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Domain combinations for _gap_,47923,47923,47923 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

47923 - Ypt/Rab-GAP domain of gyp1p
47923 - Ypt/Rab-GAP domain of gyp1p
47923 - Ypt/Rab-GAP domain of gyp1p

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   0
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   1
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   0
Tupaia_belangeri_76   (Northern tree shrew)   1
Vicugna_pacos_76_1   (Alpaca)   1
Tursiops_truncatus_76_1   (Bottlenose dolphin)   0
Canis_familiaris_76_3.1   (Dog)   1
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_76_1.0   (Tammar wallaby)   0
Anas_platyrhynchos_76_1.0   (Mallard)   0
Latimeria_chalumnae_76_1   (Coelacanth)   1
Lepisosteus_oculatus_76   (Spotted gar)   1
Takifugu_rubripes_76_4   (Torafugu)   0
Oryzias_latipes_76_1   (Japanese medaka)   1
Poecilia_formosa_76   (Amazon molly)   1
Astyanax_mexicanus_76   (Mexican tetra)   1
Danio_rerio_76_9   (Zebrafish)   1
Crassostrea_gigas_22   (Pacific oyster)   1
Drosophila_suzukii 0
Capsaspora_owczarzaki_ATCC_30864_ 1
Conidiobolus_coronatus_NRRL28638_v1.0 0
Phycomyces_blakesleeanus_ 0
Rhizomucor_miehei_CAU432_ 0
Ustilago_maydis_ 0
Microbotryum_violaceum_22 1
Apiospora_montagnei_NRRL_25634_v1.0 1
Thielavia_terrestris_NRRL_8126_ 1
Neurospora_tetrasperma_ 1
Neurospora_discreta_FGSC_8579_ 1
Neurospora_crassa_OR74A_ 1
Cryphonectria_parasitica_   (Chestnut blight fungus)   1
Fusarium_graminearum_ 1
Nectria_haematococca_mpVI_ 1
Fusarium_oxysporum_f._sp._lycopersici_4286_ 1
Trichoderma_asperellum_CBS_433.97_v1.0 1
Trichoderma_atroviride_ 1
Trichoderma_citrinoviride_v1.0 1
Trichoderma_reesei_1.2 1
Trichoderma_virens_Gv29-8_ 1
Trichoderma_longibrachiatum_ATCC_18648_v1.0 1
Trichoderma_harzianum_CBS_226.95_v1.0 1
Amorphotheca_resinae_v1.0   (Creosote fungus)   1
Botrytis_cinerea_B05.10_ 1
Sclerotinia_sclerotiorum_ 1
Blumeria_graminis_22 1
Aspergillus_carbonarius_ITEM_5010_ 1
Thellungiella_halophila_v173 0
Actinidia_chinensis_Hongyang_ 0
Ectocarpus_siliculosus 1
Pythium_arrhenomanes_ATCC_12531_22 1
Toxoplasma_gondii_VEG 0
Toxoplasma_gondii_ME49 0
Toxoplasma_gondii_GT1 0

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Longest transcript per gene
Genome     Number
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   0
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   1
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   0
Tupaia_belangeri_69   (Northern tree shrew)   1
Vicugna_pacos_69_1   (Alpaca)   1
Tursiops_truncatus_69_1   (Bottlenose dolphin)   0
Canis_familiaris_69_3.1   (Dog)   1
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   0
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_69_1.0   (Tammar wallaby)   0
Latimeria_chalumnae_69_1   (Coelacanth)   1
Oryzias_latipes_69_1   (Japanese medaka)   1
Danio_rerio_69_9   (Zebrafish)   1

Others
Genome     Number
Nicotiana_benthamiana_0.4.4_(Early_draft) 0
STRING_v9.0.5_(STRING) 7
NCBI_2017_08_genome 75
Uniprot_2018_03_genome 1218
Protozoadb_2010_08_(Protozoadb) 2

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