium_tepidum_TLS 0
Chloroherpeton_thalassium_ATCC_35110 0
Prosthecochloris_aestuarii_DSM_271 0
Haliscomenobacter_hydrossis_DSM_1100 2
Saprospira_grandis_str._Lewin 1
Niastella_koreensis_GR20-10 2
Salinibacter_ruber_M8 1
Marivirga_tractuosa_DSM_4126 1
Fibrella_aestuarina 1
Parabacteroides_distasonis_ATCC_8503 1
Bacteroides_thetaiotaomicron_VPI-5482 1
Bacteroides_fragilis_YCH46 1
Croceibacter_atlanticus_HTCC2559 1
Muricauda_ruestringensis_DSM_13258 0
Simkania_negevensis_Z 0
Coraliomargarita_akajimensis_DSM_45221 0
Brachyspira_murdochii_DSM_12563 1
Brachyspira_intermedia_PWS/A 2
Spirochaeta_smaragdinae_DSM_11293 1
Sphaerochaeta_pleomorpha_str._Grapes 2
Sphaerochaeta_globus_str._Buddy 1
Sphaerochaeta_coccoides_DSM_17374 1
Spirochaeta_caldaria_DSM_7334 1
Treponema_azotonutricium_ZAS-9 1
Treponema_primitia_ZAS-2 1
Treponema_brennaborense_DSM_12168 1
Treponema_succinifaciens_DSM_2489 1
Spirochaeta_africana_DSM_8902 1
Spirochaeta_thermophila_DSM_6192 1
Granulicella_tundricola_MP5ACTX9 1
Terriglobus_saanensis_SP1PR4 1
Candidatus_Nitrospira_defluvii 0
Leptospirillum_ferrooxidans_C2-3 0
Ilyobacter_polytropus_DSM_2926 1
Candidatus_Methylomirabilis_oxyfera 1
Helicobacter_cinaedi_PAGU611 1
Desulfarculus_baarsii_DSM_2075 1
Syntrophus_aciditrophicus_SB 0
Desulfomonile_tiedjei_DSM_6799 2
Desulfurivibrio_alkaliphilus_AHT2 0
Desulfotalea_psychrophila_LSv54 0
Desulfobulbus_propionicus_DSM_2032 1
Desulfatibacillum_alkenivorans_AK-01 0
Desulfobacterium_autotrophicum_HRM2 0
Desulfovibrio_piezophilus 0
Desulfovibrio_aespoeensis_Aspo-2 0
Desulfovibrio_magneticus_RS-1 0
Desulfovibrio_salexigens_DSM_2638 0
Desulfovibrio_africanus_str._Walvis_Bay 0
Geobacter_sp._M21 1
Geobacter_uraniireducens_Rf4 1
Geobacter_bemidjiensis_Bem 1
Geobacter_sulfurreducens_KN400 1
Geobacter_metallireducens_GS-15 1
Pelobacter_propionicus_DSM_2379 0
Haliangium_ochraceum_DSM_14365 0
Sorangium_cellulosum_'So_ce_56' 0
Anaeromyxobacter_dehalogenans_2CP-1 0
Corallococcus_coralloides_DSM_2259 0
Myxococcus_xanthus_DK_1622 0
Myxococcus_fulvus_HW-1 0
Dechloromonas_aromatica_RCB 1
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 0
Methylibium_petroleiphilum_PM1 1
Burkholderia_phytofirmans_PsJN 1
Burkholderia_xenovorans_LB400 1
Burkholderia_sp._RPE64 0
Burkholderia_sp._CCGE1002 1
Burkholderia_thailandensis_E264 0
Burkholderia_pseudomallei_1106a 0
Burkholderia_mallei_SAVP1 0
Burkholderia_glumae_BGR1 0
Polaromonas_naphthalenivorans_CJ2 0
Variovorax_paradoxus_S110 1
Acidovorax_avenae_subsp._avenae_ATCC_19860 0
Pusillimonas_sp._T7-7 0
Advenella_kashmirensis_WT001 0
Taylorella_asinigenitalis_MCE3 0
Taylorella_equigenitalis_MCE9 0
Bordetella_petrii_DSM_12804 0
Bordetella_parapertussis_12822 0
Bordetella_bronchiseptica_RB50 0
Achromobacter_xylosoxidans_A8 1
Achromobacter_xylosoxidans 1
Thiobacillus_denitrificans_ATCC_25259 1
Gallionella_capsiferriformans_ES-2 0
Methylotenera_versatilis_301 0
Magnetococcus_marinus_MC-1 0
Parvularcula_bermudensis_HTCC2503 1
Brevundimonas_subvibrioides_ATCC_15264 0
Caulobacter_crescentus_NA1000 0
Phenylobacterium_zucineum_HLK1 0
Erythrobacter_litoralis_HTCC2594 0
Novosphingobium_sp._PP1Y 1
Novosphingobium_aromaticivorans_DSM_12444 2
Sphingobium_sp._SYK-6 1
Sphingomonas_sp._MM-1 1
Sphingomonas_wittichii_RW1 1
Maricaulis_maris_MCS10 0
Dinoroseobacter_shibae_DFL_12 1
Phaeobacter_gallaeciensis_2.10 0
Pseudovibrio_sp._FO-BEG1 2
Jannaschia_sp._CCS1 0
Roseobacter_litoralis_Och_149 0
Roseobacter_denitrificans_OCh_114 0
Rhodobacter_capsulatus_SB_1003 1
Magnetospirillum_magneticum_AMB-1 0
Rhodospirillum_centenum_SW 0
Azospirillum_lipoferum_4B 1
Azospirillum_sp._B510 1
Azospirillum_brasilense_Sp245 0
Granulibacter_bethesdensis_CGDNIH1 0
Polymorphum_gilvum_SL003B-26A1 1
Micavibrio_aeruginosavorus_ARL-13 0
Candidatus_Midichloria_mitochondrii_IricVA 0
Neorickettsia_sennetsu_str._Miyayama 0
Neorickettsia_risticii_str._Illinois 0
Wolbachia_endosymbiont_of_Culex_quinquefasciatus_Pel 0
Wolbachia_sp._wRi 0
Ehrlichia_chaffeensis_str._Arkansas 0
Ehrlichia_canis_str._Jake 0
Ehrlichia_ruminantium_str._Gardel 0
Anaplasma_phagocytophilum_HZ 0
Anaplasma_marginale_str._Florida 0
Anaplasma_centrale_str._Israel 0
Orientia_tsutsugamushi_str._Boryong 0
Rickettsia_bellii_OSU_85-389 0
Rickettsia_canadensis_str._McKiel 0
Rickettsia_typhi_str._Wilmington 0
Rickettsia_prowazekii_str._BuV67-CWPP 0
Rickettsia_philipii_str._364D 0
Rickettsia_heilongjiangensis_054 0
Rickettsia_peacockii_str._Rustic 0
Rickettsia_felis_URRWXCal2 0
Rickettsia_slovaca_13-B 0
Rickettsia_parkeri_str._Portsmouth 0
Rickettsia_massiliae_MTU5 0
Rickettsia_japonica_YH 0
Rickettsia_africae_ESF-5 0
Rickettsia_rhipicephali_str._3-7-female6-CWPP 0
Rickettsia_montanensis_str._OSU_85-930 0
Candidatus_Rickettsia_amblyommii_str._GAT-30V 0
Rickettsia_australis_str._Cutlack 0
Rickettsia_akari_str._Hartford 0
Rickettsia_rickettsii_str._'Sheila_Smith' 0
Rickettsia_conorii_str._Malish_7 0
Methylobacterium_extorquens_AM1 0
Methylobacterium_sp._4-46 1
Methylobacterium_populi_BJ001 0
Methylobacterium_nodulans_ORS_2060 0
Methylobacterium_radiotolerans_JCM_2831 0
Parvibaculum_lavamentivorans_DS-1 1
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 1
Agrobacterium_tumefaciens_str._C58 1
Agrobacterium_radiobacter_K84 0
Agrobacterium_sp._H13-3 1
Agrobacterium_vitis_S4 1
Methylocella_silvestris_BL2 1
Rhodomicrobium_vannielii_ATCC_17100 1
Hyphomicrobium_sp._MC1 2
Hyphomicrobium_denitrificans_ATCC_51888 3
Bradyrhizobium_japonicum_USDA_110 1
Methylocystis_sp._SC2 2
Saccharophagus_degradans_2-40 0
Pasteurella_multocida_subsp._multocida_str._3480 1
Aeromonas_salmonicida_subsp._salmonicida_A449 0
Vibrio_parahaemolyticus_RIMD_2210633 0
Vibrio_splendidus_LGP32 0
Vibrio_vulnificus_MO6-24/O 0
Psychromonas_ingrahamii_37 0
Shewanella_piezotolerans_WP3 0
Shewanella_halifaxensis_HAW-EB4 1
Shewanella_pealeana_ATCC_700345 0
Shewanella_oneidensis_MR-1 1
Shewanella_baltica_OS185 1
Shewanella_woodyi_ATCC_51908 0
Shewanella_violacea_DSS12 0
Colwellia_psychrerythraea_34H 0
Glaciecola_sp._4H-3-7+YE-5 1
Marinobacter_adhaerens_HP15 1
Marinobacter_hydrocarbonoclasticus_ATCC_49840 1
Alteromonas_sp._SN2 0
Marinomonas_sp._MWYL1 0
Marinomonas_mediterranea_MMB-1 0
Methylomonas_methanica_MC09 0
Frateuria_aurantia_DSM_6220 0
Stenotrophomonas_maltophilia_K279a 1
Thioalkalivibrio_sp._K90mix 1
Halorhodospira_halophila_SL1 1
Nitrosococcus_watsonii_C-113 1
Nitrosococcus_halophilus_Nc4 1
Nitrosococcus_oceani_ATCC_19707 1
Coxiella_burnetii_Dugway_5J108-111 0
Legionella_longbeachae_NSW150 0
Legionella_pneumophila_str._Corby 0
gamma_proteobacterium_HdN1 0
Photorhabdus_asymbiotica 0
Xenorhabdus_bovienii_SS-2004 0
Xenorhabdus_nematophila_ATCC_19061 0
Edwardsiella_ictaluri_93-146 0
Yersinia_pseudotuberculosis_IP_31758 0
Yersinia_pestis_Pestoides_F 0
Serratia_sp._ATCC_39006 0
Serratia_proteamaculans_568 0
Pectobacterium_wasabiae_WPP163 0
Pectobacterium_sp._SCC3193 1
Sodalis_glossinidius_str._'morsitans' 1
Pantoea_sp._At-9b 0
Pantoea_vagans_C9-1 0
Pantoea_ananatis_LMG_20103 1
Erwinia_amylovora_ATCC_49946 0
Cronobacter_sakazakii_ES15 0
Candidatus_Hamiltonella_defensa_5AT_(Acyrthosiphon_pisum) 0
Shigella_sonnei_Ss046 2
Shigella_flexneri_5_str._8401 2
Shigella_dysenteriae_Sd197 1
Salmonella_bongori_NCTC_12419 0
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 2
Enterobacter_aerogenes_KCTC_2190 0
Escherichia_fergusonii_ATCC_35469 2
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 0
Enterobacter_sp._R4-368 0
Citrobacter_rodentium_ICC168 0
Azotobacter_vinelandii_DJ 0
Pseudomonas_sp._TKP 1
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 1
Pseudomonas_syringae_pv._tomato_str._DC3000 0
Pseudomonas_putida_F1 1
Pseudomonas_protegens_Pf-5 1
Pseudomonas_fluorescens_SBW25 1
Pseudomonas_mendocina_ymp 1
Pseudomonas_aeruginosa_UCBPP-PA14 1
Psychrobacter_arcticus_273-4 0
Methylophaga_sp._JAM1 1
Francisella_noatunensis_subsp._orientalis_str._Toba_04 1
Methanocella_arvoryzae_MRE50 1
Methanosaeta_harundinacea_6Ac 0
Methanosaeta_thermophila_PT 0
Methanosaeta_concilii_GP6 0
Methanosalsum_zhilinae_DSM_4017 1
Methanosarcina_acetivorans_C2A 0
Methanosarcina_mazei_Go1 1
Methanosarcina_barkeri_str._Fusaro 1
Methanosphaerula_palustris_E1-9c 1
Thermoplasmatales_archaeon_BRNA1 0
Haloarcula_hispanica_ATCC_33960 0
Haloarcula_marismortui_ATCC_43049 0
Halobacterium_salinarum_R1 0
Halobacterium_sp._NRC-1 0
Methanocaldococcus_sp._FS406-22 0

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   1
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   1
Paracoccidioides_brasiliensis_Pb03_ 0
Ajellomyces_dermatitidis_ER-3_ 0
Histoplasma_capsulatum_H143 0
Histoplasma_capsulatum_H88 0
Histoplasma_capsulatum_G186AR 0
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   1
Hordeum_vulgare_22   (Domesticated barley)   3
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   1
Trypanosoma_brucei_Lister_427_v4.1 3
Neospora_caninum_Nc-Liverpool_6.2 0
Plasmodium_falciparum_HB3_ 0
Plasmodium_falciparum_Dd2_ 0
Chroococcidiopsis_thermalis_PCC_7203 4
Chamaesiphon_minutus_PCC_6605 3
Synechocystis_sp._PCC_6803_substr._PCC-P 1
Synechocystis_sp._PCC_6803_substr._PCC-N 1
Synechocystis_sp._PCC_6803_substr._GT-I 1
Synechocystis_sp._PCC_6803 1
Cyanobium_gracile_PCC_6307 1
Dactylococcopsis_salina_PCC_8305 1
Synechococcus_sp._JA-2-3B'a(2-13) 1
Synechococcus_sp._JA-3-3Ab 1
Synechococcus_sp._PCC_7002 1
Synechococcus_elongatus_PCC_6301 2
Prochlorococcus_marinus_str._MIT_9313 3
Prochlorococcus_marinus_str._MIT_9303 2
Crinalium_epipsammum_PCC_9333 4
Oscillatoria_nigro-viridis_PCC_7112 7
Oscillatoria_acuminata_PCC_6304 6
Arthrospira_platensis_NIES-39 8
Cyanothece_sp._PCC_7822 5
Cyanothece_sp._PCC_7425 7
Cyanothece_sp._PCC_7424 4
Cyanothece_sp._ATCC_51142 1
Cyanothece_sp._PCC_8801 3
Cyanobacterium_aponinum_PCC_10605 4
Cyanobacterium_stanieri_PCC_7202 3
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 3
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 3
Stanieria_cyanosphaera_PCC_7437 7
Calothrix_parietina_Calothrix_sp._PCC_6303 5
Cylindrospermum_stagnale_PCC_7417 5
Anabaena_cylindrica_PCC_7122 8
Mycoplasma_leachii_PG50 1
Mycoplasma_mycoides_subsp._mycoides_SC_str._Gladysdale 1
Mycoplasma_mycoides_subsp._mycoides_SC_str._PG1 1
Mycoplasma_bovis_Hubei-1 1
Gordonibacter_pamelaeae_7-10-1-b 1
Adlercreutzia_equolifaciens_DSM_19450 1
Frankia_sp._EuI1c 2
Frankia_sp._CcI3 0
Nocardiopsis_alba_ATCC_BAA-2165 1
Streptomyces_albus_J1074 1
Streptomyces_rapamycinicus_NRRL_5491 4
Streptomyces_davawensis_JCM_4913 3
Streptomyces_fulvissimus_DSM_40593 2
Streptomyces_venezuelae_ATCC_10712 2
Streptomyces_collinus_Tu_365 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 3
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 1
Saccharothrix_espanaensis_DSM_44229 5
Amycolatopsis_mediterranei_RB 3
Amycolatopsis_mediterranei_S699 3
Amycolatopsis_mediterranei_S699 3
Amycolatopsis_orientalis_HCCB10007 3
Actinoplanes_friuliensis_DSM_7358 1
Rhodococcus_pyridinivorans_SB3094 1
Rhodococcus_erythropolis_CCM2595 2
Nocardia_brasiliensis_ATCC_700358 0
Mycobacterium_tuberculosis_EAI5/NITR206 0
Mycobacterium_tuberculosis_CAS/NITR204 0
Mycobacterium_tuberculosis_CCDC5180 0
Mycobacterium_tuberculosis_H37Ra 0
Mycobacterium_tuberculosis_H37Rv 0
Corynebacterium_callunae_DSM_20147 0
Corynebacterium_glutamicum_SCgG2 0
Corynebacterium_glutamicum_SCgG1 0
Corynebacterium_glutamicum_ATCC_13032 1
Corynebacterium_glutamicum_ATCC_13032 1
Corynebacterium_glutamicum_ATCC_13032 1
Bifidobacterium_animalis_subsp._lactis_Bl12 1
Bifidobacterium_animalis_subsp._lactis_ATCC_27673 1
Bifidobacterium_animalis_subsp._lactis_BLC1 1
Bifidobacterium_animalis_subsp._lactis_CNCM_I-2494 1
Bifidobacterium_animalis_subsp._lactis_V9 1
Bifidobacterium_animalis_subsp._lactis_DSM_10140 1
Bifidobacterium_animalis_subsp._lactis_BB-12 1
Bifidobacterium_animalis_subsp._lactis_AD011 1
Actinomyces_graevenitzii_C83_ 0
Actinomyces_odontolyticus_ATCC_17982 0
Actinomyces_viscosus_C505 1
Eubacterium_siraeum_V10Sc8a 1
Desulfosporosinus_meridiei_DSM_13257 2
Desulfotomaculum_gibsoniae_DSM_7213 1
Clostridium_difficile_BI1 2
Clostridium_difficile_R20291 2
Clostridium_difficile_CD196 2
Clostridium_saccharobutylicum_DSM_13864 3
Clostridium_autoethanogenum_DSM_10061 2
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 4
Clostridium_tetani_genome_12124569 1
Clostridium_perfringens_str._13 1
Clostridium_pasteurianum_BC1 1
Clostridium_botulinum_H04402_065 1
Clostridium_botulinum_F_str._230613 2
Clostridium_botulinum_F_str._Langeland 2
Clostridium_botulinum_E3_str._Alaska_E43 1
Clostridium_botulinum_B1_str._Okra 2
Clostridium_botulinum_Ba4_str._657 2
Clostridium_botulinum_A2_str._Kyoto 2
Clostridium_botulinum_A3_str._Loch_Maree 2
Clostridium_botulinum_A_str._Hall 2
Clostridium_botulinum_A_str._ATCC_19397 2
Clostridium_acetobutylicum_DSM_1731 2
Clostridium_acetobutylicum_EA_2018 2
Lactobacillus_reuteri_I5007 0
Exiguobacterium_antarcticum_B7 1
Paenibacillus_sp._Y412MC10 3
Paenibacillus_mucilaginosus_KNP414 1
Paenibacillus_mucilaginosus_K02 4
Paenibacillus_polymyxa_CR1 4
Paenibacillus_polymyxa_SC2 5
Paenibacillus_polymyxa_E681 3
Listeria_monocytogenes_EGD_sequence 1
Listeria_monocytogenes_serotype_4b_str._LL195 1
Listeria_monocytogenes_07PF0776 1
Listeria_monocytogenes_M7 1
Listeria_monocytogenes_J1-220 1
Listeria_monocytogenes_J1816 1
Listeria_monocytogenes_SLCC2376 1
Listeria_monocytogenes_SLCC5850 1
Listeria_monocytogenes_ATCC_19117 1
Listeria_monocytogenes_L312 1
Listeria_monocytogenes_SLCC2479 1
Listeria_monocytogenes_SLCC7179 1
Listeria_monocytogenes_SLCC2540 1
Listeria_monocytogenes_SLCC2378 1
Listeria_monocytogenes_serotype_1/2b_str._SLCC2755 1
Listeria_monocytogenes_serotype_1/2c_str._SLCC2372 1
Listeria_monocytogenes_serotype_7_str._SLCC2482 1
Listeria_monocytogenes_08-5578 1
Listeria_monocytogenes_08-5923 1
Listeria_monocytogenes_L99 1
Listeria_monocytogenes_HCC23 1
Listeria_monocytogenes_10403S 1
Listeria_monocytogenes_J0161 1
Listeria_monocytogenes_Finland_1998 1
Listeria_monocytogenes_FSL_R2-561 1
Listeria_monocytogenes_serotype_4b_str._F2365 1
Listeria_monocytogenes_EGD-e 1
Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3 2
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 1
Bacillus_amyloliquefaciens_CC178 1
Bacillus_subtilis_PY79 2
Bacillus_subtilis_XF-1 2
Bacillus_subtilis_QB928 2
Bacillus_subtilis_BSn5 2
Bacillus_subtilis_subsp._subtilis_str._BAB-1 2
Bacillus_subtilis_subsp._subtilis_str._BSP1 2
Bacillus_subtilis_subsp._subtilis_str._RO-NN-1 2
Bacillus_subtilis_subsp._subtilis_6051-HGW 2
Bacillus_subtilis_subsp._spizizenii_TU-B-10 2
Bacillus_subtilis_subsp._spizizenii_str._W23 1
Bacillus_subtilis_subsp._natto_BEST195 2
Bacillus_infantis_NRRL_B-14911 1
Bacillus_toyonensis_BCT-7112 1
Bacillus_thuringiensis_HD-771 1
Bacillus_thuringiensis_HD-789 1
Bacillus_thuringiensis_MC28 2
Bacillus_thuringiensis_serovar_chinensis_CT-43 1
Bacillus_thuringiensis_YBT-1518 1
Bacillus_thuringiensis_Bt407 1
Bacillus_thuringiensis_serovar_konkukian_str._97-27 1
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 1
Bacillus_thuringiensis_BMB171 1
Bacillus_thuringiensis_serovar_finitimus_YBT-020 1
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 1
Bacillus_cereus_FRI-35 1
Bacillus_cereus_biovar_anthracis_str._CI 2
Bacillus_cereus_AH820 1
Bacillus_cereus_AH187 1
Bacillus_cereus_B4264 1
Bacillus_cereus_G9842 1
Bacillus_cereus_Q1 1
Bacillus_cereus_F837/76 1
Bacillus_cereus_NC7401 1
Bacillus_cereus_E33L 1
Bacillus_cereus_ATCC_14579 2
Bacillus_anthracis_str._H9401 1
Bacillus_anthracis_str._CDC_684 1
Bacillus_anthracis_str._'Ames_Ancestor' 1
Bacillus_anthracis_str._Sterne 1
Bacillus_anthracis_str._Ames 1
Bacillus_megaterium_WSH-002 1
Bacillus_megaterium_QM_B1551 2
Chlorobium_phaeobacteroides_BS1 0
Porphyromonas_gingivalis_TDC60 0
Porphyromonas_gingivalis_W83 0
Bacteroides_fragilis_638R 1
Bacteroides_fragilis_NCTC_9343 1
Desulfocapsa_sulfexigens_DSM_10523 1
Desulfobacula_toluolica_Tol2 0
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 0
Desulfovibrio_gigas_DSM_1382_=_ATCC_19364 0
Desulfovibrio_desulfuricans_ND132 0
Geobacter_sulfurreducens_PCA 2
Sorangium_cellulosum_So0157-2 1
Myxococcus_stipitatus_DSM_14675 0
Pandoraea_pnomenusa_3kgm 0
Burkholderia_sp._YI23 0
Burkholderia_sp._CCGE1001 0
Burkholderia_thailandensis_MSMB121 1
Burkholderia_pseudomallei_MSHR305 0
Burkholderia_pseudomallei_NCTC_13179 0
Burkholderia_pseudomallei_BPC006 1
Burkholderia_pseudomallei_1026b 0
Burkholderia_pseudomallei_668 1
Burkholderia_pseudomallei_1710b 0
Burkholderia_pseudomallei_K96243 0
Burkholderia_mallei_NCTC_10229 0
Burkholderia_mallei_NCTC_10247 0
Burkholderia_mallei_ATCC_23344 1
Burkholderia_cenocepacia_J2315 1
Variovorax_paradoxus_B4 0
Variovorax_paradoxus_EPS 1
Taylorella_asinigenitalis_14/45 0
Taylorella_equigenitalis_14/56 1
Taylorella_equigenitalis_ATCC_35865 0
Bordetella_parapertussis_Bpp5 0
Bordetella_bronchiseptica_MO149 0
Bordetella_bronchiseptica_253 0
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 1
Sulfuricella_denitrificans_skB26 1
Caulobacter_crescentus_CB15 0
Phaeobacter_gallaeciensis_DSM_17395 1
Phaeobacter_gallaeciensis_DSM_26640 0
Octadecabacter_antarcticus_307 1
Octadecabacter_arcticus_238 1
Magnetospirillum_gryphiswaldense_MSR-1_v2 0
Rhodospirillum_rubrum_ATCC_11170 1
Micavibrio_aeruginosavorus_EPB 0
Wolbachia_endosymbiont_of_Drosophila_melanogaster 0
Wolbachia_endosymbiont_of_Onchocerca_ochengi_str._Adamawa_Cameroon 0
Wolbachia_endosymbiont_strain_TRS_of_Brugia_malayi 0
Wolbachia_endosymbiont_of_Drosophila_simulans_wHa 0
Wolbachia_endosymbiont_of_Drosophila_simulans_wNo 0
Ehrlichia_muris_AS145 0
Ehrlichia_ruminantium_str._Welgevonden 0
Ehrlichia_ruminantium_str._Welgevonden 0
Anaplasma_phagocytophilum_str._Dog2 0
Anaplasma_phagocytophilum_str._HZ2 0
Anaplasma_phagocytophilum_str._JM 0
Anaplasma_marginale_str._Dawn 0
Anaplasma_marginale_str._Gypsy_Plains 0
Orientia_tsutsugamushi_str._Ikeda 0
Rickettsia_bellii_RML369-C 0
Rickettsia_canadensis_str._CA410 0
Rickettsia_typhi_str._B9991CWPP 0
Rickettsia_typhi_str._TH1527 0
Rickettsia_prowazekii_str._Breinl 0
Rickettsia_prowazekii_str._NMRC_Madrid_E 0
Rickettsia_prowazekii_str._RpGvF24 0
Rickettsia_prowazekii_str._GvV257 0
Rickettsia_prowazekii_str._Dachau 0
Rickettsia_prowazekii_str._Katsinyian 0
Rickettsia_prowazekii_str._Chernikova 0
Rickettsia_prowazekii_Rp22 0
Rickettsia_prowazekii_str._Madrid_E 0
Rickettsia_slovaca_str._D-CWPP 0
Rickettsia_massiliae_str._AZT80 0
Rickettsia_rickettsii_str._Arizona 0
Rickettsia_rickettsii_str._Brazil 0
Rickettsia_rickettsii_str._Hauke 0
Rickettsia_rickettsii_str._Colombia 0
Rickettsia_rickettsii__str._Hlp#2 0
Rickettsia_rickettsii_str._Hino 0
Rickettsia_rickettsii_str._Iowa 0
Methylobacterium_extorquens_DM4 0
Methylobacterium_extorquens_PA1 0
Sinorhizobium_fredii_USDA_257 1
Sinorhizobium_fredii_HH103 1
Rhizobium_leguminosarum_bv._trifolii_WSM2304 1
Hyphomicrobium_nitrativorans_NL23 2
Hyphomicrobium_denitrificans_1NES1 3
Rhodopseudomonas_palustris_DX-1 0
Bradyrhizobium_sp._S23321 0
Bradyrhizobium_oligotrophicum_S58 1
Bradyrhizobium_japonicum_USDA_6 0
Pasteurella_multocida_36950 0
Pasteurella_multocida_subsp._multocida_str._HN06 0
Pasteurella_multocida_subsp._multocida_str._Pm70 0
Haemophilus_influenzae_R2846 0
Shewanella_baltica_BA175 1
Shewanella_baltica_OS678 1
Shewanella_baltica_OS117 1
Shewanella_baltica_OS223 1
Shewanella_baltica_OS195 1
Shewanella_baltica_OS155 1
Alteromonas_macleodii_str._'English_Channel_615' 1
Alteromonas_macleodii_str._'English_Channel_673' 2
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 1
Alteromonas_macleodii_ATCC_27126 1
Alcanivorax_dieselolei_B5 1
Thioalkalivibrio_nitratireducens_DSM_14787 0
Thioflavicoccus_mobilis_8321 0
Coxiella_burnetii_CbuK_Q154 0
Coxiella_burnetii_CbuG_Q212 0
Coxiella_burnetii_RSA_331 0
Coxiella_burnetii_RSA_493 0
Legionella_pneumophila_str._Paris 0
Legionella_pneumophila_str._Lens 0
Legionella_pneumophila_subsp._pneumophila_LPE509 0
Legionella_pneumophila_subsp._pneumophila_str._Thunder_Bay 0
Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 0
Legionella_pneumophila_subsp._pneumophila 0
Legionella_pneumophila_subsp._pneumophila 0
Legionella_pneumophila_subsp._pneumophila_ATCC_43290 0
Legionella_pneumophila_2300/99_Alcoy 0
Rahnella_aquatilis_HX2 0
Yersinia_pseudotuberculosis_PB1/+ 0
Yersinia_pseudotuberculosis_YPIII 0
Yersinia_pseudotuberculosis_IP_32953 0
Yersinia_pestis_biovar_Microtus_str._91001 0
Yersinia_pestis_Z176003 0
Yersinia_pestis_D182038 0
Yersinia_pestis_D106004 0
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 0
Yersinia_pestis_Nepal516 0
Yersinia_pestis_Antiqua 0
Yersinia_pestis_Angola 0
Yersinia_pestis_KIM10+ 0
Serratia_marcescens_FGI94 0
Serratia_marcescens_WW4 0
Pantoea_ananatis_LMG_5342 0
Pantoea_ananatis_PA13 0
Pantoea_ananatis_AJ13355 0
Cronobacter_sakazakii_CMCC_45402 0
Shigella_sonnei_53G 2
Shigella_flexneri_2002017 0
Shigella_flexneri_2a_str._2457T 0
Shigella_flexneri_2a_str._301 0
Shigella_boydii_Sb227 1
Salmonella_bongori_N268-08 0
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 2
Salmonella_enterica_subsp._enterica_serovar_4,[5],12:i:-_str._08-1736 1
Salmonella_enterica_subsp._enterica_serovar_Javiana_str._CFSAN001992 2
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 2
Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 1
Salmonella_enterica_subsp._enterica_serovar_Enteritidis_str._P125109 1
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 1
Salmonella_enterica_subsp._enterica_serovar_Newport_str._USMARC-S3124.1 1
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 1
Salmonella_enterica_subsp._enterica_serovar_Dublin_str._CT_02021853 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_var._5-_str._CFSAN001921 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._798 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 1
Salmonella_enterica_The_genome_of__subsp._enterica_serovar_Typhimurium_str._DT2 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_Definitive_Type_104 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._P-stx-12 2
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty21a 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2 1
Salmonella_enterica_serovar_Bovismorbificans_genomics 2
Salmonella_enterica_subsp._enterica_serovar_Bareilly_str._CFSAN000189 1
Salmonella_enterica_subsp._enterica_serovar_Agona_str._24249 2
Salmonella_enterica_subsp._enterica_serovar_Agona_str._SL483 2
Salmonella_enterica_subsp._enterica_serovar_Weltevreden_str._2007-60-3289-1 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_B_str._SPB7 2
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._AKU_12601 2
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._ATCC_9150 2
Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._B182 2
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 2
Salmonella_enterica_subsp._enterica_serovar_Pullorum_str._S06004 2
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._CDC1983-67 2
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._RKS5078 2
Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum_str._287/91 1
Enterobacter_aerogenes_EA1509E 0
Escherichia_coli_E24377A 2
Escherichia_coli_LY180 0
Escherichia_coli_APEC_O78 1
Escherichia_coli_O7:K1_str._CE10 2
Escherichia_coli_O104:H4_str._2009EL-2050 1
Escherichia_coli_O104:H4_str._2009EL-2071 1
Escherichia_coli_O104:H4_str._2011C-3493 1
Escherichia_coli_P12b 0
Escherichia_coli_042 2
Escherichia_coli_Xuzhou21 2
Escherichia_coli_UMNK88 0
Escherichia_coli_KO11FL 0
Escherichia_coli_KO11FL 0
Escherichia_coli_IAI39 2
Escherichia_coli_UMN026 4
Escherichia_coli_55989 0
Escherichia_coli_S88 0
Escherichia_coli_IAI1 1
Escherichia_coli_W 1
Escherichia_coli_W 1
Escherichia_coli_DH1 1
Escherichia_coli_DH1 1
Escherichia_coli_ATCC_8739 0
Escherichia_coli_BL21(DE3) 0
Escherichia_coli_BL21(DE3) 0
Escherichia_coli_SMS-3-5 1
Escherichia_coli_SE11 2
Escherichia_coli_O103:H2_str._12009 1
Escherichia_coli_HS 0
Escherichia_coli_ETEC_H10407 1
Escherichia_coli_O55:H7_str._RM12579 1
Escherichia_coli_O55:H7_str._CB9615 1
Escherichia_coli_O26:H11_str._11368 1
Escherichia_coli_O111:H-_str._11128 1
Escherichia_coli_O157:H7_str._TW14359 1
Escherichia_coli_O157:H7_str._EC4115 1
Escherichia_coli_O157:H7_str._Sakai 2
Escherichia_coli_O157:H7_str._EDL933 2
Escherichia_coli_str._K-12_substr._MDS42 0
Escherichia_coli_BW2952 0
Escherichia_coli_str._K-12_substr._MG1655 0
Escherichia_coli_str._K-12_substr._W3110 1
Escherichia_coli_str._K-12_substr._DH10B 1
Escherichia_coli_B_str._REL606 1
Azotobacter_vinelandii_CA6 0
Azotobacter_vinelandii_CA 0
Pseudomonas_stutzeri_DSM_10701 1
Pseudomonas_monteilii_SB3101 1
Pseudomonas_monteilii_SB3078 1
Pseudomonas_putida_H8234 1
Pseudomonas_putida_HB3267 1
Pseudomonas_putida_NBRC_14164 1
Pseudomonas_putida_DOT-T1E 1
Pseudomonas_putida_S16 1
Pseudomonas_putida_BIRD-1 1
Pseudomonas_putida_ND6 1
Pseudomonas_putida_KT2440 1
Pseudomonas_putida_GB-1 1
Pseudomonas_protegens_CHA0 2
Pseudomonas_fluorescens_F113 1
Pseudomonas_resinovorans_NBRC_106553 1
Pseudomonas_mendocina_NK-01 1
Pseudomonas_aeruginosa_SCV20265 1
Pseudomonas_aeruginosa_MTB-1 1
Pseudomonas_aeruginosa_LES431 1
Pseudomonas_aeruginosa_RP73 1
Pseudomonas_aeruginosa_B136-33 1
Pseudomonas_aeruginosa_PA1 1
Pseudomonas_aeruginosa_DK2 1
Pseudomonas_aeruginosa_NCGM2.S1 1
Pseudomonas_aeruginosa_M18 1
Pseudomonas_aeruginosa_LESB58 1
Pseudomonas_aeruginosa_PA7 1
Pseudomonas_aeruginosa_PAO1 1
Methylophaga_sp._JAM7 1
Francisella_noatunensis_subsp._orientalis_LADL--07-285A 1
Sulfolobus_acidocaldarius_SUSAZ 0
Methanolobus_psychrophilus_R15 0
Methanoregula_formicica_Methanoregula_formicicum_SMSP 0
Archaeoglobus_sulfaticallidus_PM70-1 0
Thermococcus_litoralis_DSM_5473 0
Halovivax_ruber_XH-70 0
Natronococcus_occultus_SP4 0
Haloquadratum_walsbyi_C23 0
Halorhabdus_tiamatea_SARL4B 0

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   0
Pan_troglodytes_69_2.1.4   (Chimpanzee)   0
Gorilla_gorilla_69_3.1   (Western gorilla)   0
Pongo_abelii_69_2   (Sumatran orangutan)   0
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   0
Macaca_mulatta_69_1   (Rhesus monkey)   0
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   0
Otolemur_garnettii_69_3   (Small-eared galago)   0
Microcebus_murinus_69_1   (Gray mouse lemur)   0
Rattus_norvegicus_69_3.4   (Norway rat)   0
Mus_musculus_69_38   (House mouse)   0
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   0
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   0
Cavia_porcellus_69_3   (Domestic guinea pig)   0
Oryctolagus_cuniculus_69_2   (Rabbit)   0
Ochotona_princeps_69   (American pika)   0
Tupaia_belangeri_69   (Northern tree shrew)   0
Sus_scrofa_69_10.2   (Pig)   0
Bos_taurus_69_3.1   (Cattle)   0
Vicugna_pacos_69_1   (Alpaca)   0
Tursiops_truncatus_69_1   (Bottlenose dolphin)   0
Mustela_putorius_furo_69_1.0   (Domestic ferret)   0
Ailuropoda_melanoleuca_69_1   (Giant panda)   0
Canis_familiaris_69_3.1   (Dog)   0
Felis_catus_69   (Domestic cat)   0
Equus_caballus_69_2   (Horse)   0
Myotis_lucifugus_69_2.0   (Little brown bat)   0
Pteropus_vampyrus_69_1   (Large flying fox)   0
Sorex_araneus_69_1   (European shrew)   0
Erinaceus_europaeus_69   (Western European hedgehog)   0
Procavia_capensis_69_1   (Cape rock hyrax)   1
Echinops_telfairi_69   (Small Madagascar hedgehog)   0
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   1
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_69_1.0   (Tammar wallaby)   0
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   0
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   1
Ornithorhynchus_anatinus_69_5   (Platypus)   0
Meleagris_gallopavo_69_2   (Turkey)   0
Gallus_gallus_69_2   (Chicken)   2
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   0
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   0
Oryzias_latipes_69_1   (Japanese medaka)   1
Danio_rerio_69_9   (Zebrafish)   0
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   1
Drosophila_melanogaster_69_5   (Fruit fly)   1
Arabidopsis_thaliana_10   (Thale cress)   3

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   0
Homo_sapiens__(NCBI_version)   (Human)   0
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   0
Picea_sitchensis__(Incomplete)   (Sitka spruce)   2
Lotus_japonicus__(Early_assembly) 1
Malus_x_domestica_(Duplicate)   (Apple)   7
Ricinus_communis__(Early_assembly)   (Castor bean)   2
Nicotiana_benthamiana_0.4.4_(Early_draft) 5
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   2
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   2
Phoenix_dactylifera__(Early_draft)   (Date palm)   0
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 0
Wolbachia_endosymbiont_of_Brugia_malayi_v1.0_(Broad_Institute) 0
NCBI_plasmid_sequences_(Plasmids) 33
Uniprot_2018_03_genome 24987
NCBI_2017_08_genome 32281
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 1
NCBI_viral_sequences_(Viral) 2
Protein_Data_Bank_(all_PDB_sequenc) 20
TargetDB__(Targets) 11
Protozoadb_2010_08_(Protozoadb) 16
UniProt__viral_sequences_(Viral) 0
STRING_v9.0.5_(STRING) 372

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]