SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,46565,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

46565 - Chaperone J-domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   18
Pan_troglodytes_76_2.1.4   (Chimpanzee)   6
Gorilla_gorilla_76_3.1   (Western gorilla)   6
Pongo_abelii_76_2   (Sumatran orangutan)   6
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   7
Papio_anubis_76   (Olive baboon)   8
Macaca_mulatta_76_1   (Rhesus monkey)   9
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   12
Otolemur_garnettii_76_3   (Small-eared galago)   5
Microcebus_murinus_76_1   (Gray mouse lemur)   4
Rattus_norvegicus_76_5.0   (Norway rat)   5
Mus_musculus_76_38   (House mouse)   9
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   4
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   4
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   7
Cavia_porcellus_76_3   (Domestic guinea pig)   7
Oryctolagus_cuniculus_76_2   (Rabbit)   8
Ochotona_princeps_76   (American pika)   4
Tupaia_belangeri_76   (Northern tree shrew)   2
Sus_scrofa_76_10.2   (Pig)   4
Bos_taurus_76_3.1   (Cattle)   6
Ovis_aries_76_3.1   (Sheep)   6
Vicugna_pacos_76_1   (Alpaca)   3
Tursiops_truncatus_76_1   (Bottlenose dolphin)   4
Mustela_putorius_furo_76_1.0   (Domestic ferret)   6
Ailuropoda_melanoleuca_76_1   (Giant panda)   6
Canis_familiaris_76_3.1   (Dog)   7
Felis_catus_76_6.2   (Domestic cat)   5
Equus_caballus_76_2   (Horse)   5
Myotis_lucifugus_76_2.0   (Little brown bat)   6
Pteropus_vampyrus_76_1   (Large flying fox)   6
Sorex_araneus_76_1   (European shrew)   3
Erinaceus_europaeus_76   (Western European hedgehog)   4
Procavia_capensis_76_1   (Cape rock hyrax)   6
Loxodonta_africana_76_3   (African savanna elephant)   5
Echinops_telfairi_76   (Small Madagascar hedgehog)   4
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   4
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   3
Macropus_eugenii_76_1.0   (Tammar wallaby)   4
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   6
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   4
Ornithorhynchus_anatinus_76_5   (Platypus)   3
Saccoglossus_kowalevskii_v3.0 2
Petromyzon_marinus_76_7.0   (Sea lamprey)   1
Meleagris_gallopavo_76_2   (Turkey)   3
Gallus_gallus_76_4   (Chicken)   5
Anas_platyrhynchos_76_1.0   (Mallard)   1
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   2
Ficedula_albicollis_76_1.0   (Collared flycatcher)   3
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   5
Anolis_carolinensis_76_2.0   (Green anole)   5
Xenopus_laevis_   (African clawed frog)   5
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   6
Latimeria_chalumnae_76_1   (Coelacanth)   8
Lepisosteus_oculatus_76   (Spotted gar)   4
Gadus_morhua_76_1   (Atlantic cod)   4
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   5
Takifugu_rubripes_76_4   (Torafugu)   6
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   4
Oryzias_latipes_76_1   (Japanese medaka)   4
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   5
Poecilia_formosa_76   (Amazon molly)   5
Oreochromis_niloticus_76_1.0   (Nile tilapia)   5
Astyanax_mexicanus_76   (Mexican tetra)   5
Danio_rerio_76_9   (Zebrafish)   9
Oikopleura_dioica 1
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   1
Ciona_intestinalis_76   (Vase tunicate)   1
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   4
Adineta_vaga 9
Octopus_bimaculoides_280 3
Crassostrea_gigas_22   (Pacific oyster)   5
Lottia_gigantea_   (Owl limpet)   1
Helobdella_robusta_ 1
Capitella_sp._I_ 2
Danaus_plexippus_OGS1.0   (Monarch butterfly)   2
Heliconius_melpomene_   (Postman butterfly)   2
Bombyx_mori_   (Domestic silkworm)   3
Nasonia_vitripennis_   (Jewel wasp)   2
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   1
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   2
Linepithema_humile_v1.1   (Argentine ant)   2
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   2
Solenopsis_invicta_v.2.2.3   (Red fire ant)   1
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   2
Atta_cephalotes_v1.1 2
Camponotus_floridanus_v3.3   (Florida carpenter ant)   2
Lucilia_cuprina   (Australian sheep blowfly)   3
Drosophila_grimshawi_1.3 3
Drosophila_willistoni_1.3 3
Drosophila_pseudoobscura_2.13 4
Drosophila_persimilis_1.3 3
Drosophila_suzukii 3
Drosophila_yakuba_1.3 2
Drosophila_simulans_1.3 3
Drosophila_sechellia_1.3 3
Drosophila_melanogaster_76_5   (Fruit fly)   3
Drosophila_erecta_1.3 3
Drosophila_ananassae_1.3 3
Drosophila_virilis_1.2 3
Drosophila_mojavensis_1.3 3
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   3
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   3
Anopheles_darlingi_22   (American malaria mosquito)   2
Anopheles_gambiae_49_3j   (African malaria mosquito)   2
Tribolium_castaneum_3.0   (Red flour beetle)   2
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   1
Acyrthosiphon_pisum_   (Pea aphid)   3
Rhodnius_prolixus_22 2
Daphnia_pulex_   (Common water flea)   1
Strigamia_maritima_22 3
Sarcoptes_scabiei 1
Tetranychus_urticae_   (Two-spotted spider mite)   2
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   2
Pristionchus_pacificus_ 4
Meloidogyne_incognita_   (Southern root-knot nematode)   5
Meloidogyne_hapla_ 0
Onchocerca_volvulus_22 2
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   1
Caenorhabditis_japonica_ 2
Caenorhabditis_brenneri_ 5
Caenorhabditis_remanei_ 2
Caenorhabditis_elegans_76_235   (Roundworm)   10
Caenorhabditis_briggsae_2 3
Trichinella_spiralis_22 4
Hymenolepis_microstoma_ 2
Echinococcus_multilocularis_ 2
Echinococcus_granulosus_ 2
Taenia_solium_   (Pork tapeworm)   2
Schistosoma_mansoni_ 3
Mnemiopsis_leidyi   (Sea walnut)   3
Thelohanellus_kitauei 1
Acropora_digitifera_v1.0 6
Nematostella_vectensis_1.0   (Starlet sea anemone)   2
Hydra_vulgaris 1
Amphimedon_queenslandica 3
Trichoplax_adhaerens_ 2
Proterospongia_sp._ATCC_50818_ 6
Monosiga_brevicollis_ 8
Sphaeroforma_arctica_JP610_ 4
Capsaspora_owczarzaki_ATCC_30864_ 4
Conidiobolus_coronatus_NRRL28638_v1.0 4
Mortierella_verticillata_NRRL_6337_ 5
Phycomyces_blakesleeanus_ 3
Rhizopus_oryzae_RA_99-880_ 0
Mucor_circinelloides_ 3
Rhizomucor_miehei_CAU432_ 2
Malassezia_globosa_CBS_7966_ 4
Sporisorium_reilianum_22 7
Ustilago_maydis_ 7
Mixia_osmundae_IAM_14324_v1.0 5
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 6
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 5
Melampsora_laricis-populina_ 6
Rhodotorula_graminis_WP1_v1.0 3
Sporobolomyces_roseus_IAM_13481_ 2
Microbotryum_violaceum_22 7
Wallemia_sebi_v1.0 2
Sphaerobolus_stellatus_v1.0 3
Piloderma_croceum_F_1598_v1.0 3
Serpula_lacrymans_var._lacrymans_S7.9_ 2
Coniophora_puteana 5
Hydnomerulius_pinastri_v2.0 3
Paxillus_rubicundulus_Ve08.2h10_v1.0 3
Pisolithus_microcarpus_441_v1.0 3
Pisolithus_tinctorius_Marx_270_v1.0 3
Scleroderma_citrinum_Foug_A_v1.0 3
Coprinopsis_cinerea_okayama7_130_v3 6
Pleurotus_ostreatus_   (Oyster mushroom)   3
Amanita_thiersii_Skay4041_v1.0 3
Amanita_muscaria_Koide_v1.0   (Fly agaric)   4
Galerina_marginata_v1.0 5
Hebeloma_cylindrosporum_h7_v2.0 6
Laccaria_bicolor_S238N-H82_ 4
Agaricus_bisporus_var._bisporus_ 4
Schizophyllum_commune_ 4
Stereum_hirsutum_FP-91666_SS1__v1.0 6
Heterobasidion_annosum_ 3
Gloeophyllum_trabeumv1.0 3
Punctularia_strigosozonata_v1.0 4
Sebacina_vermifera_MAFF_305830_v1.0 4
Fomitiporia_mediterranea_v1.0 4
Tulasnella_calospora_AL13/4D_v1.0 2
Postia_placenta_ 3
Wolfiporia_cocos_MD-104_SS10__v1.0 4
Fomitopsis_pinicolav1.0 5
Fomitopsis_pinicola_FP-58527_SS1_v3.0 5
Phanerochaete_chrysosporium_RP-78_2.1 3
Dichomitus_squalens 4
Trametes_versicolor_v1.0 4
Tremella_mesenterica_   (Witches' butter)   4
Daldinia_eschscholzii_EC12_v1.0 3
Apiospora_montagnei_NRRL_25634_v1.0 5
Magnaporthe_poae_ATCC_64411_22 2
Magnaporthe_grisea_70-15_ 4
Podospora_anserina_ 3
Sporotrichum_thermophile_ATCC_42464_ 2
Thielavia_terrestris_NRRL_8126_ 3
Chaetomium_globosum_CBS_148.51_ 3
Neurospora_tetrasperma_ 3
Neurospora_discreta_FGSC_8579_ 1
Neurospora_crassa_OR74A_ 6
Cryphonectria_parasitica_   (Chestnut blight fungus)   2
Verticillium_albo-atrum_VaMs.102_ 3
Verticillium_dahliae_VdLs.17_ 6
Acremonium_alcalophilumv_1.0 4
Glomerella_graminicola_22 5
Fusarium_graminearum_ 5
Nectria_haematococca_mpVI_ 5
Fusarium_oxysporum_f._sp._lycopersici_4286_ 4
Fusarium_verticillioides_7600_ 5
Trichoderma_asperellum_CBS_433.97_v1.0 4
Trichoderma_atroviride_ 2
Trichoderma_citrinoviride_v1.0 4
Trichoderma_reesei_1.2 2
Trichoderma_virens_Gv29-8_ 5
Trichoderma_longibrachiatum_ATCC_18648_v1.0 2
Trichoderma_harzianum_CBS_226.95_v1.0 4
Amorphotheca_resinae_v1.0   (Creosote fungus)   4
Botrytis_cinerea_B05.10_ 4
Sclerotinia_sclerotiorum_ 5
Blumeria_graminis_22 4
Didymella_exigua_CBS_183.55_v1.0 4
Leptosphaeria_maculans_22 4
Setosphaeria_turcica_v1.0 4
Cochliobolus_miyabeanus_ATCC_44560_v1.0 4
Cochliobolus_victoriae_FI3_v1.0 6
Cochliobolus_carbonum_26-R-13_v1.0 5
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   6
Alternaria_brassicicola_ 4
Cochliobolus_lunatus_m118_v2.0 4
Pyrenophora_teres_f._teres_22 4
Pyrenophora_tritici-repentis_ 4
Stagonospora_nodorum_ 4
Mycosphaerella_graminicola_IPO323_ 1
Zasmidium_cellare_ATCC_36951_v1.0 3
Dothistroma_septosporum 2
Septoria_musiva_v1.0 2
Mycosphaerella_fijiensis_CIRAD86_ 3
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 3
Paracoccidioides_brasiliensis_Pb18_ 4
Coccidioides_posadasii_RMSCC_3488_ 2
Coccidioides_immitis_RS_ 2
Ajellomyces_dermatitidis_SLH14081_ 6
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 6
Microsporum_canis_CBS_113480_ 1
Trichophyton_equinum_CBS_127.97_ 1
Trichophyton_verrucosum_HKI_0517_ 1
Arthroderma_benhamiae_CBS_112371_ 1
Trichophyton_tonsurans_CBS_112818_ 1
Trichophyton_rubrum_CBS_118892_ 1
Uncinocarpus_reesii_1704_ 1
Aspergillus_zonatus_v1.0 3
Penicillium_chrysogenum_Wisconsin_54-1255_ 3
Penicillium_chrysogenum_v1.0 3
Aspergillus_acidus_v1.0 3
Aspergillus_fumigatus_Af293 4
Aspergillus_brasiliensis_v1.0 4
Aspergillus_nidulans_FGSC_A4_ 3
Aspergillus_sydowii_v1.0 2
Aspergillus_versicolor_v1.0 2
Aspergillus_glaucus 2
Aspergillus_carbonarius_ITEM_5010_ 2
Neosartorya_fischeri_NRRL_181_ 3
Aspergillus_terreus_NIH2624_ 2
Aspergillus_tubingensis_v1.0 3
Aspergillus_wentii_v1.0 3
Aspergillus_oryzae_RIB40_ 2
Aspergillus_niger_22 4
Aspergillus_niger_ATCC_1015_ 1
Aspergillus_flavus_NRRL3357_ 3
Aspergillus_clavatus_NRRL_1_ 2
Penicillium_marneffei_ATCC_18224_ 2
Tuber_melanosporum_Mel28_22 3
Tuber_melanosporum_Vittad_   (Perigord truffle)   3
Hansenula_polymorpha_v2.0 1
Dekkera_bruxellensis_CBS_2499_v2.0 0
Pichia_membranifaciensv1.0 2
Candida_tanzawaensis_NRRL_Y-17324__v1.0 1
Candida_dubliniensis_CD36_ 1
Candida_tropicalis_MYA-3404_ 3
Candida_parapsilosis_ 0
Candida_albicans_SC5314 1
Lodderomyces_elongisporus_NRRL_YB-4239_ 1
Pichia_stipitis_CBS_6054_ 0
Candida_guilliermondii_ATCC_6260_ 3
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 1
Debaromyces_hansenii 1
Wickerhamomyces_anomalus 1
Pichia_pastoris_GS115_ 0
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 0
Yarrowia_lipolytica_CLIB122 1
Candida_lusitaniae_ATCC_42720_ 2
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 1
Vanderwaltozyma_polyspora_DSM_70294_ 0
Candida_glabrata_CBS138 1
Kluyveromyces_thermotolerans_CBS_6340 1
Lachancea_kluyveri_ 0
Kluyveromyces_waltii 1
Ashbya_gossypii_ATCC_10895_ 1
Zygosaccharomyces_rouxii_ 1
Saccharomyces_mikatae_MIT 1
Saccharomyces_paradoxus_MIT 1
Saccharomyces_cerevisiae_76   (Baker's yeast)   1
Saccharomyces_bayanus_MIT 2
Kluyveromyces_lactis 2
Schizosaccharomyces_cryophilus_OY26_22 1
Schizosaccharomyces_octosporus_yFS286_ 1
Schizosaccharomyces_japonicus_yFS275_ 1
Schizosaccharomyces_pombe   (Fission yeast)   1
Catenaria_anguillulae_PL171_v1.0 4
Allomyces_macrogynus_ATCC_38327_ 11
Spizellomyces_punctatus_DAOM_BR117_ 5
Dictyostelium_discoideum 3
Dictyostelium_purpureum_ 3
Entamoeba_dispar_1.2 0
Entamoeba_invadens_1.2 1
Entamoeba_histolytica_1 1
Selaginella_moellendorffii_ 8
Pinus_taeda   (Loblolly pine)   8
Picea_abies   (Norway spruce)   4
Eucalyptus_grandis_v201   (Rose gum)   16
Theobroma_cacao_B97-61/B2_v1   (Cacao)   12
Gossypium_raimondii_v221 36
Citrus_clementina_v165 18
Citrus_sinensis_v154   (Sweet orange)   27
Thellungiella_halophila_v173 21
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   18
Capsella_rubella_v183 30
Arabidopsis_lyrata_   (Lyrate rockcress)   12
Arabidopsis_thaliana_10   (Thale cress)   21
Carica_papaya_   (Papaya)   10
Medicago_truncatula_   (Barrel medic)   20
Phaseolus_vulgaris_v186   (French bean)   16
Glycine_max_v109   (Soybean)   33
Cucumis_sativus_v122   (Cucumber)   18
Fragaria_vesca_   (Wild strawberry)   20
Malus_domestica_v196   (Apple)   31
Prunus_persica_v139   (Peach)   8
Linum_usitatissimum_v200   (Flax)   36
Manihot_esculenta_v147   (Cassava)   19
Populus_trichocarpa_v156   (Black cottonwood)   18
Vitis_vinifera_   (Wine grape)   13
Mimulus_guttatus_v140   (Spotted monkey flower)   22
Solanum_lycopersicum_v.2.3   (Tomato)   16
Solanum_tuberosum_   (Potato)   22
Actinidia_chinensis_Hongyang_ 31
Aquilegia_coerulea_v195 18
Triticum_urartu_22 11
Triticum_aestivum_22   (Bread wheat)   26
Aegilops_tauschii_22 14
Brachypodium_distachyon_   (Stiff brome)   20
Oryza_barthii_22   (African wild rice)   22
Oryza_meridionalis_22 14
Oryza_glumaepatula_22 16
Oryza_glaberrima   (African rice)   13
Oryza_punctata_22 22
Oryza_nivara_22 23
Oryza_brachyantha_22   (Malo sina)   13
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   25
Oryza_sativa_v193   (Rice)   24
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   23
Panicum_virgatum_v202   (Switchgrass)   29
Setaria_italica_v164   (Foxtail millet)   17
Zea_mays_subsp._mays_   (Maize)   23
Zea_mays_v181   (Maize)   23
Sorghum_bicolor_   (Sorghum)   16
Musa_balbisiana   (Balbis banana)   27
Musa_acuminata_22   (Wild Malaysian banana)   19
Amborella_trichopoda_22 7
Physcomitrella_patens 8
Coccomyxa_subellipsoidea_sp._C-169_v2 4
Asterochloris_sp._Cgr/DA1pho_v1.0 5
Chlorella_variabilis_sp._NC64A_ 8
Chlorella_vulgaris_ 4
Volvox_carteri_f._nagariensis_ 2
Volvox_carteri_v199 5
Chlamydomonas_reinhardtii_4.0 8
Ostreococcus_sp._RCC809_ 4
Ostreococcus_lucimarinus_CCE9901_ 8
Ostreococcus_tauri_ 10
Bathycoccus_prasinos_ 11
Micromonas_sp._RCC299_ 9
Micromonas_pusilla_CCMP1545_v3.0 9
Cyanidioschyzon_merolae_strain_10D_22 3
Cyanidioschyzon_merolae 3
Porphyridium_purpureum_02_2012 4
Thecamonas_trahens_ATCC_50062_ 2
Bigelowiella_natans_CCMP2755_22 17
Giardia_lamblia_2.3 0
Cyanophora_paradoxa_ 3
Leishmania_mexicana_2.4 11
Leishmania_major_strain_Friedlin_ 12
Leishmania_infantum_JPCM5_2.4 13
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 11
Trypanosoma_vivax_ 13
Trypanosoma_cruzi_strain_CL_Brener 9
Trypanosoma_congolense_2.4 11
Trypanosoma_brucei_gambiense_v4.1 12
Trypanosoma_brucei_TREU927_v4.1 13
Ectocarpus_siliculosus 7
Aureococcus_anophagefferens_ 10
Albugo_laibachii_22 3
Pythium_iwayamai_DAOM_BR242034_22 5
Pythium_arrhenomanes_ATCC_12531_22 4
Pythium_ultimum_v1.7-2 5
Pythium_aphanidermatum_DAOM_BR444_22 3
Pythium_irregulare_DAOM_BR486_22 6
Pythium_vexans_DAOM_BR484_22 7
Phytophthora_ramorum_1.1   (Sudden oak death agent)   4
Phytophthora_sojae_1.1 4
Phytophthora_infestans_T30-4_ 5
Phytophthora_capsici_ 1
Hyaloperonospora_arabidopsidis_22 3
Phaeodactylum_tricornutumCCAP_1055/1 7
Fragilariopsis_cylindrus 15
Thalassiosira_pseudonana_CCMP1335 12
Perkinsus_marinus_ATCC_50983_ 11
Paramecium_tetraurelia_ 1
Tetrahymena_thermophila_SB210_1_ 5
Ichthyophthirius_multifiliis_strain_G5_ 2
Cryptosporidium_hominis 3
Cryptosporidium_muris 5
Cryptosporidium_parvum_Iowa_II 4
Neospora_caninum 10
Toxoplasma_gondii_VEG 10
Toxoplasma_gondii_ME49 10
Toxoplasma_gondii_GT1 9
Babesia_bovis_T2Bo_ 10
Theileria_parva__ 3
Theileria_annulata 5
Plasmodium_falciparum_3D7_ 21
Plasmodium_vivax_SaI-1_7.0 9
Plasmodium_knowlesi_strain_H_ 9
Plasmodium_yoelii_ssp._yoelii_1_ 9
Plasmodium_chabaudi_ 9
Plasmodium_berghei_ANKA_ 9
Symbiodinium_minutum_clade_B1_v1.2 60
Naegleria_gruberi_ 2
Guillardia_theta_CCMP2712_v1.0_ 13
Emiliania_huxleyi_CCMP1516_ 20
Synechocystis_sp._PCC_6803 1
Synechococcus_sp._PCC_7502 1
Cyanothece_sp._PCC_8802 2
Halothece_sp._PCC_7418 1
Microcystis_aeruginosa_NIES-843 1
Rivularia_sp._PCC_7116 1
Calothrix_sp._PCC_7507 1
Anabaena_variabilis_ATCC_29413 1
Nostoc_punctiforme_PCC_73102 1
Nostoc_sp._PCC_7120 1
Nostoc_sp._PCC_7524 1
Catenulispora_acidiphila_DSM_44928 0
Streptomyces_avermitilis_MA-4680 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1
Streptomyces_scabiei_87.22 1
Rhodococcus_jostii_RHA1 1
Thermomicrobium_roseum_DSM_5159 1
Alkaliphilus_oremlandii_OhILAs 1
Clostridium_ljungdahlii_DSM_13528 1
Thermodesulfobium_narugense_DSM_14796 1
Pelodictyon_phaeoclathratiforme_BU-1 1
Flexibacter_litoralis_DSM_6794 1
Dyadobacter_fermentans_DSM_18053 1
Spirosoma_linguale_DSM_74 1
Runella_slithyformis_DSM_19594 1
Porphyromonas_asaccharolytica_DSM_20707 1
Zobellia_galactanivorans 1
Flavobacterium_indicum_GPTSA100-9 0
Flavobacterium_psychrophilum_JIP02/86 1
Flavobacterium_branchiophilum_FL-15 1
Waddlia_chondrophila_WSU_86-1044 1
Parachlamydia_acanthamoebae_UV-7 1
Isosphaera_pallida_ATCC_43644 1
Planctomyces_limnophilus_DSM_3776 1
Terriglobus_roseus_DSM_18391 1
Acidithiobacillus_ferrivorans_SS3 1
Bdellovibrio_bacteriovorus_HD100 1
Arcobacter_nitrofigilis_DSM_7299 1
Syntrophobacter_fumaroxidans_MPOB 1
Babela_massiliensis 1
Haliangium_ochraceum_DSM_14365 1
Sorangium_cellulosum_'So_ce_56' 0
Stigmatella_aurantiaca_DW4/3-1 0
Corallococcus_coralloides_DSM_2259 0
Myxococcus_fulvus_HW-1 1
Thauera_sp._MZ1T 1
Azoarcus_sp._KH32C 1
Aromatoleum_aromaticum_EbN1 1
Thiomonas_arsenitoxydans 1
Ralstonia_pickettii_12D 1
Burkholderia_ambifaria_AMMD 1
Burkholderia_cenocepacia_HI2424 1
Burkholderia_multivorans_ATCC_17616 1
Burkholderia_vietnamiensis_G4 1
Burkholderia_gladioli_BSR3 1
Burkholderia_glumae_BGR1 1
Alicycliphilus_denitrificans_K601 1
Collimonas_fungivorans_Ter331 1
Herbaspirillum_seropedicae_SmR1 1
Nitrosomonas_sp._Is79A3 1
Nitrosomonas_eutropha_C91 1
Nitrosomonas_europaea_ATCC_19718 1
Starkeya_novella_DSM_506 1
Beijerinckia_indica_subsp._indica_ATCC_9039 1
Gallibacterium_anatis_UMN179 0
Photobacterium_profundum_SS9 1
Psychromonas_ingrahamii_37 1
Shewanella_oneidensis_MR-1 1
Xanthomonas_albilineans_GPE_PC73 1
Xanthomonas_oryzae_pv._oryzae_PXO99A 1
Thiocystis_violascens_DSM_198 1
Nitrosococcus_oceani_ATCC_19707 0
Legionella_longbeachae_NSW150 1
Photorhabdus_luminescens_subsp._laumondii_TTO1 1
Yersinia_pseudotuberculosis_IP_31758 1
Yersinia_pestis_Pestoides_F 1
Yersinia_enterocolitica_subsp._enterocolitica_8081 1
Erwinia_tasmaniensis_Et1/99 1
Shigella_boydii_CDC_3083-94 1
Salmonella_bongori_NCTC_12419 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 1
Enterobacter_sp._638 1
Enterobacter_asburiae_LF7a 1
Enterobacter_cloacae_subsp._dissolvens_SDM 1
Citrobacter_rodentium_ICC168 1
Citrobacter_koseri_ATCC_BAA-895 1
Pseudomonas_syringae_pv._tomato_str._DC3000 2
Acinetobacter_oleivorans_DR1 1
Acinetobacter_calcoaceticus_PHEA-2 1
Acinetobacter_baumannii_ATCC_17978 1
Acinetobacter_sp._ADP1 1
Methanospirillum_hungatei_JF-1 1
Methanobrevibacter_ruminantium_M1 1

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   14
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   4
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   4
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   2
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   5
Cryptococcus_neoformans_var._grubii_H99_ 2
Cryptococcus_neoformans_B-3501A_ 2
Cryptococcus_neoformans_JEC21_ 3
Paracoccidioides_brasiliensis_Pb01_ 3
Paracoccidioides_brasiliensis_Pb03_ 3
Coccidioides_posadasii_str._Silveira_ 2
Coccidioides_immitis_RMSCC_3703_ 0
Coccidioides_immitis_RMSCC_2394_ 2
Coccidioides_immitis_H538.4_ 2
Ajellomyces_dermatitidis_ER-3_ 5
Histoplasma_capsulatum_H143 4
Histoplasma_capsulatum_H88 5
Histoplasma_capsulatum_G186AR 4
Aspergillus_fumigatus_A1163_ 4
Candida_albicans_WO-1_ 1
Saccharomyces_cerevisiae_UC5 1
Saccharomyces_cerevisiae_PW5 1
Saccharomyces_cerevisiae_FL100 1
Saccharomyces_cerevisiae_CBS7960 1
Saccharomyces_cerevisiae_YJM269 0
Saccharomyces_cerevisiae_T7 1
Saccharomyces_cerevisiae_FostersB 1
Saccharomyces_cerevisiae_FostersO 0
Saccharomyces_cerevisiae_VL3 0
Saccharomyces_cerevisiae_Vin13 0
Saccharomyces_cerevisiae_AWRI796 0
Saccharomyces_cerevisiae_Sigma1278b 1
Saccharomyces_cerevisiae_W303 1
Saccharomyces_cerevisiae_JAY291 1
Saccharomyces_cerevisiae_AWRI1631 1
Saccharomyces_cerevisiae_YPS163 1
Saccharomyces_cerevisiae_M22 1
Saccharomyces_cerevisiae_T73 0
Saccharomyces_cerevisiae_CLIB215 1
Saccharomyces_cerevisiae_YJM789_ 1
Saccharomyces_cerevisiae_YJM789 1
Saccharomyces_cerevisiae_RM11-1a 1
Saccharomyces_cerevisiae_RM11-1a_ 1
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   1
Schizosaccharomyces_pombe_972h-_ 1
Batrachochytrium_dendrobatidis_JEL423_ 8
Batrachochytrium_dendrobatidis_JAM81_ 5
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   12
Hordeum_vulgare_22   (Domesticated barley)   15
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   18
Trypanosoma_brucei_Lister_427_v4.1 12
Neospora_caninum_Nc-Liverpool_6.2 10
Plasmodium_falciparum_HB3_ 21
Plasmodium_falciparum_Dd2_ 8
Chroococcidiopsis_thermalis_PCC_7203 1
Chamaesiphon_minutus_PCC_6605 1
Synechocystis_sp._PCC_6803_substr._PCC-P 1
Synechocystis_sp._PCC_6803_substr._PCC-N 1
Synechocystis_sp._PCC_6803_substr._GT-I 1
Synechocystis_sp._PCC_6803 1
Dactylococcopsis_salina_PCC_8305 1
Cyanothece_sp._ATCC_51142 2
Cyanothece_sp._PCC_8801 2
Stanieria_cyanosphaera_PCC_7437 1
Anabaena_cylindrica_PCC_7122 1
Streptomyces_albus_J1074 1
Streptomyces_fulvissimus_DSM_40593 1
Clostridium_autoethanogenum_DSM_10061 1
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_Tc-4-1 1
Salinibacter_ruber_DSM_13855 1
Emticicia_oligotrophica_DSM_17448 1
Acidithiobacillus_ferrooxidans_ATCC_23270 1
Bdellovibrio_bacteriovorus_str._Tiberius 1
Desulfovibrio_gigas_DSM_1382_=_ATCC_19364 1
Sorangium_cellulosum_So0157-2 0
Anaeromyxobacter_dehalogenans_2CP-C 1
Myxococcus_stipitatus_DSM_14675 1
Ralstonia_pickettii_12J 1
Ralstonia_solanacearum_CMR15 1
Burkholderia_sp._KJ006 1
Burkholderia_lata 1
Burkholderia_ambifaria_MC40-6 1
Burkholderia_cenocepacia_MC0-3 1
Burkholderia_cenocepacia_AU_1054 1
Burkholderia_cenocepacia_J2315 1
Burkholderia_multivorans_ATCC_17616 1
Burkholderia_cepacia_GG4 1
Alicycliphilus_denitrificans_BC 1
Variovorax_paradoxus_B4 1
Nitrosomonas_sp._AL212 1
Zymomonas_mobilis_subsp._mobilis_ATCC_29191 0
Sinorhizobium_fredii_HH103 1
Shewanella_putrefaciens_200 1
Xanthomonas_oryzae_pv._oryzicola_BLS256 1
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 1
Xanthomonas_oryzae_pv._oryzae_KACC_10331 1
Yersinia_pseudotuberculosis_PB1/+ 1
Yersinia_pseudotuberculosis_YPIII 1
Yersinia_pestis_biovar_Microtus_str._91001 1
Yersinia_pestis_A1122 1
Yersinia_pestis_Z176003 1
Yersinia_pestis_D182038 1
Yersinia_pestis_D106004 1
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 1
Yersinia_pestis_Nepal516 1
Yersinia_pestis_Antiqua 1
Yersinia_pestis_Angola 1
Yersinia_pestis_CO92 1
Yersinia_pestis_KIM10+ 1
Yersinia_enterocolitica_subsp._palearctica_105.5R(r) 1
Yersinia_enterocolitica_subsp._palearctica_Y11 1
Salmonella_bongori_N268-08 1
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 1
Salmonella_enterica_subsp._enterica_serovar_4,[5],12:i:-_str._08-1736 1
Salmonella_enterica_subsp._enterica_serovar_Javiana_str._CFSAN001992 1
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 1
Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 1
Salmonella_enterica_subsp._enterica_serovar_Enteritidis_str._P125109 1
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 1
Salmonella_enterica_subsp._enterica_serovar_Newport_str._USMARC-S3124.1 1
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 1
Salmonella_enterica_subsp._enterica_serovar_Dublin_str._CT_02021853 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_var._5-_str._CFSAN001921 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._798 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 1
Salmonella_enterica_The_genome_of__subsp._enterica_serovar_Typhimurium_str._DT2 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_Definitive_Type_104 1
Salmonella_enterica_serovar_Bovismorbificans_genomics 1
Salmonella_enterica_subsp._enterica_serovar_Bareilly_str._CFSAN000189 1
Salmonella_enterica_subsp._enterica_serovar_Agona_str._24249 1
Salmonella_enterica_subsp._enterica_serovar_Agona_str._SL483 1
Salmonella_enterica_subsp._enterica_serovar_Weltevreden_str._2007-60-3289-1 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_B_str._SPB7 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._AKU_12601 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._ATCC_9150 1
Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._B182 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 1
Salmonella_enterica_subsp._enterica_serovar_Pullorum_str._S06004 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._CDC1983-67 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._RKS5078 1
Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum_str._287/91 1
Escherichia_coli_UMN026 1
Enterobacter_cloacae_SCF1 1
Enterobacter_cloacae_EcWSU1 1
Enterobacter_cloacae_subsp._cloacae_ENHKU01 1
Enterobacter_cloacae_subsp._cloacae_NCTC_9394 1
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 1
Pseudomonas_syringae_pv._phaseolicola_1448A 2
Pseudomonas_syringae_pv._syringae_B728a 1
Acinetobacter_genomosp._13TU__RUH2624 1
Acinetobacter_calcoaceticus_ruh2202 1
Acinetobacter_baumannii_ZW85-1 1
Acinetobacter_baumannii_TYTH-1 1
Acinetobacter_baumannii_BJAB0868 1
Acinetobacter_baumannii_BJAB0715 1
Acinetobacter_baumannii_BJAB07104 1
Acinetobacter_baumannii_TCDC-AB0715 1
Acinetobacter_baumannii_D1279779 1
Acinetobacter_baumannii_MDR-TJ 1
Acinetobacter_baumannii_1656-2 1
Acinetobacter_baumannii__ATCC_19606 1
Acinetobacter_baumannii_AB307-0294 1
Acinetobacter_baumannii_AYE 1
Acinetobacter_baumannii_MDR-ZJ06 1
Acinetobacter_baumannii_ACICU 1
Acinetobacter_radioresistens__SH164 1
Acinetobacter_junii__SH205 1
Acinetobacter_johnsonii__SH046 1

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   9
Pan_troglodytes_69_2.1.4   (Chimpanzee)   6
Gorilla_gorilla_69_3.1   (Western gorilla)   5
Pongo_abelii_69_2   (Sumatran orangutan)   6
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   7
Macaca_mulatta_69_1   (Rhesus monkey)   8
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   8
Otolemur_garnettii_69_3   (Small-eared galago)   5
Microcebus_murinus_69_1   (Gray mouse lemur)   4
Rattus_norvegicus_69_3.4   (Norway rat)   7
Mus_musculus_69_38   (House mouse)   6
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   4
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   4
Cavia_porcellus_69_3   (Domestic guinea pig)   7
Oryctolagus_cuniculus_69_2   (Rabbit)   7
Ochotona_princeps_69   (American pika)   4
Tupaia_belangeri_69   (Northern tree shrew)   2
Sus_scrofa_69_10.2   (Pig)   4
Bos_taurus_69_3.1   (Cattle)   6
Vicugna_pacos_69_1   (Alpaca)   3
Tursiops_truncatus_69_1   (Bottlenose dolphin)   4
Mustela_putorius_furo_69_1.0   (Domestic ferret)   6
Ailuropoda_melanoleuca_69_1   (Giant panda)   6
Canis_familiaris_69_3.1   (Dog)   7
Felis_catus_69   (Domestic cat)   4
Equus_caballus_69_2   (Horse)   5
Myotis_lucifugus_69_2.0   (Little brown bat)   6
Pteropus_vampyrus_69_1   (Large flying fox)   6
Sorex_araneus_69_1   (European shrew)   3
Erinaceus_europaeus_69   (Western European hedgehog)   4
Procavia_capensis_69_1   (Cape rock hyrax)   6
Loxodonta_africana_69_3   (African savanna elephant)   5
Echinops_telfairi_69   (Small Madagascar hedgehog)   4
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   4
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   3
Macropus_eugenii_69_1.0   (Tammar wallaby)   4
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   5
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   4
Ornithorhynchus_anatinus_69_5   (Platypus)   2
Petromyzon_marinus_69_7.0   (Sea lamprey)   1
Meleagris_gallopavo_69_2   (Turkey)   3
Gallus_gallus_69_2   (Chicken)   2
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   2
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   5
Anolis_carolinensis_69_2.0   (Green anole)   5
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   5
Latimeria_chalumnae_69_1   (Coelacanth)   7
Gadus_morhua_69_1   (Atlantic cod)   4
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   4
Takifugu_rubripes_69_4   (Torafugu)   5
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   4
Oryzias_latipes_69_1   (Japanese medaka)   4
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   5
Oreochromis_niloticus_69_1.0   (Nile tilapia)   5
Danio_rerio_69_9   (Zebrafish)   7
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   1
Ciona_intestinalis_69   (Vase tunicate)   1
Drosophila_melanogaster_69_5   (Fruit fly)   3
Caenorhabditis_elegans_69_215   (Roundworm)   2
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   1
Arabidopsis_thaliana_10   (Thale cress)   17

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   17
Homo_sapiens__(NCBI_version)   (Human)   9
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   6
Loa_loa_v3.3_(Request)   (Eye worm)   3
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   1
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   2
Moniliophthora_perniciosa_FA553__(Genome_survey) 3
Encephalitozoon_intestinalis__(endoparasite) 1
Encephalitozoon_cuniculi_(endoparasite) 1
Picea_sitchensis__(Incomplete)   (Sitka spruce)   1
Lotus_japonicus__(Early_assembly) 13
Malus_x_domestica_(Duplicate)   (Apple)   31
Ricinus_communis__(Early_assembly)   (Castor bean)   13
Nicotiana_benthamiana_0.4.4_(Early_draft) 38
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   17
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   16
Phoenix_dactylifera__(Early_draft)   (Date palm)   8
NCBI_plasmid_sequences_(Plasmids) 9
Protozoadb_2010_08_(Protozoadb) 236
STRING_v9.0.5_(STRING) 656
Uniprot_2018_03_genome 48405
NCBI_2017_08_genome 18308
Protein_Data_Bank_(all_PDB_sequenc) 2
UniProt__viral_sequences_(Viral) 9
NCBI_viral_sequences_(Viral) 9
TargetDB__(Targets) 47

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