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Domain combinations for _gap_,48065,50729,_gap_,50044,55550,50044 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

48065 - DBL homology domain (DH-domain)
50729 - PH domain-like
50044 - SH3-domain
55550 - SH2 domain
50044 - SH3-domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Otolemur_garnettii_76_3   (Small-eared galago)   1
Cavia_porcellus_76_3   (Domestic guinea pig)   1
Ailuropoda_melanoleuca_76_1   (Giant panda)   1
Felis_catus_76_6.2   (Domestic cat)   1
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   2
Lepisosteus_oculatus_76   (Spotted gar)   1
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   2
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   1

Longest transcript per gene
Genome     Number
Otolemur_garnettii_69_3   (Small-eared galago)   1
Rattus_norvegicus_69_3.4   (Norway rat)   1
Cavia_porcellus_69_3   (Domestic guinea pig)   1
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   2
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   1
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   1

Others
Genome     Number
STRING_v9.0.5_(STRING) 4
NCBI_2017_08_genome 20
Uniprot_2018_03_genome 650

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