SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,46934,_gap_,117839,_gap_,56204,56204 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

46934 - UBA-like
117839 - WWE domain
56204 - Hect, E3 ligase catalytic domain
56204 - Hect, E3 ligase catalytic domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Tupaia_belangeri_76   (Northern tree shrew)   1
Echinops_telfairi_76   (Small Madagascar hedgehog)   1

Longest transcript per gene
Genome     Number
Tupaia_belangeri_69   (Northern tree shrew)   1
Echinops_telfairi_69   (Small Madagascar hedgehog)   1

Others
Genome     Number
NCBI_2017_08_genome 1

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