SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,48208,_gap_,49384 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

48208 - Six-hairpin glycosidases
49384 - Carbohydrate-binding domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Jonesia_denitrificans_DSM_20603 1
Cellulomonas_flavigena_DSM_20109 1
Clostridium_thermocellum_ATCC_27405 1
Ruminococcus_albus_7 0
Clostridium_lentocellum_DSM_5427 1
Hahella_chejuensis_KCTC_2396 1

Strains
Genome     Number
Clostridium_thermocellum_DSM_1313 1
Ruminococcus_champanellensis_18P13 0

Others
Genome     Number
STRING_v9.0.5_(STRING) 3
Uniprot_2018_03_genome 279
NCBI_2017_08_genome 52

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