SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,47095,47095,47095,47095,47095,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

47095 - HMG-box
47095 - HMG-box
47095 - HMG-box
47095 - HMG-box
47095 - HMG-box

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Erinaceus_europaeus_76   (Western European hedgehog)   1
Xenopus_laevis_   (African clawed frog)   9
Takifugu_rubripes_76_4   (Torafugu)   1
Capitella_sp._I_ 1
Strigamia_maritima_22 1
Sarcoptes_scabiei 1
Phytophthora_sojae_1.1 0

Longest transcript per gene
Genome     Number
Erinaceus_europaeus_69   (Western European hedgehog)   1

Others
Genome     Number
STRING_v9.0.5_(STRING) 0
Uniprot_2018_03_genome 357
NCBI_2017_08_genome 41

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