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Home > SCOP hierarchy > Domain combination - _gap_,47668,47473,55550,57850,_gap_,46934

Domain combinations for _gap_,47668,47473,55550,57850,_gap_,46934 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

Phylogenetic distribution

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Homo_sapiens_76_38 (Human) 1

Pan_troglodytes_76_2.1.4 (Chimpanzee) 1

Gorilla_gorilla_76_3.1 (Western gorilla) 1

Nomascus_leucogenys_76_1.0 (Northern white-cheeked gibbon) 1

Papio_anubis_76 (Olive baboon) 1

Macaca_mulatta_76_1 (Rhesus monkey) 1

Callithrix_jacchus_76_3.2.1 (White-tufted-ear marmoset) 1

Mustela_putorius_furo_76_1.0 (Domestic ferret) 1

Felis_catus_76_6.2 (Domestic cat) 2

Pteropus_vampyrus_76_1 (Large flying fox) 1

Loxodonta_africana_76_3 (African savanna elephant) 1

Gallus_gallus_76_4 (Chicken) 1

Pelodiscus_sinensis_76_1.0 (Chinese soft-shelled turtle) 2

Xenopus_tropicalis_76_4.2 (Tropical clawed frog) 1

Strains
Genome Number

Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2) (Tropical clawed frog) 5

Longest transcript per gene
Genome Number

Homo_sapiens_69_37 (Human) 1

Pan_troglodytes_69_2.1.4 (Chimpanzee) 1

Gorilla_gorilla_69_3.1 (Western gorilla) 1

Nomascus_leucogenys_69_1.0 (Northern white-cheeked gibbon) 1

Macaca_mulatta_69_1 (Rhesus monkey) 1

Callithrix_jacchus_69_3.2.1 (White-tufted-ear marmoset) 1

Mustela_putorius_furo_69_1.0 (Domestic ferret) 1

Pteropus_vampyrus_69_1 (Large flying fox) 1

Gallus_gallus_69_2 (Chicken) 1

Pelodiscus_sinensis_69_1.0 (Chinese soft-shelled turtle) 1

Xenopus_tropicalis_69_4.2 (Tropical clawed frog) 1

Others
Genome Number

Homo_sapiens_75_37_(old_version_GRC) (Human) 1

Homo_sapiens__(NCBI_version) (Human) 1

NCBI_2017_08_genome 60

STRING_v9.0.5_(STRING) 5

Uniprot_2018_03_genome 1134

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