SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain combinations for _gap_,47031,50729,_gap_,50156,52799 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

47031 - Second domain of FERM
50729 - PH domain-like
50156 - PDZ domain-like
52799 - (Phosphotyrosine protein) phosphatases II

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Jump to [ Top of page · Domain combinations in individual genomes ]

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Ochotona_princeps_76   (American pika)   2
Tupaia_belangeri_76   (Northern tree shrew)   1
Erinaceus_europaeus_76   (Western European hedgehog)   1
Procavia_capensis_76_1   (Cape rock hyrax)   0
Gadus_morhua_76_1   (Atlantic cod)   1
Anopheles_darlingi_22   (American malaria mosquito)   0

Longest transcript per gene
Genome     Number
Ochotona_princeps_69   (American pika)   2
Tupaia_belangeri_69   (Northern tree shrew)   1
Erinaceus_europaeus_69   (Western European hedgehog)   1
Procavia_capensis_69_1   (Cape rock hyrax)   0
Gadus_morhua_69_1   (Atlantic cod)   1

Others
Genome     Number
NCBI_2017_08_genome 11
Uniprot_2018_03_genome 100

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]