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Domain combinations for _gap_,47031,50729,_gap_,109880,109885,109885,_gap_,47220,47220,109885,_gap_,47220,47220,47220,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

47031 - Second domain of FERM
50729 - PH domain-like
109880 - A middle domain of Talin 1
109885 - I/LWEQ domain
109885 - I/LWEQ domain
47220 - alpha-catenin/vinculin-like
47220 - alpha-catenin/vinculin-like
109885 - I/LWEQ domain
47220 - alpha-catenin/vinculin-like
47220 - alpha-catenin/vinculin-like
47220 - alpha-catenin/vinculin-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Macropus_eugenii_76_1.0   (Tammar wallaby)   0
Latimeria_chalumnae_76_1   (Coelacanth)   0
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   2
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   0
Poecilia_formosa_76   (Amazon molly)   0
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   0
Ciona_intestinalis_76   (Vase tunicate)   0
Tribolium_castaneum_3.0   (Red flour beetle)   0

Longest transcript per gene
Genome     Number
Macropus_eugenii_69_1.0   (Tammar wallaby)   0
Latimeria_chalumnae_69_1   (Coelacanth)   0
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   1
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   0
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   0
Ciona_intestinalis_69   (Vase tunicate)   0

Others
Genome     Number
Uniprot_2018_03_genome 238
NCBI_2017_08_genome 2
STRING_v9.0.5_(STRING) 1

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