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Home > SCOP hierarchy > Domain combination - _gap_,48371,48371,_gap_,52058,52540,_gap_,56112,50978

Domain combinations for _gap_,48371,48371,_gap_,52058,52540,_gap_,56112,50978 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

48371 - ARM repeat
48371 - ARM repeat
52058 - L domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases
56112 - Protein kinase-like (PK-like)
50978 - WD40 repeat-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Otolemur_garnettii_76_3 (Small-eared galago) 1

Oryctolagus_cuniculus_76_2 (Rabbit) 1

Bos_taurus_76_3.1 (Cattle) 1

Ovis_aries_76_3.1 (Sheep) 1

Vicugna_pacos_76_1 (Alpaca) 1

Mustela_putorius_furo_76_1.0 (Domestic ferret) 0

Ailuropoda_melanoleuca_76_1 (Giant panda) 0

Canis_familiaris_76_3.1 (Dog) 0

Equus_caballus_76_2 (Horse) 1

Myotis_lucifugus_76_2.0 (Little brown bat) 1

Pteropus_vampyrus_76_1 (Large flying fox) 1

Monodelphis_domestica_76_5 (Gray short-tailed opossum) 1

Taeniopygia_guttata_76_3.2.4 (Zebra finch) 1

Pelodiscus_sinensis_76_1.0 (Chinese soft-shelled turtle) 0

Longest transcript per gene
Genome Number

Otolemur_garnettii_69_3 (Small-eared galago) 1

Oryctolagus_cuniculus_69_2 (Rabbit) 1

Bos_taurus_69_3.1 (Cattle) 1

Vicugna_pacos_69_1 (Alpaca) 1

Mustela_putorius_furo_69_1.0 (Domestic ferret) 0

Ailuropoda_melanoleuca_69_1 (Giant panda) 0

Canis_familiaris_69_3.1 (Dog) 0

Equus_caballus_69_2 (Horse) 1

Myotis_lucifugus_69_2.0 (Little brown bat) 1

Pteropus_vampyrus_69_1 (Large flying fox) 1

Monodelphis_domestica_69_5 (Gray short-tailed opossum) 1

Taeniopygia_guttata_69_3.2.4 (Zebra finch) 1

Pelodiscus_sinensis_69_1.0 (Chinese soft-shelled turtle) 0

Others
Genome Number

NCBI_2017_08_genome 84

STRING_v9.0.5_(STRING) 5

Uniprot_2018_03_genome 1428

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