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Home > SCOP hierarchy > Domain combination - _gap_,48366

Domain combinations for _gap_,48366 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Homo_sapiens_76_38 (Human) 3

Pan_troglodytes_76_2.1.4 (Chimpanzee) 2

Gorilla_gorilla_76_3.1 (Western gorilla) 3

Pongo_abelii_76_2 (Sumatran orangutan) 2

Nomascus_leucogenys_76_1.0 (Northern white-cheeked gibbon) 2

Papio_anubis_76 (Olive baboon) 11

Macaca_mulatta_76_1 (Rhesus monkey) 4

Callithrix_jacchus_76_3.2.1 (White-tufted-ear marmoset) 6

Otolemur_garnettii_76_3 (Small-eared galago) 1

Microcebus_murinus_76_1 (Gray mouse lemur) 1

Rattus_norvegicus_76_5.0 (Norway rat) 4

Mus_musculus_76_38 (House mouse) 6

Dipodomys_ordii_76_1 (Ord's kangaroo rat) 3

Ictidomys_tridecemlineatus_76_2 (Thirteen-lined ground squirrel) 1

Heterocephalus_glaber_v1.7-2 (Naked mole-rat) 3

Cavia_porcellus_76_3 (Domestic guinea pig) 3

Oryctolagus_cuniculus_76_2 (Rabbit) 2

Ochotona_princeps_76 (American pika) 3

Tupaia_belangeri_76 (Northern tree shrew) 1

Sus_scrofa_76_10.2 (Pig) 1

Bos_taurus_76_3.1 (Cattle) 1

Ovis_aries_76_3.1 (Sheep) 0

Vicugna_pacos_76_1 (Alpaca) 1

Tursiops_truncatus_76_1 (Bottlenose dolphin) 2

Mustela_putorius_furo_76_1.0 (Domestic ferret) 2

Ailuropoda_melanoleuca_76_1 (Giant panda) 2

Canis_familiaris_76_3.1 (Dog) 2

Felis_catus_76_6.2 (Domestic cat) 4

Equus_caballus_76_2 (Horse) 4

Myotis_lucifugus_76_2.0 (Little brown bat) 3

Pteropus_vampyrus_76_1 (Large flying fox) 2

Sorex_araneus_76_1 (European shrew) 0

Erinaceus_europaeus_76 (Western European hedgehog) 0

Procavia_capensis_76_1 (Cape rock hyrax) 2

Loxodonta_africana_76_3 (African savanna elephant) 2

Echinops_telfairi_76 (Small Madagascar hedgehog) 2

Dasypus_novemcinctus_76_2 (Nine-banded armadillo) 10

Choloepus_hoffmanni_76_1 (Hoffmann's two-fingered sloth) 3

Macropus_eugenii_76_1.0 (Tammar wallaby) 2

Sarcophilus_harrisii_76_7.0 (Tasmanian devil) 4

Monodelphis_domestica_76_5 (Gray short-tailed opossum) 1

Ornithorhynchus_anatinus_76_5 (Platypus) 1

Saccoglossus_kowalevskii_v3.0 1

Petromyzon_marinus_76_7.0 (Sea lamprey) 3

Meleagris_gallopavo_76_2 (Turkey) 1

Gallus_gallus_76_4 (Chicken) 1

Anas_platyrhynchos_76_1.0 (Mallard) 1

Taeniopygia_guttata_76_3.2.4 (Zebra finch) 2

Ficedula_albicollis_76_1.0 (Collared flycatcher) 1

Pelodiscus_sinensis_76_1.0 (Chinese soft-shelled turtle) 2

Anolis_carolinensis_76_2.0 (Green anole) 1

Xenopus_laevis_ (African clawed frog) 2

Xenopus_tropicalis_76_4.2 (Tropical clawed frog) 3

Latimeria_chalumnae_76_1 (Coelacanth) 1

Lepisosteus_oculatus_76 (Spotted gar) 2

Gadus_morhua_76_1 (Atlantic cod) 3

Tetraodon_nigroviridis_76_8 (Spotted green pufferfish) 1

Takifugu_rubripes_76_4 (Torafugu) 7

Gasterosteus_aculeatus_76_1 (Three-spined stickleback) 2

Oryzias_latipes_76_1 (Japanese medaka) 4

Xiphophorus_maculatus_76_4.4.2 (Southern platyfish) 1

Poecilia_formosa_76 (Amazon molly) 2

Oreochromis_niloticus_76_1.0 (Nile tilapia) 4

Astyanax_mexicanus_76 (Mexican tetra) 3

Danio_rerio_76_9 (Zebrafish) 4

Oikopleura_dioica 1

Ciona_savignyi_76_2.0 (Pacific transparent sea squirt) 1

Strongylocentrotus_purpuratus_v3.1 (Purple sea urchin) 3

Adineta_vaga 3

Octopus_bimaculoides_280 1

Crassostrea_gigas_22 (Pacific oyster) 3

Lottia_gigantea_ (Owl limpet) 2

Helobdella_robusta_ 0

Capitella_sp._I_ 1

Danaus_plexippus_OGS1.0 (Monarch butterfly) 1

Heliconius_melpomene_ (Postman butterfly) 1

Nasonia_vitripennis_ (Jewel wasp) 1

Apis_mellifera_38.2d_(Not_maintained) (Honey bee) 3

Harpegnathos_saltator_v3.3 (Jerdon's jumping ant) 1

Linepithema_humile_v1.1 (Argentine ant) 1

Pogonomyrmex_barbatus_v1.2 (Red harvester ant) 2

Solenopsis_invicta_v.2.2.3 (Red fire ant) 2

Acromyrmex_echinatior_v3.8 (Panamanian leafcutter ant) 2

Atta_cephalotes_v1.1 2

Camponotus_floridanus_v3.3 (Florida carpenter ant) 2

Lucilia_cuprina (Australian sheep blowfly) 3

Drosophila_grimshawi_1.3 4

Drosophila_willistoni_1.3 4

Drosophila_pseudoobscura_2.13 4

Drosophila_persimilis_1.3 4

Drosophila_suzukii 2

Drosophila_yakuba_1.3 4

Drosophila_simulans_1.3 3

Drosophila_sechellia_1.3 4

Drosophila_melanogaster_76_5 (Fruit fly) 9

Drosophila_erecta_1.3 4

Drosophila_ananassae_1.3 4

Drosophila_virilis_1.2 4

Drosophila_mojavensis_1.3 4

Megaselia_scalaris_22 1

Aedes_aegypti_55_(Not_maintained) (Yellow fever mosquito) 2

Culex_pipiens_quinquefasciatus_ (Southern house mosquito) 2

Anopheles_darlingi_22 (American malaria mosquito) 1

Anopheles_gambiae_49_3j (African malaria mosquito) 2

Tribolium_castaneum_3.0 (Red flour beetle) 3

Pediculus_humanus_corporis__(Early_assembly) (Human body louse) 2

Acyrthosiphon_pisum_ (Pea aphid) 1

Rhodnius_prolixus_22 1

Daphnia_pulex_ (Common water flea) 1

Strigamia_maritima_22 2

Sarcoptes_scabiei 1

Tetranychus_urticae_ (Two-spotted spider mite) 2

Ixodes_scapularis__(Preliminary) (Black-legged tick) 1

Pristionchus_pacificus_ 0

Meloidogyne_incognita_ (Southern root-knot nematode) 1

Meloidogyne_hapla_ 1

Onchocerca_volvulus_22 1

Brugia_malayi_WS250 (Agent of lymphatic filariasis) 1

Caenorhabditis_japonica_ 1

Caenorhabditis_brenneri_ 1

Caenorhabditis_remanei_ 1

Caenorhabditis_elegans_76_235 (Roundworm) 2

Caenorhabditis_briggsae_2 1

Trichinella_spiralis_22 2

Hymenolepis_microstoma_ 0

Echinococcus_multilocularis_ 1

Echinococcus_granulosus_ 1

Taenia_solium_ (Pork tapeworm) 1

Schistosoma_mansoni_ 1

Mnemiopsis_leidyi (Sea walnut) 4

Acropora_digitifera_v1.0 1

Nematostella_vectensis_1.0 (Starlet sea anemone) 1

Hydra_vulgaris 1

Amphimedon_queenslandica 4

Trichoplax_adhaerens_ 2

Proterospongia_sp._ATCC_50818_ 2

Monosiga_brevicollis_ 1

Sphaeroforma_arctica_JP610_ 4

Capsaspora_owczarzaki_ATCC_30864_ 8

Conidiobolus_coronatus_NRRL28638_v1.0 2

Mortierella_verticillata_NRRL_6337_ 2

Phycomyces_blakesleeanus_ 2

Rhizopus_oryzae_RA_99-880_ 6

Mucor_circinelloides_ 3

Rhizomucor_miehei_CAU432_ 4

Malassezia_globosa_CBS_7966_ 2

Sporisorium_reilianum_22 1

Ustilago_maydis_ 1

Mixia_osmundae_IAM_14324_v1.0 1

Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 1

Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 1

Melampsora_laricis-populina_ 1

Rhodotorula_graminis_WP1_v1.0 1

Sporobolomyces_roseus_IAM_13481_ 0

Microbotryum_violaceum_22 2

Wallemia_sebi_v1.0 1

Sphaerobolus_stellatus_v1.0 3

Piloderma_croceum_F_1598_v1.0 2

Serpula_lacrymans_var._lacrymans_S7.9_ 2

Coniophora_puteana 3

Hydnomerulius_pinastri_v2.0 3

Paxillus_rubicundulus_Ve08.2h10_v1.0 3

Pisolithus_microcarpus_441_v1.0 3

Pisolithus_tinctorius_Marx_270_v1.0 3

Scleroderma_citrinum_Foug_A_v1.0 3

Coprinopsis_cinerea_okayama7_130_v3 3

Pleurotus_ostreatus_ (Oyster mushroom) 3

Amanita_thiersii_Skay4041_v1.0 2

Amanita_muscaria_Koide_v1.0 (Fly agaric) 2

Galerina_marginata_v1.0 3

Hebeloma_cylindrosporum_h7_v2.0 2

Laccaria_bicolor_S238N-H82_ 2

Agaricus_bisporus_var._bisporus_ 1

Schizophyllum_commune_ 2

Stereum_hirsutum_FP-91666_SS1__v1.0 3

Heterobasidion_annosum_ 2

Gloeophyllum_trabeumv1.0 2

Punctularia_strigosozonata_v1.0 2

Sebacina_vermifera_MAFF_305830_v1.0 1

Fomitiporia_mediterranea_v1.0 2

Tulasnella_calospora_AL13/4D_v1.0 0

Postia_placenta_ 2

Wolfiporia_cocos_MD-104_SS10__v1.0 2

Fomitopsis_pinicolav1.0 2

Fomitopsis_pinicola_FP-58527_SS1_v3.0 2

Phanerochaete_chrysosporium_RP-78_2.1 2

Dichomitus_squalens 1

Trametes_versicolor_v1.0 1

Tremella_mesenterica_ (Witches' butter) 0

Daldinia_eschscholzii_EC12_v1.0 0

Apiospora_montagnei_NRRL_25634_v1.0 1

Magnaporthe_poae_ATCC_64411_22 1

Magnaporthe_grisea_70-15_ 1

Podospora_anserina_ 1

Sporotrichum_thermophile_ATCC_42464_ 1

Thielavia_terrestris_NRRL_8126_ 1

Chaetomium_globosum_CBS_148.51_ 1

Neurospora_tetrasperma_ 1

Neurospora_discreta_FGSC_8579_ 1

Neurospora_crassa_OR74A_ 1

Cryphonectria_parasitica_ (Chestnut blight fungus) 1

Verticillium_albo-atrum_VaMs.102_ 1

Verticillium_dahliae_VdLs.17_ 2

Acremonium_alcalophilumv_1.0 1

Glomerella_graminicola_22 1

Fusarium_graminearum_ 1

Nectria_haematococca_mpVI_ 1

Fusarium_oxysporum_f._sp._lycopersici_4286_ 1

Fusarium_verticillioides_7600_ 2

Trichoderma_asperellum_CBS_433.97_v1.0 1

Trichoderma_atroviride_ 1

Trichoderma_citrinoviride_v1.0 1

Trichoderma_reesei_1.2 1

Trichoderma_virens_Gv29-8_ 1

Trichoderma_longibrachiatum_ATCC_18648_v1.0 1

Trichoderma_harzianum_CBS_226.95_v1.0 1

Amorphotheca_resinae_v1.0 (Creosote fungus) 1

Botrytis_cinerea_B05.10_ 0

Sclerotinia_sclerotiorum_ 1

Blumeria_graminis_22 1

Didymella_exigua_CBS_183.55_v1.0 1

Leptosphaeria_maculans_22 1

Setosphaeria_turcica_v1.0 2

Cochliobolus_miyabeanus_ATCC_44560_v1.0 1

Cochliobolus_victoriae_FI3_v1.0 1

Cochliobolus_carbonum_26-R-13_v1.0 1

Cochliobolus_heterostrophus_ (Southern corn leaf blight pathogen) 1

Alternaria_brassicicola_ 1

Cochliobolus_lunatus_m118_v2.0 1

Pyrenophora_teres_f._teres_22 1

Pyrenophora_tritici-repentis_ 1

Stagonospora_nodorum_ 1

Mycosphaerella_graminicola_IPO323_ 0

Zasmidium_cellare_ATCC_36951_v1.0 1

Dothistroma_septosporum 1

Septoria_musiva_v1.0 1

Mycosphaerella_fijiensis_CIRAD86_ 1

Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 1

Paracoccidioides_brasiliensis_Pb18_ 1

Coccidioides_posadasii_RMSCC_3488_ 2

Coccidioides_immitis_RS_ 2

Ajellomyces_dermatitidis_SLH14081_ 1

Histoplasma_capsulatum_class_NAmI_strain_WU24_ 1

Microsporum_canis_CBS_113480_ 1

Trichophyton_equinum_CBS_127.97_ 2

Trichophyton_verrucosum_HKI_0517_ 2

Arthroderma_benhamiae_CBS_112371_ 1

Trichophyton_tonsurans_CBS_112818_ 1

Trichophyton_rubrum_CBS_118892_ 3

Uncinocarpus_reesii_1704_ 2

Aspergillus_zonatus_v1.0 2

Penicillium_chrysogenum_Wisconsin_54-1255_ 3

Penicillium_chrysogenum_v1.0 1

Aspergillus_acidus_v1.0 1

Aspergillus_fumigatus_Af293 1

Aspergillus_brasiliensis_v1.0 1

Aspergillus_nidulans_FGSC_A4_ 1

Aspergillus_sydowii_v1.0 2

Aspergillus_versicolor_v1.0 1

Aspergillus_glaucus 2

Aspergillus_carbonarius_ITEM_5010_ 2

Neosartorya_fischeri_NRRL_181_ 2

Aspergillus_terreus_NIH2624_ 2

Aspergillus_tubingensis_v1.0 1

Aspergillus_wentii_v1.0 2

Aspergillus_oryzae_RIB40_ 2

Aspergillus_niger_22 1

Aspergillus_niger_ATCC_1015_ 1

Aspergillus_flavus_NRRL3357_ 3

Aspergillus_clavatus_NRRL_1_ 2

Penicillium_marneffei_ATCC_18224_ 3

Tuber_melanosporum_Mel28_22 1

Tuber_melanosporum_Vittad_ (Perigord truffle) 1

Hansenula_polymorpha_v2.0 2

Dekkera_bruxellensis_CBS_2499_v2.0 0

Pichia_membranifaciensv1.0 1

Candida_tanzawaensis_NRRL_Y-17324__v1.0 1

Candida_dubliniensis_CD36_ 1

Candida_tropicalis_MYA-3404_ 1

Candida_parapsilosis_ 1

Candida_albicans_SC5314 1

Lodderomyces_elongisporus_NRRL_YB-4239_ 2

Babjeviella_inositovora_NRRL_Y-12698_v1.0 1

Pichia_stipitis_CBS_6054_ 1

Candida_guilliermondii_ATCC_6260_ 1

Hyphopichia_burtonii_NRRL_Y-1933_v1.0 1

Debaromyces_hansenii 1

Wickerhamomyces_anomalus 0

Pichia_pastoris_GS115_ 1

Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 3

Yarrowia_lipolytica_CLIB122 1

Candida_lusitaniae_ATCC_42720_ 2

Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 1

Vanderwaltozyma_polyspora_DSM_70294_ 1

Candida_glabrata_CBS138 1

Kluyveromyces_thermotolerans_CBS_6340 1

Lachancea_kluyveri_ 1

Kluyveromyces_waltii 1

Ashbya_gossypii_ATCC_10895_ 1

Zygosaccharomyces_rouxii_ 1

Saccharomyces_mikatae_MIT 3

Saccharomyces_paradoxus_MIT 2

Saccharomyces_cerevisiae_76 (Baker's yeast) 2

Saccharomyces_bayanus_MIT 2

Kluyveromyces_lactis 1

Schizosaccharomyces_cryophilus_OY26_22 1

Schizosaccharomyces_octosporus_yFS286_ 1

Schizosaccharomyces_japonicus_yFS275_ 1

Schizosaccharomyces_pombe (Fission yeast) 1

Catenaria_anguillulae_PL171_v1.0 1

Allomyces_macrogynus_ATCC_38327_ 7

Spizellomyces_punctatus_DAOM_BR117_ 7

Dictyostelium_discoideum 11

Dictyostelium_purpureum_ 11

Entamoeba_dispar_1.2 25

Entamoeba_invadens_1.2 35

Entamoeba_histolytica_1 28

Thecamonas_trahens_ATCC_50062_ 30

Bigelowiella_natans_CCMP2755_22 2

Trypanosoma_cruzi_strain_CL_Brener 4

Albugo_laibachii_22 1

Pythium_iwayamai_DAOM_BR242034_22 1

Pythium_arrhenomanes_ATCC_12531_22 1

Pythium_ultimum_v1.7-2 1

Pythium_aphanidermatum_DAOM_BR444_22 0

Pythium_irregulare_DAOM_BR486_22 1

Pythium_vexans_DAOM_BR484_22 1

Phytophthora_ramorum_1.1 (Sudden oak death agent) 1

Phytophthora_sojae_1.1 1

Phytophthora_infestans_T30-4_ 1

Phytophthora_capsici_ 1

Hyaloperonospora_arabidopsidis_22 1

Tetrahymena_thermophila_SB210_1_ 2

Ichthyophthirius_multifiliis_strain_G5_ 1

Naegleria_gruberi_ 18

Trichomonas_vaginalis_ 16

Guillardia_theta_CCMP2712_v1.0_ 1

Emiliania_huxleyi_CCMP1516_ 1

Waddlia_chondrophila_WSU_86-1044 3

Candidatus_Protochlamydia_amoebophila_UWE25 0

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Longest transcript per gene
Genome Number

Homo_sapiens_69_37 (Human) 1

Pan_troglodytes_69_2.1.4 (Chimpanzee) 2

Gorilla_gorilla_69_3.1 (Western gorilla) 2

Pongo_abelii_69_2 (Sumatran orangutan) 2

Nomascus_leucogenys_69_1.0 (Northern white-cheeked gibbon) 2

Macaca_mulatta_69_1 (Rhesus monkey) 2

Callithrix_jacchus_69_3.2.1 (White-tufted-ear marmoset) 2

Otolemur_garnettii_69_3 (Small-eared galago) 1

Microcebus_murinus_69_1 (Gray mouse lemur) 1

Rattus_norvegicus_69_3.4 (Norway rat) 1

Mus_musculus_69_38 (House mouse) 1

Dipodomys_ordii_69_1 (Ord's kangaroo rat) 3

Ictidomys_tridecemlineatus_69_2 (Thirteen-lined ground squirrel) 1

Cavia_porcellus_69_3 (Domestic guinea pig) 1

Oryctolagus_cuniculus_69_2 (Rabbit) 2

Ochotona_princeps_69 (American pika) 3

Tupaia_belangeri_69 (Northern tree shrew) 1

Sus_scrofa_69_10.2 (Pig) 1

Bos_taurus_69_3.1 (Cattle) 1

Vicugna_pacos_69_1 (Alpaca) 1

Tursiops_truncatus_69_1 (Bottlenose dolphin) 2

Mustela_putorius_furo_69_1.0 (Domestic ferret) 2

Ailuropoda_melanoleuca_69_1 (Giant panda) 2

Canis_familiaris_69_3.1 (Dog) 1

Felis_catus_69 (Domestic cat) 2

Equus_caballus_69_2 (Horse) 1

Myotis_lucifugus_69_2.0 (Little brown bat) 3

Pteropus_vampyrus_69_1 (Large flying fox) 2

Sorex_araneus_69_1 (European shrew) 0

Erinaceus_europaeus_69 (Western European hedgehog) 0

Procavia_capensis_69_1 (Cape rock hyrax) 2

Loxodonta_africana_69_3 (African savanna elephant) 1

Echinops_telfairi_69 (Small Madagascar hedgehog) 2

Dasypus_novemcinctus_69_2 (Nine-banded armadillo) 8

Choloepus_hoffmanni_69_1 (Hoffmann's two-fingered sloth) 3

Macropus_eugenii_69_1.0 (Tammar wallaby) 2

Sarcophilus_harrisii_69_7.0 (Tasmanian devil) 2

Monodelphis_domestica_69_5 (Gray short-tailed opossum) 1

Ornithorhynchus_anatinus_69_5 (Platypus) 1

Petromyzon_marinus_69_7.0 (Sea lamprey) 3

Meleagris_gallopavo_69_2 (Turkey) 1

Gallus_gallus_69_2 (Chicken) 1

Taeniopygia_guttata_69_3.2.4 (Zebra finch) 2

Pelodiscus_sinensis_69_1.0 (Chinese soft-shelled turtle) 2

Anolis_carolinensis_69_2.0 (Green anole) 1

Xenopus_tropicalis_69_4.2 (Tropical clawed frog) 1

Latimeria_chalumnae_69_1 (Coelacanth) 1

Gadus_morhua_69_1 (Atlantic cod) 3

Tetraodon_nigroviridis_69_8 (Spotted green pufferfish) 1

Takifugu_rubripes_69_4 (Torafugu) 2

Gasterosteus_aculeatus_69_1 (Three-spined stickleback) 2

Oryzias_latipes_69_1 (Japanese medaka) 3

Xiphophorus_maculatus_69_4.4.2 (Southern platyfish) 1

Oreochromis_niloticus_69_1.0 (Nile tilapia) 3

Danio_rerio_69_9 (Zebrafish) 3

Drosophila_melanogaster_69_5 (Fruit fly) 3

Caenorhabditis_elegans_69_215 (Roundworm) 1

Saccharomyces_cerevisiae_69_4 (Baker's yeast) 2

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Others
Genome Number

Homo_sapiens_75_37_(old_version_GRC) (Human) 3

Homo_sapiens__(NCBI_version) (Human) 2

Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate) (House mouse) 1

Loa_loa_v3.3_(Request) (Eye worm) 2

Wuchereria_bancrofti_v1.0_(Request) (Agent of lymphatic filariasis) 1

Brugia_malayi_v1.0_(Duplicate) (Agent of lymphatic filariasis) 1

Moniliophthora_perniciosa_FA553__(Genome_survey) 2

TargetDB__(Targets) 2

Protozoadb_2010_08_(Protozoadb) 145

STRING_v9.0.5_(STRING) 204

Uniprot_2018_03_genome 7875

NCBI_2017_08_genome 2866

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Domain combinations for _gap_,48366 superfamilies in groups of genomes