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Domain combinations for _gap_,47473,_gap_,55781,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

47473 - EF-hand
55781 - GAF domain-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Pongo_abelii_76_2   (Sumatran orangutan)   1
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   1
Otolemur_garnettii_76_3   (Small-eared galago)   1
Sus_scrofa_76_10.2   (Pig)   1
Felis_catus_76_6.2   (Domestic cat)   1
Meleagris_gallopavo_76_2   (Turkey)   1
Latimeria_chalumnae_76_1   (Coelacanth)   1
Lepisosteus_oculatus_76   (Spotted gar)   1
Lottia_gigantea_   (Owl limpet)   1
Capitella_sp._I_ 1
Nematostella_vectensis_1.0   (Starlet sea anemone)   1

Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   1

Longest transcript per gene
Genome     Number
Pongo_abelii_69_2   (Sumatran orangutan)   1
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   1
Otolemur_garnettii_69_3   (Small-eared galago)   1
Sus_scrofa_69_10.2   (Pig)   1
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   1
Meleagris_gallopavo_69_2   (Turkey)   1
Latimeria_chalumnae_69_1   (Coelacanth)   1

Others
Genome     Number
STRING_v9.0.5_(STRING) 4
Uniprot_2018_03_genome 377
NCBI_2017_08_genome 123

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