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Domain combinations for _gap_,47576,52540,52540,52540,52540,52540,52540,52540,52540,52540,52540,52540,52540,52540,52540,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

47576 - Calponin-homology domain, CH-domain
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Rattus_norvegicus_76_5.0   (Norway rat)   0
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   0
Cavia_porcellus_76_3   (Domestic guinea pig)   1
Canis_familiaris_76_3.1   (Dog)   0
Procavia_capensis_76_1   (Cape rock hyrax)   1
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   0
Nematostella_vectensis_1.0   (Starlet sea anemone)   0

Longest transcript per gene
Genome     Number
Canis_familiaris_69_3.1   (Dog)   0
Procavia_capensis_69_1   (Cape rock hyrax)   1
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   1
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   0
Gallus_gallus_69_2   (Chicken)   1

Others
Genome     Number
STRING_v9.0.5_(STRING) 2
Uniprot_2018_03_genome 183
NCBI_2017_08_genome 14

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