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Home > SCOP hierarchy > Domain combination - _gap_,48371,47769,47769,52200,_gap_

Domain combinations for _gap_,48371,47769,47769,52200,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

48371 - ARM repeat
47769 - SAM/Pointed domain
47769 - SAM/Pointed domain
52200 - Toll/Interleukin receptor TIR domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Bombyx_mori_ (Domestic silkworm) 1

Harpegnathos_saltator_v3.3 (Jerdon's jumping ant) 1

Acromyrmex_echinatior_v3.8 (Panamanian leafcutter ant) 1

Camponotus_floridanus_v3.3 (Florida carpenter ant) 1

Lucilia_cuprina (Australian sheep blowfly) 1

Drosophila_grimshawi_1.3 1

Drosophila_willistoni_1.3 1

Drosophila_pseudoobscura_2.13 1

Drosophila_suzukii 0

Drosophila_yakuba_1.3 1

Drosophila_simulans_1.3 1

Drosophila_sechellia_1.3 1

Drosophila_melanogaster_76_5 (Fruit fly) 8

Drosophila_erecta_1.3 1

Drosophila_virilis_1.2 1

Drosophila_mojavensis_1.3 1

Aedes_aegypti_55_(Not_maintained) (Yellow fever mosquito) 1

Tribolium_castaneum_3.0 (Red flour beetle) 1

Acyrthosiphon_pisum_ (Pea aphid) 1

Strigamia_maritima_22 0

Sarcoptes_scabiei 1

Ixodes_scapularis__(Preliminary) (Black-legged tick) 1

Meloidogyne_incognita_ (Southern root-knot nematode) 1

Onchocerca_volvulus_22 1

Brugia_malayi_WS250 (Agent of lymphatic filariasis) 2

Caenorhabditis_brenneri_ 1

Caenorhabditis_remanei_ 1

Caenorhabditis_elegans_76_235 (Roundworm) 2

Trichinella_spiralis_22 1

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Strains
Genome Number

Drosophila_melanogaster_FlyBase_5.12_(FlyBase) (Fruit fly) 5

Caenorhabditis_elegans_WormBase_WS218__(WormBase) (Roundworm) 2

Longest transcript per gene
Genome Number

Drosophila_melanogaster_69_5 (Fruit fly) 1

Caenorhabditis_elegans_69_215 (Roundworm) 1

Others
Genome Number

Brugia_malayi_v1.0_(Duplicate) (Agent of lymphatic filariasis) 1

STRING_v9.0.5_(STRING) 11

Uniprot_2018_03_genome 4807

NCBI_2017_08_genome 323

TargetDB__(Targets) 1

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