Domain combinations for _gap_,143503,_gap_,90209 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

143503 - PUG domain-like
90209 - Ran binding protein zinc finger-like

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

Jump to [ Top of page · Domain combinations in individual genomes ]

• All genomes
• All eukaryote genomes (domain E)
• All bacterial genomes (domain B+A)
• All eubacterial genomes (domain B)
• All archaeal genomes (domain A)

Groups of genomes may be slower than individual genomes.

Jump to [ Top of page · Domain combinations in groups of genomes ]

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains

Genome		Number
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)	(Fruit fly)	2
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)	(African malaria mosquito)	1

Longest transcript per gene

Genome		Number
Macropus_eugenii_69_1.0	(Tammar wallaby)	0
Sarcophilus_harrisii_69_7.0	(Tasmanian devil)	0
Monodelphis_domestica_69_5	(Gray short-tailed opossum)	0
Danio_rerio_69_9	(Zebrafish)	0
Drosophila_melanogaster_69_5	(Fruit fly)	1

Others

Genome		Number
STRING_v9.0.5_(STRING)		8
Uniprot_2018_03_genome		432
NCBI_2017_08_genome		83

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]