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Domain combinations for _gap_,158472,_gap_,58104 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

158472 - HAMP domain-like
58104 - Methyl-accepting chemotaxis protein (MCP) signaling domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Tuber_melanosporum_Mel28_22 0
Tuber_melanosporum_Vittad_   (Perigord truffle)   0
Hansenula_polymorpha_v2.0 0
Phytophthora_capsici_ 0
Leptolyngbya_sp._PCC_7376 0
Pseudanabaena_sp._PCC_7367 2
Acaryochloris_marina_MBIC11017 0
Synechocystis_sp._PCC_6803 0
Thermosynechococcus_sp._NK55 0
Thermosynechococcus_elongatus_BP-1 0
Synechococcus_elongatus_PCC_7942 0
Microcoleus_sp._PCC_7113 1
Geitlerinema_sp._PCC_7407 0
Cyanothece_sp._PCC_8802 1
Halothece_sp._PCC_7418 2
Microcystis_aeruginosa_NIES-843 0
Calothrix_sp._PCC_7507 0
Anabaena_variabilis_ATCC_29413 1
'Nostoc_azollae'_0708 0
Nostoc_sp._PCC_7107 1
Nostoc_sp._PCC_7120 1
Nostoc_sp._PCC_7524 0
Conexibacter_woesei_DSM_14684 1
Roseiflexus_sp._RS-1 1
Roseiflexus_castenholzii_DSM_13941 1
Chloroflexus_sp._Y-400-fl 1
Chloroflexus_aurantiacus_J-10-fl 1
Deinococcus_radiodurans_R1 1
Clostridium_clariflavum_DSM_19732 1
Clostridium_thermocellum_ATCC_27405 0
Ethanoligenens_harbinense_YUAN-3 3
Desulfosporosinus_acidiphilus_SJ4 0
Acetobacterium_woodii_DSM_1030 14
Clostridium_beijerinckii_NCIMB_8052 2
Gemmatimonas_aurantiaca_T-27 1
Melioribacter_roseus_P3M 2
Chloroherpeton_thalassium_ATCC_35110 0
Salinibacter_ruber_M8 2
Rhodothermus_marinus_DSM_4252 3
Pirellula_staleyi_DSM_6068 1
Coraliomargarita_akajimensis_DSM_45221 1
Calditerrivibrio_nitroreducens_DSM_19672 1
Deferribacter_desulfuricans_SSM1 1
Flexistipes_sinusarabici_DSM_4947 1
Candidatus_Koribacter_versatilis_Ellin345 1
Thermodesulfovibrio_yellowstonii_DSM_11347 1
Desulfovibrio_salexigens_DSM_2638 1
Geobacter_daltonii_FRC-32 2
Geobacter_sp._M21 2
Geobacter_uraniireducens_Rf4 1
Geobacter_lovleyi_SZ 1
Geobacter_sulfurreducens_KN400 2
Geobacter_metallireducens_GS-15 1
Haliangium_ochraceum_DSM_14365 1
Dechloromonas_aromatica_RCB 0
Azoarcus_sp._KH32C 0
Azoarcus_sp._BH72 1
Dechlorosoma_suillum_PS 0
Leptothrix_cholodnii_SP-6 1
Nitrosomonas_eutropha_C91 1
Nitrosomonas_europaea_ATCC_19718 0
Gallionella_capsiferriformans_ES-2 0
Methylotenera_versatilis_301 1
Methylovorus_sp._MP688 2
Methylovorus_glucosetrophus_SIP3-4 2
Magnetococcus_marinus_MC-1 0
Caulobacter_sp._K31 5
Caulobacter_crescentus_NA1000 6
Caulobacter_segnis_ATCC_21756 7
Phenylobacterium_zucineum_HLK1 3
Novosphingobium_sp._PP1Y 1
Roseobacter_litoralis_Och_149 2
Roseobacter_denitrificans_OCh_114 2
Rhodobacter_capsulatus_SB_1003 6
Rhodospirillum_photometricum_DSM_122 2
Rhodospirillum_centenum_SW 1
Azospirillum_lipoferum_4B 2
Azospirillum_sp._B510 1
Azospirillum_brasilense_Sp245 1
Gluconacetobacter_diazotrophicus_PAl_5 4
Acidiphilium_multivorum_AIU301 3
Acidiphilium_cryptum_JF-5 3
Gluconobacter_oxydans_621H 1
Polymorphum_gilvum_SL003B-26A1 1
Starkeya_novella_DSM_506 1
Methylobacterium_extorquens_AM1 1
Methylobacterium_sp._4-46 1
Sinorhizobium_fredii_NGR234 12
Sinorhizobium_medicae_WSM419 3
Sinorhizobium_meliloti_AK83 3
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 8
Rhizobium_etli_CIAT_652 17
Rhizobium_leguminosarum_bv._viciae_3841 13
Agrobacterium_tumefaciens_str._C58 9
Agrobacterium_radiobacter_K84 13
Agrobacterium_sp._H13-3 9
Agrobacterium_vitis_S4 21
Methylocella_silvestris_BL2 1
Beijerinckia_indica_subsp._indica_ATCC_9039 1
Pelagibacterium_halotolerans_B2 3
Hyphomicrobium_denitrificans_ATCC_51888 2
Rhodopseudomonas_palustris_BisA53 3
Bradyrhizobium_japonicum_USDA_110 2
Bradyrhizobium_sp._ORS_278 2
Saccharophagus_degradans_2-40 1
Aeromonas_veronii_B565 1
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 1
Pseudoalteromonas_sp._SM9913 1
Hahella_chejuensis_KCTC_2396 1
Marinomonas_mediterranea_MMB-1 0
Pseudoxanthomonas_suwonensis_11-1 1
Stenotrophomonas_maltophilia_K279a 6
Xanthomonas_axonopodis_pv._citri_str._306 11
Xanthomonas_albilineans_GPE_PC73 9
Xanthomonas_oryzae_pv._oryzae_PXO99A 5
Xanthomonas_campestris_pv._campestris_str._B100 10
Thiocystis_violascens_DSM_198 0
Legionella_longbeachae_NSW150 1
gamma_proteobacterium_HdN1 1
Thiomicrospira_crunogena_XCL-2 0
Methanospirillum_hungatei_JF-1 0
Salinarchaeum_sp._Harcht-Bsk1 0
Halopiger_xanaduensis_SH-6 2
Haloterrigena_turkmenica_DSM_5511 1
Natrinema_sp._J7-2 0
Natrialba_magadii_ATCC_43099 1
Halorubrum_lacusprofundi_ATCC_49239 0
Halogeometricum_borinquense_DSM_11551 1
Haloferax_mediterranei_ATCC_33500 2
Haloferax_volcanii_DS2 0
Halomicrobium_mukohataei_DSM_12286 4
Natronomonas_pharaonis_DSM_2160 1
Haloarcula_hispanica_ATCC_33960 5
Haloarcula_marismortui_ATCC_43049 4
Halobacterium_salinarum_R1 4
Halobacterium_sp._NRC-1 4
Methanocaldococcus_fervens_AG86 1
Methanocaldococcus_vulcanius_M7 1
Methanothermococcus_okinawensis_IH1 0

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Strains
Genome     Number
Chroococcidiopsis_thermalis_PCC_7203 1
Chamaesiphon_minutus_PCC_6605 1
Synechocystis_sp._PCC_6803_substr._PCC-P 0
Synechocystis_sp._PCC_6803_substr._PCC-N 0
Synechocystis_sp._PCC_6803_substr._GT-I 0
Synechocystis_sp._PCC_6803 0
Synechococcus_sp._JA-2-3B'a(2-13) 0
Synechococcus_sp._PCC_7002 0
Synechococcus_elongatus_PCC_6301 0
Oscillatoria_acuminata_PCC_6304 1
Arthrospira_platensis_NIES-39 0
Cyanothece_sp._PCC_7822 1
Cyanothece_sp._PCC_7425 0
Cyanothece_sp._PCC_7424 1
Cyanothece_sp._ATCC_51142 2
Cyanothece_sp._PCC_8801 1
Cyanobacterium_aponinum_PCC_10605 1
Cyanobacterium_stanieri_PCC_7202 1
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 0
Stanieria_cyanosphaera_PCC_7437 1
Cylindrospermum_stagnale_PCC_7417 0
Anabaena_cylindrica_PCC_7122 0
Clostridium_thermocellum_DSM_1313 0
[Clostridium]_stercorarium_Clostridiu_subsp._stercorarium_DSM_8532 0
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 2
Salinibacter_ruber_DSM_13855 2
Rhodothermus_marinus_SG0.5JP17-172 3
Desulfovibrio_gigas_DSM_1382_=_ATCC_19364 0
Geobacter_sp._M18 1
Geobacter_sulfurreducens_PCA 2
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 1
Caulobacter_crescentus_CB15 6
Magnetospirillum_gryphiswaldense_MSR-1_v2 0
Gluconacetobacter_diazotrophicus_PAl_5 4
Gluconobacter_oxydans_H24 2
Methylobacterium_extorquens_DM4 1
Sinorhizobium_fredii_USDA_257 10
Sinorhizobium_fredii_HH103 9
Sinorhizobium_meliloti_2011 3
Sinorhizobium_meliloti_GR4 3
Sinorhizobium_meliloti_Rm41 3
Sinorhizobium_meliloti_SM11 3
Sinorhizobium_meliloti_BL225C 3
Sinorhizobium_meliloti_1021 3
Rhizobium_etli_CFN_42 16
Rhizobium_etli_bv._mimosae_str._Mim1 17
Rhizobium_tropici_CIAT_899 8
Rhizobium_leguminosarum_bv._trifolii_WSM2304 17
Rhizobium_leguminosarum_bv._trifolii_WSM1325 15
Rhodopseudomonas_palustris_TIE-1 0
Rhodopseudomonas_palustris_BisB5 1
Rhodopseudomonas_palustris_BisB18 6
Rhodopseudomonas_palustris_CGA009 0
Bradyrhizobium_sp._S23321 2
Bradyrhizobium_sp._BTAi1 1
Bradyrhizobium_oligotrophicum_S58 3
Aeromonas_hydrophila_ML09-119 1
Stenotrophomonas_maltophilia_D457 6
Stenotrophomonas_maltophilia_JV3 6
Stenotrophomonas_maltophilia_R551-3 6
Xanthomonas_citri_subsp._citri_Aw12879 12
Xanthomonas_campestris_pv._vesicatoria_str._85-10 11
Xanthomonas_axonopodis_pv._citrumelo_F1 11
Xanthomonas_axonopodis_Xac29-1 12
Xanthomonas_oryzae_pv._oryzicola_BLS256 9
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 4
Xanthomonas_oryzae_pv._oryzae_KACC_10331 5
Xanthomonas_campestris_pv._raphani_756C 9
Xanthomonas_campestris_pv._campestris_str._8004 9
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 9
Legionella_pneumophila_subsp._pneumophila 1
Halovivax_ruber_XH-70 1
Natronobacterium_gregoryi_SP2 7
Natronomonas_moolapensis_8.8.11 2
Haloarcula_hispanica_N601 5

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Others
Genome     Number
NCBI_plasmid_sequences_(Plasmids) 86
TargetDB__(Targets) 1
STRING_v9.0.5_(STRING) 326
Uniprot_2018_03_genome 53397
NCBI_2017_08_genome 13562

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