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Domain combinations for _gap_,141571,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

141571 - Pentapeptide repeat-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   4
Pan_troglodytes_76_2.1.4   (Chimpanzee)   0
Gorilla_gorilla_76_3.1   (Western gorilla)   1
Pongo_abelii_76_2   (Sumatran orangutan)   0
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   2
Papio_anubis_76   (Olive baboon)   0
Macaca_mulatta_76_1   (Rhesus monkey)   2
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   0
Otolemur_garnettii_76_3   (Small-eared galago)   0
Microcebus_murinus_76_1   (Gray mouse lemur)   0
Rattus_norvegicus_76_5.0   (Norway rat)   1
Mus_musculus_76_38   (House mouse)   2
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   1
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   1
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   1
Cavia_porcellus_76_3   (Domestic guinea pig)   0
Oryctolagus_cuniculus_76_2   (Rabbit)   0
Ochotona_princeps_76   (American pika)   0
Tupaia_belangeri_76   (Northern tree shrew)   0
Sus_scrofa_76_10.2   (Pig)   0
Bos_taurus_76_3.1   (Cattle)   0
Ovis_aries_76_3.1   (Sheep)   0
Vicugna_pacos_76_1   (Alpaca)   0
Tursiops_truncatus_76_1   (Bottlenose dolphin)   0
Mustela_putorius_furo_76_1.0   (Domestic ferret)   0
Ailuropoda_melanoleuca_76_1   (Giant panda)   1
Canis_familiaris_76_3.1   (Dog)   0
Felis_catus_76_6.2   (Domestic cat)   1
Equus_caballus_76_2   (Horse)   0
Myotis_lucifugus_76_2.0   (Little brown bat)   0
Pteropus_vampyrus_76_1   (Large flying fox)   0
Sorex_araneus_76_1   (European shrew)   1
Erinaceus_europaeus_76   (Western European hedgehog)   0
Echinops_telfairi_76   (Small Madagascar hedgehog)   1
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   2
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_76_1.0   (Tammar wallaby)   0
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   0
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   2
Ornithorhynchus_anatinus_76_5   (Platypus)   1
Saccoglossus_kowalevskii_v3.0 4
Meleagris_gallopavo_76_2   (Turkey)   0
Gallus_gallus_76_4   (Chicken)   0
Anas_platyrhynchos_76_1.0   (Mallard)   0
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   0
Ficedula_albicollis_76_1.0   (Collared flycatcher)   1
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   1
Astyanax_mexicanus_76   (Mexican tetra)   1
Danio_rerio_76_9   (Zebrafish)   2
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   1
Adineta_vaga 4
Octopus_bimaculoides_280 1
Helobdella_robusta_ 1
Capitella_sp._I_ 0
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   1
Rhodnius_prolixus_22 1
Daphnia_pulex_   (Common water flea)   1
Strigamia_maritima_22 0
Sarcoptes_scabiei 1
Caenorhabditis_japonica_ 1
Caenorhabditis_briggsae_2 1
Nematostella_vectensis_1.0   (Starlet sea anemone)   0
Hydra_vulgaris 2
Amphimedon_queenslandica 0
Proterospongia_sp._ATCC_50818_ 0
Monosiga_brevicollis_ 0
Sphaeroforma_arctica_JP610_ 0
Capsaspora_owczarzaki_ATCC_30864_ 0
Rhizopus_oryzae_RA_99-880_ 1
Rhodotorula_graminis_WP1_v1.0 1
Piloderma_croceum_F_1598_v1.0 1
Apiospora_montagnei_NRRL_25634_v1.0 0
Dothistroma_septosporum 1
Septoria_musiva_v1.0 1
Ajellomyces_dermatitidis_SLH14081_ 1
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 1
Aspergillus_zonatus_v1.0 1
Aspergillus_nidulans_FGSC_A4_ 1
Aspergillus_sydowii_v1.0 1
Aspergillus_versicolor_v1.0 1
Aspergillus_oryzae_RIB40_ 1
Aspergillus_flavus_NRRL3357_ 1
Dekkera_bruxellensis_CBS_2499_v2.0 0
Lodderomyces_elongisporus_NRRL_YB-4239_ 1
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 0
Catenaria_anguillulae_PL171_v1.0 1
Entamoeba_invadens_1.2 4
Eucalyptus_grandis_v201   (Rose gum)   2
Theobroma_cacao_B97-61/B2_v1   (Cacao)   1
Gossypium_raimondii_v221 2
Citrus_clementina_v165 1
Citrus_sinensis_v154   (Sweet orange)   3
Carica_papaya_   (Papaya)   1
Medicago_truncatula_   (Barrel medic)   1
Phaseolus_vulgaris_v186   (French bean)   1
Glycine_max_v109   (Soybean)   2
Fragaria_vesca_   (Wild strawberry)   1
Malus_domestica_v196   (Apple)   2
Linum_usitatissimum_v200   (Flax)   2
Manihot_esculenta_v147   (Cassava)   1
Populus_trichocarpa_v156   (Black cottonwood)   1
Vitis_vinifera_   (Wine grape)   1
Mimulus_guttatus_v140   (Spotted monkey flower)   1
Solanum_lycopersicum_v.2.3   (Tomato)   1
Solanum_tuberosum_   (Potato)   1
Aquilegia_coerulea_v195 2
Triticum_aestivum_22   (Bread wheat)   1
Aegilops_tauschii_22 1
Brachypodium_distachyon_   (Stiff brome)   1
Oryza_barthii_22   (African wild rice)   2
Oryza_meridionalis_22 1
Oryza_glumaepatula_22 3
Oryza_glaberrima   (African rice)   1
Oryza_punctata_22 1
Oryza_nivara_22 2
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   1
Oryza_sativa_v193   (Rice)   1
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   1
Panicum_virgatum_v202   (Switchgrass)   1
Setaria_italica_v164   (Foxtail millet)   1
Zea_mays_subsp._mays_   (Maize)   1
Zea_mays_v181   (Maize)   1
Sorghum_bicolor_   (Sorghum)   1
Volvox_carteri_f._nagariensis_ 1
Volvox_carteri_v199 4
Micromonas_sp._RCC299_ 0
Micromonas_pusilla_CCMP1545_v3.0 5
Porphyridium_purpureum_02_2012 1
Thecamonas_trahens_ATCC_50062_ 0
Cyanophora_paradoxa_ 1
Phytophthora_ramorum_1.1   (Sudden oak death agent)   0
Paramecium_tetraurelia_ 2
Neospora_caninum 0
Toxoplasma_gondii_VEG 0
Toxoplasma_gondii_ME49 0
Theileria_annulata 0
Plasmodium_falciparum_3D7_ 10
Plasmodium_vivax_SaI-1_7.0 3
Plasmodium_knowlesi_strain_H_ 5
Plasmodium_yoelii_ssp._yoelii_1_ 4
Plasmodium_chabaudi_ 1
Plasmodium_berghei_ANKA_ 2
Symbiodinium_minutum_clade_B1_v1.2 6
Naegleria_gruberi_ 0
Emiliania_huxleyi_CCMP1516_ 5
Leptolyngbya_sp._PCC_7376 1
Pseudanabaena_sp._PCC_7367 4
Acaryochloris_marina_MBIC11017 6
Synechocystis_sp._PCC_6803 1
Thermosynechococcus_sp._NK55 1
Thermosynechococcus_elongatus_BP-1 1
Microcoleus_sp._PCC_7113 7
Trichodesmium_erythraeum_IMS101 3
Geitlerinema_sp._PCC_7407 1
Cyanothece_sp._PCC_8802 2
Gloeocapsa_sp._PCC_7428 2
cyanobacterium_UCYN-A 1
Microcystis_aeruginosa_NIES-843 2
Rivularia_sp._PCC_7116 5
Calothrix_sp._PCC_7507 1
Anabaena_variabilis_ATCC_29413 0
Nostoc_sp._PCC_7107 1
Nostoc_punctiforme_PCC_73102 2
Nostoc_sp._PCC_7120 2
Anabaena_sp._90 2
Mycoplasma_leachii_99/014/6 1
Mycoplasma_mycoides_subsp._capri_LC_str._95010 1
Eggerthella_sp._YY7918 0
Geodermatophilus_obscurus_DSM_43160 1
Catenulispora_acidiphila_DSM_44928 1
Stackebrandtia_nassauensis_DSM_44728 2
Frankia_sp._EAN1pec 3
Frankia_alni_ACN14a 1
Streptosporangium_roseum_DSM_43021 1
Streptomyces_avermitilis_MA-4680 1
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 1
Nocardioides_sp._JS614 0
Micromonospora_sp._L5 1
Micromonospora_aurantiaca_ATCC_27029 1
Actinoplanes_sp._N902-109 0
Actinoplanes_missouriensis_431 1
Gordonia_polyisoprenivorans_VH2 0
Mycobacterium_vanbaalenii_PYR-1 0
Sanguibacter_keddieii_DSM_10542 1
Rothia_mucilaginosa_DY-18 1
Rothia_dentocariosa_ATCC_17931 1
Sphaerobacter_thermophilus_DSM_20745 0
Clostridium_clariflavum_DSM_19732 1
Desulfotomaculum_acetoxidans_DSM_771 0
Clostridium_sp._BNL1100 1
Clostridium_cellulovorans_743B 1
Clostridium_acetobutylicum_ATCC_824 0
Paenibacillus_sp._JDR-2 2
Paenibacillus_mucilaginosus_3016 1
Pelodictyon_phaeoclathratiforme_BU-1 1
Chlorobium_chlorochromatii_CaD3 1
Chlorobium_phaeobacteroides_DSM_266 1
Chlorobium_phaeovibrioides_DSM_265 0
Chlorobium_limicola_DSM_245 0
Chloroherpeton_thalassium_ATCC_35110 1
Treponema_succinifaciens_DSM_2489 1
Syntrophus_aciditrophicus_SB 1
Desulfobulbus_propionicus_DSM_2032 1
Desulfatibacillum_alkenivorans_AK-01 1
Desulfobacterium_autotrophicum_HRM2 1
Desulfovibrio_piezophilus 1
Desulfovibrio_aespoeensis_Aspo-2 1
Desulfovibrio_salexigens_DSM_2638 1
Geobacter_sp._M21 0
Geobacter_sulfurreducens_KN400 1
Sorangium_cellulosum_'So_ce_56' 1
Anaeromyxobacter_dehalogenans_2CP-1 0
Myxococcus_xanthus_DK_1622 2
Burkholderia_thailandensis_E264 1
Polaromonas_naphthalenivorans_CJ2 1
Methylotenera_versatilis_301 1
Magnetococcus_marinus_MC-1 0
Parvularcula_bermudensis_HTCC2503 3
Brevundimonas_subvibrioides_ATCC_15264 1
Erythrobacter_litoralis_HTCC2594 1
Maricaulis_maris_MCS10 1
Phaeobacter_gallaeciensis_2.10 1
Pseudovibrio_sp._FO-BEG1 1
Jannaschia_sp._CCS1 1
Roseobacter_litoralis_Och_149 1
Roseobacter_denitrificans_OCh_114 1
Azospirillum_brasilense_Sp245 0
Granulibacter_bethesdensis_CGDNIH1 1
Ehrlichia_ruminantium_str._Gardel 0
Anaplasma_phagocytophilum_HZ 0
Rickettsia_canadensis_str._McKiel 1
Rickettsia_typhi_str._Wilmington 1
Rickettsia_prowazekii_str._BuV67-CWPP 1
Rickettsia_heilongjiangensis_054 1
Rickettsia_peacockii_str._Rustic 1
Rickettsia_felis_URRWXCal2 1
Rickettsia_slovaca_13-B 1
Rickettsia_parkeri_str._Portsmouth 1
Rickettsia_massiliae_MTU5 1
Rickettsia_japonica_YH 1
Rickettsia_africae_ESF-5 1
Rickettsia_rhipicephali_str._3-7-female6-CWPP 1
Rickettsia_montanensis_str._OSU_85-930 1
Candidatus_Rickettsia_amblyommii_str._GAT-30V 1
Rickettsia_australis_str._Cutlack 1
Rickettsia_akari_str._Hartford 1
Rickettsia_rickettsii_str._'Sheila_Smith' 0
Rickettsia_conorii_str._Malish_7 1
Methylobacterium_extorquens_AM1 2
Methylobacterium_populi_BJ001 1
Methylobacterium_nodulans_ORS_2060 1
Methylobacterium_radiotolerans_JCM_2831 1
Agrobacterium_radiobacter_K84 1
Hyphomicrobium_sp._MC1 1
Saccharophagus_degradans_2-40 1
Aeromonas_salmonicida_subsp._salmonicida_A449 1
Vibrio_parahaemolyticus_RIMD_2210633 1
Vibrio_splendidus_LGP32 0
Shewanella_piezotolerans_WP3 1
Shewanella_halifaxensis_HAW-EB4 1
Shewanella_pealeana_ATCC_700345 1
Shewanella_woodyi_ATCC_51908 0
Shewanella_violacea_DSS12 1
Colwellia_psychrerythraea_34H 1
Alteromonas_sp._SN2 1
Marinomonas_mediterranea_MMB-1 1
Legionella_pneumophila_str._Corby 0
Sodalis_glossinidius_str._'morsitans' 1
Pantoea_sp._At-9b 1
Pantoea_vagans_C9-1 1
Erwinia_amylovora_ATCC_49946 1
Candidatus_Hamiltonella_defensa_5AT_(Acyrthosiphon_pisum) 1
Shigella_sonnei_Ss046 1
Shigella_flexneri_5_str._8401 1
Salmonella_bongori_NCTC_12419 1
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 2
Citrobacter_rodentium_ICC168 1
Pseudomonas_syringae_pv._tomato_str._DC3000 1
Methanosaeta_harundinacea_6Ac 1
Methanosarcina_barkeri_str._Fusaro 1
Haloarcula_hispanica_ATCC_33960 1
Halobacterium_salinarum_R1 0
Halobacterium_sp._NRC-1 0
Methanocaldococcus_sp._FS406-22 1

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   1
Paracoccidioides_brasiliensis_Pb03_ 1
Ajellomyces_dermatitidis_ER-3_ 1
Histoplasma_capsulatum_H143 1
Histoplasma_capsulatum_H88 1
Histoplasma_capsulatum_G186AR 1
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   1
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   1
Neospora_caninum_Nc-Liverpool_6.2 0
Plasmodium_falciparum_HB3_ 10
Plasmodium_falciparum_Dd2_ 8
Chroococcidiopsis_thermalis_PCC_7203 1
Chamaesiphon_minutus_PCC_6605 2
Synechocystis_sp._PCC_6803_substr._PCC-P 1
Synechocystis_sp._PCC_6803_substr._PCC-N 1
Synechocystis_sp._PCC_6803_substr._GT-I 1
Synechocystis_sp._PCC_6803 1
Cyanobium_gracile_PCC_6307 1
Synechococcus_sp._JA-2-3B'a(2-13) 1
Synechococcus_sp._JA-3-3Ab 1
Synechococcus_sp._PCC_7002 1
Crinalium_epipsammum_PCC_9333 1
Oscillatoria_nigro-viridis_PCC_7112 1
Oscillatoria_acuminata_PCC_6304 2
Cyanothece_sp._PCC_7822 1
Cyanothece_sp._PCC_7425 1
Cyanothece_sp._PCC_7424 1
Cyanothece_sp._ATCC_51142 4
Cyanothece_sp._PCC_8801 2
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 2
Stanieria_cyanosphaera_PCC_7437 1
Calothrix_parietina_Calothrix_sp._PCC_6303 8
Cylindrospermum_stagnale_PCC_7417 0
Anabaena_cylindrica_PCC_7122 1
Mycoplasma_leachii_PG50 2
Frankia_sp._CcI3 1
Streptomyces_collinus_Tu_365 1
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 1
Saccharothrix_espanaensis_DSM_44229 1
Amycolatopsis_orientalis_HCCB10007 1
Actinoplanes_friuliensis_DSM_7358 2
Mycobacterium_tuberculosis_EAI5/NITR206 0
Mycobacterium_tuberculosis_CAS/NITR204 1
Mycobacterium_tuberculosis_CCDC5180 0
Mycobacterium_tuberculosis_H37Ra 0
Mycobacterium_tuberculosis_H37Rv 0
Actinomyces_odontolyticus_ATCC_17982 0
Clostridium_botulinum_E3_str._Alaska_E43 1
Clostridium_acetobutylicum_DSM_1731 0
Clostridium_acetobutylicum_EA_2018 0
Lactobacillus_reuteri_I5007 1
Paenibacillus_mucilaginosus_KNP414 0
Paenibacillus_mucilaginosus_K02 0
Chlorobium_phaeobacteroides_BS1 1
Desulfobacula_toluolica_Tol2 1
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 2
Desulfovibrio_gigas_DSM_1382_=_ATCC_19364 1
Desulfovibrio_desulfuricans_ND132 1
Myxococcus_stipitatus_DSM_14675 1
Burkholderia_sp._YI23 1
Phaeobacter_gallaeciensis_DSM_26640 2
Anaplasma_phagocytophilum_str._Dog2 0
Anaplasma_phagocytophilum_str._HZ2 0
Anaplasma_phagocytophilum_str._JM 0
Rickettsia_canadensis_str._CA410 1
Rickettsia_typhi_str._B9991CWPP 1
Rickettsia_typhi_str._TH1527 1
Rickettsia_prowazekii_str._Breinl 1
Rickettsia_prowazekii_str._NMRC_Madrid_E 1
Rickettsia_prowazekii_str._RpGvF24 1
Rickettsia_prowazekii_str._GvV257 1
Rickettsia_prowazekii_str._Katsinyian 1
Rickettsia_prowazekii_str._Chernikova 1
Rickettsia_prowazekii_Rp22 1
Rickettsia_prowazekii_str._Madrid_E 1
Rickettsia_slovaca_str._D-CWPP 1
Rickettsia_massiliae_str._AZT80 1
Rickettsia_rickettsii_str._Arizona 1
Rickettsia_rickettsii_str._Brazil 1
Rickettsia_rickettsii_str._Hauke 1
Rickettsia_rickettsii_str._Colombia 1
Rickettsia_rickettsii__str._Hlp#2 1
Rickettsia_rickettsii_str._Hino 1
Rickettsia_rickettsii_str._Iowa 1
Methylobacterium_extorquens_DM4 2
Methylobacterium_extorquens_PA1 1
Hyphomicrobium_nitrativorans_NL23 2
Rhodopseudomonas_palustris_DX-1 1
Bradyrhizobium_oligotrophicum_S58 2
Bradyrhizobium_japonicum_USDA_6 1
Pasteurella_multocida_36950 1
Pasteurella_multocida_subsp._multocida_str._HN06 1
Haemophilus_influenzae_R2846 1
Thioalkalivibrio_nitratireducens_DSM_14787 1
Legionella_pneumophila_str._Paris 0
Legionella_pneumophila_str._Lens 0
Legionella_pneumophila_subsp._pneumophila_LPE509 0
Legionella_pneumophila_subsp._pneumophila_str._Thunder_Bay 0
Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 0
Legionella_pneumophila_subsp._pneumophila 0
Legionella_pneumophila_subsp._pneumophila 0
Legionella_pneumophila_subsp._pneumophila_ATCC_43290 0
Legionella_pneumophila_2300/99_Alcoy 0
Shigella_sonnei_53G 1
Shigella_flexneri_2002017 2
Shigella_flexneri_2a_str._2457T 1
Shigella_flexneri_2a_str._301 2
Salmonella_bongori_N268-08 1
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 1
Salmonella_enterica_subsp._enterica_serovar_4,[5],12:i:-_str._08-1736 2
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 1
Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 2
Salmonella_enterica_subsp._enterica_serovar_Enteritidis_str._P125109 2
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 1
Salmonella_enterica_subsp._enterica_serovar_Newport_str._USMARC-S3124.1 2
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 2
Salmonella_enterica_subsp._enterica_serovar_Dublin_str._CT_02021853 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_var._5-_str._CFSAN001921 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._798 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 2
Salmonella_enterica_The_genome_of__subsp._enterica_serovar_Typhimurium_str._DT2 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_Definitive_Type_104 2
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty21a 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2 1
Salmonella_enterica_serovar_Bovismorbificans_genomics 1
Salmonella_enterica_subsp._enterica_serovar_Bareilly_str._CFSAN000189 2
Salmonella_enterica_subsp._enterica_serovar_Agona_str._24249 1
Salmonella_enterica_subsp._enterica_serovar_Agona_str._SL483 1
Salmonella_enterica_subsp._enterica_serovar_Weltevreden_str._2007-60-3289-1 2
Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 2
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._B182 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 2
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 1
Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 2
Escherichia_coli_E24377A 1
Escherichia_coli_LY180 1
Escherichia_coli_APEC_O78 1
Escherichia_coli_O7:K1_str._CE10 4
Escherichia_coli_O104:H4_str._2009EL-2050 2
Escherichia_coli_O104:H4_str._2009EL-2071 2
Escherichia_coli_O104:H4_str._2011C-3493 2
Escherichia_coli_P12b 2
Escherichia_coli_042 7
Escherichia_coli_Xuzhou21 7
Escherichia_coli_UMNK88 1
Escherichia_coli_KO11FL 1
Escherichia_coli_KO11FL 1
Escherichia_coli_IAI39 4
Escherichia_coli_UMN026 6
Escherichia_coli_55989 2
Escherichia_coli_IAI1 2
Escherichia_coli_W 1
Escherichia_coli_W 1
Escherichia_coli_DH1 1
Escherichia_coli_DH1 1
Escherichia_coli_ATCC_8739 1
Escherichia_coli_BL21(DE3) 1
Escherichia_coli_BL21(DE3) 1
Escherichia_coli_SMS-3-5 5
Escherichia_coli_SE11 1
Escherichia_coli_O103:H2_str._12009 2
Escherichia_coli_HS 1
Escherichia_coli_ETEC_H10407 4
Escherichia_coli_O55:H7_str._RM12579 5
Escherichia_coli_O55:H7_str._CB9615 5
Escherichia_coli_O26:H11_str._11368 2
Escherichia_coli_O111:H-_str._11128 2
Escherichia_coli_O157:H7_str._TW14359 7
Escherichia_coli_O157:H7_str._EC4115 6
Escherichia_coli_O157:H7_str._Sakai 7
Escherichia_coli_O157:H7_str._EDL933 7
Escherichia_coli_str._K-12_substr._MDS42 1
Escherichia_coli_BW2952 1
Escherichia_coli_str._K-12_substr._MG1655 1
Escherichia_coli_str._K-12_substr._W3110 1
Escherichia_coli_str._K-12_substr._DH10B 1
Escherichia_coli_B_str._REL606 2
Pseudomonas_aeruginosa_B136-33 0
Methylophaga_sp._JAM7 1
Sulfolobus_acidocaldarius_SUSAZ 0
Methanolobus_psychrophilus_R15 1
Archaeoglobus_sulfaticallidus_PM70-1 1
Thermococcus_litoralis_DSM_5473 0
Halorhabdus_tiamatea_SARL4B 0

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   1
Pan_troglodytes_69_2.1.4   (Chimpanzee)   0
Gorilla_gorilla_69_3.1   (Western gorilla)   1
Pongo_abelii_69_2   (Sumatran orangutan)   0
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   1
Macaca_mulatta_69_1   (Rhesus monkey)   2
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   0
Otolemur_garnettii_69_3   (Small-eared galago)   0
Microcebus_murinus_69_1   (Gray mouse lemur)   0
Rattus_norvegicus_69_3.4   (Norway rat)   0
Mus_musculus_69_38   (House mouse)   1
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   1
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   1
Cavia_porcellus_69_3   (Domestic guinea pig)   0
Oryctolagus_cuniculus_69_2   (Rabbit)   0
Ochotona_princeps_69   (American pika)   0
Tupaia_belangeri_69   (Northern tree shrew)   0
Sus_scrofa_69_10.2   (Pig)   0
Bos_taurus_69_3.1   (Cattle)   0
Vicugna_pacos_69_1   (Alpaca)   0
Tursiops_truncatus_69_1   (Bottlenose dolphin)   0
Mustela_putorius_furo_69_1.0   (Domestic ferret)   0
Ailuropoda_melanoleuca_69_1   (Giant panda)   1
Canis_familiaris_69_3.1   (Dog)   0
Felis_catus_69   (Domestic cat)   0
Equus_caballus_69_2   (Horse)   0
Myotis_lucifugus_69_2.0   (Little brown bat)   0
Pteropus_vampyrus_69_1   (Large flying fox)   0
Sorex_araneus_69_1   (European shrew)   1
Erinaceus_europaeus_69   (Western European hedgehog)   0
Echinops_telfairi_69   (Small Madagascar hedgehog)   1
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   0
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_69_1.0   (Tammar wallaby)   0
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   0
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   2
Ornithorhynchus_anatinus_69_5   (Platypus)   1
Meleagris_gallopavo_69_2   (Turkey)   0
Gallus_gallus_69_2   (Chicken)   0
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   0
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   1
Danio_rerio_69_9   (Zebrafish)   1

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   4
Homo_sapiens__(NCBI_version)   (Human)   1
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   1
Picea_sitchensis__(Incomplete)   (Sitka spruce)   1
Malus_x_domestica_(Duplicate)   (Apple)   2
Ricinus_communis__(Early_assembly)   (Castor bean)   1
Nicotiana_benthamiana_0.4.4_(Early_draft) 1
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   1
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   1
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 0
NCBI_plasmid_sequences_(Plasmids) 13
Protozoadb_2010_08_(Protozoadb) 38
STRING_v9.0.5_(STRING) 216
Uniprot_2018_03_genome 17865
NCBI_2017_08_genome 29114
UniProt__viral_sequences_(Viral) 1
NCBI_viral_sequences_(Viral) 1
Protein_Data_Bank_(all_PDB_sequenc) 2
TargetDB__(Targets) 10

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