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Domain combinations for _gap_,47353,_gap_,57667,57667,57667,57667,57667,57667,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

47353 - Retrovirus capsid dimerization domain-like
57667 - beta-beta-alpha zinc fingers
57667 - beta-beta-alpha zinc fingers
57667 - beta-beta-alpha zinc fingers
57667 - beta-beta-alpha zinc fingers
57667 - beta-beta-alpha zinc fingers
57667 - beta-beta-alpha zinc fingers

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   2
Pan_troglodytes_76_2.1.4   (Chimpanzee)   1
Gorilla_gorilla_76_3.1   (Western gorilla)   1
Papio_anubis_76   (Olive baboon)   2
Macaca_mulatta_76_1   (Rhesus monkey)   1
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   1
Tursiops_truncatus_76_1   (Bottlenose dolphin)   1
Equus_caballus_76_2   (Horse)   1
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   1

Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   1
Pan_troglodytes_69_2.1.4   (Chimpanzee)   1
Gorilla_gorilla_69_3.1   (Western gorilla)   1
Macaca_mulatta_69_1   (Rhesus monkey)   1
Tursiops_truncatus_69_1   (Bottlenose dolphin)   1
Equus_caballus_69_2   (Horse)   1
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   1

Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   2
STRING_v9.0.5_(STRING) 5
Uniprot_2018_03_genome 1026
NCBI_2017_08_genome 31

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