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Domain combinations for _gap_,48371,_gap_,48371,_gap_,48371,_gap_,56112,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

48371 - ARM repeat
48371 - ARM repeat
48371 - ARM repeat
56112 - Protein kinase-like (PK-like)

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   2
Pongo_abelii_76_2   (Sumatran orangutan)   1
Macaca_mulatta_76_1   (Rhesus monkey)   3
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   1
Otolemur_garnettii_76_3   (Small-eared galago)   1
Rattus_norvegicus_76_5.0   (Norway rat)   1
Oryctolagus_cuniculus_76_2   (Rabbit)   1
Tursiops_truncatus_76_1   (Bottlenose dolphin)   1
Ailuropoda_melanoleuca_76_1   (Giant panda)   1
Canis_familiaris_76_3.1   (Dog)   1
Saccoglossus_kowalevskii_v3.0 7
Anas_platyrhynchos_76_1.0   (Mallard)   1
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   1
Lepisosteus_oculatus_76   (Spotted gar)   1
Takifugu_rubripes_76_4   (Torafugu)   1
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   1
Oreochromis_niloticus_76_1.0   (Nile tilapia)   1
Astyanax_mexicanus_76   (Mexican tetra)   2
Danio_rerio_76_9   (Zebrafish)   1
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   2
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   1
Camponotus_floridanus_v3.3   (Florida carpenter ant)   1
Rhodnius_prolixus_22 1
Daphnia_pulex_   (Common water flea)   1
Caenorhabditis_remanei_ 1
Conidiobolus_coronatus_NRRL28638_v1.0 1
Mortierella_verticillata_NRRL_6337_ 1
Rhizomucor_miehei_CAU432_ 1
Mixia_osmundae_IAM_14324_v1.0 1
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 1
Melampsora_laricis-populina_ 1
Piloderma_croceum_F_1598_v1.0 1
Amanita_muscaria_Koide_v1.0   (Fly agaric)   1
Fomitopsis_pinicolav1.0 1
Fomitopsis_pinicola_FP-58527_SS1_v3.0 1
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 1
Candida_dubliniensis_CD36_ 1
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 1
Debaromyces_hansenii 1
Pichia_pastoris_GS115_ 1
Lachancea_kluyveri_ 1
Kluyveromyces_waltii 1
Saccharomyces_paradoxus_MIT 1
Saccharomyces_cerevisiae_76   (Baker's yeast)   1
Physcomitrella_patens 1
Asterochloris_sp._Cgr/DA1pho_v1.0 1
Thecamonas_trahens_ATCC_50062_ 1
Pythium_iwayamai_DAOM_BR242034_22 2
Pythium_ultimum_v1.7-2 1
Pythium_aphanidermatum_DAOM_BR444_22 1
Phaeodactylum_tricornutumCCAP_1055/1 1

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   1
Saccharomyces_cerevisiae_CBS7960 1
Saccharomyces_cerevisiae_YJM269 1
Saccharomyces_cerevisiae_T7 1
Saccharomyces_cerevisiae_Sigma1278b 1
Saccharomyces_cerevisiae_W303 1
Saccharomyces_cerevisiae_YJM789_ 1
Saccharomyces_cerevisiae_YJM789 1
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   1

Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   2
Pongo_abelii_69_2   (Sumatran orangutan)   1
Macaca_mulatta_69_1   (Rhesus monkey)   1
Otolemur_garnettii_69_3   (Small-eared galago)   1
Rattus_norvegicus_69_3.4   (Norway rat)   2
Oryctolagus_cuniculus_69_2   (Rabbit)   1
Tursiops_truncatus_69_1   (Bottlenose dolphin)   1
Ailuropoda_melanoleuca_69_1   (Giant panda)   1
Gallus_gallus_69_2   (Chicken)   1
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   1
Takifugu_rubripes_69_4   (Torafugu)   1
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   1
Oreochromis_niloticus_69_1.0   (Nile tilapia)   1
Danio_rerio_69_9   (Zebrafish)   1
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   1

Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   4
STRING_v9.0.5_(STRING) 17
Uniprot_2018_03_genome 5336
NCBI_2017_08_genome 427

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