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Domain combinations for _gap_,47668,47473,55550,57850,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

47668 - N-terminal domain of cbl (N-cbl)
47473 - EF-hand
55550 - SH2 domain
57850 - RING/U-box

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   0
Pan_troglodytes_76_2.1.4   (Chimpanzee)   0
Gorilla_gorilla_76_3.1   (Western gorilla)   0
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   0
Papio_anubis_76   (Olive baboon)   1
Macaca_mulatta_76_1   (Rhesus monkey)   0
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   0
Mustela_putorius_furo_76_1.0   (Domestic ferret)   0
Felis_catus_76_6.2   (Domestic cat)   0
Pteropus_vampyrus_76_1   (Large flying fox)   0
Loxodonta_africana_76_3   (African savanna elephant)   0
Gallus_gallus_76_4   (Chicken)   0
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   0
Xenopus_laevis_   (African clawed frog)   6
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   1
Takifugu_rubripes_76_4   (Torafugu)   2
Oreochromis_niloticus_76_1.0   (Nile tilapia)   2
Adineta_vaga 1
Sarcoptes_scabiei 1
Pristionchus_pacificus_ 1
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   1
Caenorhabditis_remanei_ 1
Caenorhabditis_elegans_76_235   (Roundworm)   1
Taenia_solium_   (Pork tapeworm)   1

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   0
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   1

Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   0
Pan_troglodytes_69_2.1.4   (Chimpanzee)   0
Gorilla_gorilla_69_3.1   (Western gorilla)   0
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   0
Macaca_mulatta_69_1   (Rhesus monkey)   0
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   0
Mustela_putorius_furo_69_1.0   (Domestic ferret)   0
Pteropus_vampyrus_69_1   (Large flying fox)   0
Gallus_gallus_69_2   (Chicken)   0
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   0
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   1
Takifugu_rubripes_69_4   (Torafugu)   1
Oreochromis_niloticus_69_1.0   (Nile tilapia)   1
Caenorhabditis_elegans_69_215   (Roundworm)   1

Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   1
Homo_sapiens__(NCBI_version)   (Human)   0
STRING_v9.0.5_(STRING) 4
Uniprot_2018_03_genome 1440
NCBI_2017_08_genome 67
TargetDB__(Targets) 2

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