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Home > SCOP hierarchy > Domain combination - _gap_,48065,50729,57903,50729,_gap_

Domain combinations for _gap_,48065,50729,57903,50729,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

48065 - DBL homology domain (DH-domain)
50729 - PH domain-like
57903 - FYVE/PHD zinc finger
50729 - PH domain-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Pan_troglodytes_76_2.1.4 (Chimpanzee) 1

Macaca_mulatta_76_1 (Rhesus monkey) 1

Rattus_norvegicus_76_5.0 (Norway rat) 1

Mus_musculus_76_38 (House mouse) 1

Dipodomys_ordii_76_1 (Ord's kangaroo rat) 1

Oryctolagus_cuniculus_76_2 (Rabbit) 1

Felis_catus_76_6.2 (Domestic cat) 1

Sorex_araneus_76_1 (European shrew) 1

Loxodonta_africana_76_3 (African savanna elephant) 1

Echinops_telfairi_76 (Small Madagascar hedgehog) 1

Sarcophilus_harrisii_76_7.0 (Tasmanian devil) 1

Danio_rerio_76_9 (Zebrafish) 1

Crassostrea_gigas_22 (Pacific oyster) 1

Linepithema_humile_v1.1 (Argentine ant) 1

Daphnia_pulex_ (Common water flea) 1

Pristionchus_pacificus_ 1

Meloidogyne_incognita_ (Southern root-knot nematode) 1

Hydra_vulgaris 1

Albugo_laibachii_22 0

Pythium_iwayamai_DAOM_BR242034_22 0

Pythium_arrhenomanes_ATCC_12531_22 0

Pythium_ultimum_v1.7-2 0

Pythium_aphanidermatum_DAOM_BR444_22 0

Pythium_irregulare_DAOM_BR486_22 0

Pythium_vexans_DAOM_BR484_22 0

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Longest transcript per gene
Genome Number

Pan_troglodytes_69_2.1.4 (Chimpanzee) 1

Macaca_mulatta_69_1 (Rhesus monkey) 1

Rattus_norvegicus_69_3.4 (Norway rat) 1

Mus_musculus_69_38 (House mouse) 1

Dipodomys_ordii_69_1 (Ord's kangaroo rat) 1

Sorex_araneus_69_1 (European shrew) 1

Loxodonta_africana_69_3 (African savanna elephant) 1

Echinops_telfairi_69 (Small Madagascar hedgehog) 1

Sarcophilus_harrisii_69_7.0 (Tasmanian devil) 1

Danio_rerio_69_9 (Zebrafish) 1

Others
Genome Number

Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate) (House mouse) 1

STRING_v9.0.5_(STRING) 4

Uniprot_2018_03_genome 1995

NCBI_2017_08_genome 182

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