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Domain combinations for _gap_,47031,50729,_gap_,50729 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

47031 - Second domain of FERM
50729 - PH domain-like
50729 - PH domain-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Mustela_putorius_furo_76_1.0   (Domestic ferret)   1
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   2
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   1
Adineta_vaga 1
Helobdella_robusta_ 2
Danaus_plexippus_OGS1.0   (Monarch butterfly)   1
Drosophila_grimshawi_1.3 1
Drosophila_willistoni_1.3 1
Drosophila_virilis_1.2 1
Meloidogyne_hapla_ 1
Caenorhabditis_japonica_ 1
Caenorhabditis_brenneri_ 1
Caenorhabditis_remanei_ 1
Caenorhabditis_elegans_76_235   (Roundworm)   2
Caenorhabditis_briggsae_2 1
Hydra_vulgaris 1
Trichoplax_adhaerens_ 1

Strains
Genome     Number
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   1
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   1

Longest transcript per gene
Genome     Number
Mustela_putorius_furo_69_1.0   (Domestic ferret)   1
Caenorhabditis_elegans_69_215   (Roundworm)   1

Others
Genome     Number
STRING_v9.0.5_(STRING) 12
Uniprot_2018_03_genome 1274
NCBI_2017_08_genome 148
TargetDB__(Targets) 1

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