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Home > SCOP hierarchy > Domain combination - _gap_,47616,_gap_,57770,52374,47323,47060

Domain combinations for _gap_,47616,_gap_,57770,52374,47323,47060 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

47616 - GST C-terminal domain-like
57770 - Methionyl-tRNA synthetase (MetRS), Zn-domain
52374 - Nucleotidylyl transferase
47323 - Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
47060 - S15/NS1 RNA-binding domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Homo_sapiens_76_38 (Human) 1

Pan_troglodytes_76_2.1.4 (Chimpanzee) 1

Gorilla_gorilla_76_3.1 (Western gorilla) 1

Pongo_abelii_76_2 (Sumatran orangutan) 1

Nomascus_leucogenys_76_1.0 (Northern white-cheeked gibbon) 1

Papio_anubis_76 (Olive baboon) 1

Macaca_mulatta_76_1 (Rhesus monkey) 1

Otolemur_garnettii_76_3 (Small-eared galago) 1

Rattus_norvegicus_76_5.0 (Norway rat) 1

Mus_musculus_76_38 (House mouse) 2

Dipodomys_ordii_76_1 (Ord's kangaroo rat) 1

Ictidomys_tridecemlineatus_76_2 (Thirteen-lined ground squirrel) 1

Heterocephalus_glaber_v1.7-2 (Naked mole-rat) 1

Cavia_porcellus_76_3 (Domestic guinea pig) 1

Oryctolagus_cuniculus_76_2 (Rabbit) 1

Ochotona_princeps_76 (American pika) 1

Sus_scrofa_76_10.2 (Pig) 1

Bos_taurus_76_3.1 (Cattle) 1

Ovis_aries_76_3.1 (Sheep) 1

Mustela_putorius_furo_76_1.0 (Domestic ferret) 1

Ailuropoda_melanoleuca_76_1 (Giant panda) 1

Canis_familiaris_76_3.1 (Dog) 1

Felis_catus_76_6.2 (Domestic cat) 1

Equus_caballus_76_2 (Horse) 1

Myotis_lucifugus_76_2.0 (Little brown bat) 1

Erinaceus_europaeus_76 (Western European hedgehog) 1

Loxodonta_africana_76_3 (African savanna elephant) 1

Dasypus_novemcinctus_76_2 (Nine-banded armadillo) 1

Sarcophilus_harrisii_76_7.0 (Tasmanian devil) 1

Anolis_carolinensis_76_2.0 (Green anole) 1

Xenopus_laevis_ (African clawed frog) 5

Tetraodon_nigroviridis_76_8 (Spotted green pufferfish) 1

Octopus_bimaculoides_280 1

Lottia_gigantea_ (Owl limpet) 1

Danaus_plexippus_OGS1.0 (Monarch butterfly) 0

Nasonia_vitripennis_ (Jewel wasp) 0

Solenopsis_invicta_v.2.2.3 (Red fire ant) 0

Acromyrmex_echinatior_v3.8 (Panamanian leafcutter ant) 0

Atta_cephalotes_v1.1 0

Camponotus_floridanus_v3.3 (Florida carpenter ant) 0

Lucilia_cuprina (Australian sheep blowfly) 0

Drosophila_grimshawi_1.3 0

Drosophila_willistoni_1.3 0

Drosophila_pseudoobscura_2.13 0

Drosophila_persimilis_1.3 0

Drosophila_suzukii 0

Drosophila_yakuba_1.3 0

Drosophila_simulans_1.3 0

Drosophila_sechellia_1.3 0

Drosophila_melanogaster_76_5 (Fruit fly) 0

Drosophila_erecta_1.3 0

Drosophila_ananassae_1.3 0

Drosophila_virilis_1.2 0

Drosophila_mojavensis_1.3 0

Aedes_aegypti_55_(Not_maintained) (Yellow fever mosquito) 0

Anopheles_darlingi_22 (American malaria mosquito) 0

Anopheles_gambiae_49_3j (African malaria mosquito) 0

Pediculus_humanus_corporis__(Early_assembly) (Human body louse) 0

Strigamia_maritima_22 1

Hydra_vulgaris 1

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Strains
Genome Number

Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2) (Tropical clawed frog) 2

Drosophila_melanogaster_FlyBase_5.12_(FlyBase) (Fruit fly) 0

Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase) (African malaria mosquito) 0

Longest transcript per gene
Genome Number

Homo_sapiens_69_37 (Human) 1

Pan_troglodytes_69_2.1.4 (Chimpanzee) 1

Gorilla_gorilla_69_3.1 (Western gorilla) 1

Pongo_abelii_69_2 (Sumatran orangutan) 1

Nomascus_leucogenys_69_1.0 (Northern white-cheeked gibbon) 1

Macaca_mulatta_69_1 (Rhesus monkey) 1

Otolemur_garnettii_69_3 (Small-eared galago) 1

Rattus_norvegicus_69_3.4 (Norway rat) 1

Mus_musculus_69_38 (House mouse) 1

Dipodomys_ordii_69_1 (Ord's kangaroo rat) 1

Ictidomys_tridecemlineatus_69_2 (Thirteen-lined ground squirrel) 1

Cavia_porcellus_69_3 (Domestic guinea pig) 1

Oryctolagus_cuniculus_69_2 (Rabbit) 1

Ochotona_princeps_69 (American pika) 1

Sus_scrofa_69_10.2 (Pig) 1

Bos_taurus_69_3.1 (Cattle) 1

Mustela_putorius_furo_69_1.0 (Domestic ferret) 1

Ailuropoda_melanoleuca_69_1 (Giant panda) 1

Canis_familiaris_69_3.1 (Dog) 1

Equus_caballus_69_2 (Horse) 1

Myotis_lucifugus_69_2.0 (Little brown bat) 1

Erinaceus_europaeus_69 (Western European hedgehog) 1

Loxodonta_africana_69_3 (African savanna elephant) 1

Sarcophilus_harrisii_69_7.0 (Tasmanian devil) 1

Anolis_carolinensis_69_2.0 (Green anole) 1

Tetraodon_nigroviridis_69_8 (Spotted green pufferfish) 1

Drosophila_melanogaster_69_5 (Fruit fly) 0

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Others
Genome Number

Homo_sapiens_75_37_(old_version_GRC) (Human) 1

Homo_sapiens__(NCBI_version) (Human) 1

Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate) (House mouse) 1

TargetDB__(Targets) 2

STRING_v9.0.5_(STRING) 13

Uniprot_2018_03_genome 2862

NCBI_2017_08_genome 229

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