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  Home > SCOP hierarchy > Domain combination - _gap_,48452,48452

Domain combinations for _gap_,48452,48452 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

48452 - TPR-like
48452 - TPR-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   28
Pan_troglodytes_76_2.1.4   (Chimpanzee)   13
Gorilla_gorilla_76_3.1   (Western gorilla)   19
Pongo_abelii_76_2   (Sumatran orangutan)   14
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   12
Papio_anubis_76   (Olive baboon)   8
Macaca_mulatta_76_1   (Rhesus monkey)   19
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   20
Otolemur_garnettii_76_3   (Small-eared galago)   10
Microcebus_murinus_76_1   (Gray mouse lemur)   7
Rattus_norvegicus_76_5.0   (Norway rat)   10
Mus_musculus_76_38   (House mouse)   20
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   8
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   8
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   11
Cavia_porcellus_76_3   (Domestic guinea pig)   12
Oryctolagus_cuniculus_76_2   (Rabbit)   13
Ochotona_princeps_76   (American pika)   7
Tupaia_belangeri_76   (Northern tree shrew)   6
Sus_scrofa_76_10.2   (Pig)   7
Bos_taurus_76_3.1   (Cattle)   10
Ovis_aries_76_3.1   (Sheep)   11
Vicugna_pacos_76_1   (Alpaca)   6
Tursiops_truncatus_76_1   (Bottlenose dolphin)   13
Mustela_putorius_furo_76_1.0   (Domestic ferret)   10
Ailuropoda_melanoleuca_76_1   (Giant panda)   12
Canis_familiaris_76_3.1   (Dog)   15
Felis_catus_76_6.2   (Domestic cat)   10
Equus_caballus_76_2   (Horse)   13
Myotis_lucifugus_76_2.0   (Little brown bat)   11
Pteropus_vampyrus_76_1   (Large flying fox)   11
Sorex_araneus_76_1   (European shrew)   8
Erinaceus_europaeus_76   (Western European hedgehog)   6
Procavia_capensis_76_1   (Cape rock hyrax)   8
Loxodonta_africana_76_3   (African savanna elephant)   14
Echinops_telfairi_76   (Small Madagascar hedgehog)   9
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   13
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   7
Macropus_eugenii_76_1.0   (Tammar wallaby)   5
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   12
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   14
Ornithorhynchus_anatinus_76_5   (Platypus)   6
Saccoglossus_kowalevskii_v3.0 31
Petromyzon_marinus_76_7.0   (Sea lamprey)   2
Meleagris_gallopavo_76_2   (Turkey)   12
Gallus_gallus_76_4   (Chicken)   11
Anas_platyrhynchos_76_1.0   (Mallard)   9
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   13
Ficedula_albicollis_76_1.0   (Collared flycatcher)   11
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   12
Anolis_carolinensis_76_2.0   (Green anole)   8
Xenopus_laevis_   (African clawed frog)   10
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   20
Latimeria_chalumnae_76_1   (Coelacanth)   10
Lepisosteus_oculatus_76   (Spotted gar)   10
Gadus_morhua_76_1   (Atlantic cod)   9
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   8
Takifugu_rubripes_76_4   (Torafugu)   19
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   8
Oryzias_latipes_76_1   (Japanese medaka)   12
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   13
Poecilia_formosa_76   (Amazon molly)   9
Oreochromis_niloticus_76_1.0   (Nile tilapia)   18
Astyanax_mexicanus_76   (Mexican tetra)   6
Danio_rerio_76_9   (Zebrafish)   13
Oikopleura_dioica 6
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   8
Ciona_intestinalis_76   (Vase tunicate)   5
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   9
Adineta_vaga 14
Octopus_bimaculoides_280 7
Crassostrea_gigas_22   (Pacific oyster)   8
Lottia_gigantea_   (Owl limpet)   9
Helobdella_robusta_ 2
Capitella_sp._I_ 14
Danaus_plexippus_OGS1.0   (Monarch butterfly)   7
Heliconius_melpomene_   (Postman butterfly)   6
Bombyx_mori_   (Domestic silkworm)   0
Nasonia_vitripennis_   (Jewel wasp)   5
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   7
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   5
Linepithema_humile_v1.1   (Argentine ant)   4
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   4
Solenopsis_invicta_v.2.2.3   (Red fire ant)   4
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   3
Atta_cephalotes_v1.1 3
Camponotus_floridanus_v3.3   (Florida carpenter ant)   4
Lucilia_cuprina   (Australian sheep blowfly)   3
Drosophila_grimshawi_1.3 7
Drosophila_willistoni_1.3 4
Drosophila_pseudoobscura_2.13 4
Drosophila_persimilis_1.3 4
Drosophila_suzukii 6
Drosophila_yakuba_1.3 5
Drosophila_simulans_1.3 4
Drosophila_sechellia_1.3 6
Drosophila_melanogaster_76_5   (Fruit fly)   11
Drosophila_erecta_1.3 7
Drosophila_ananassae_1.3 6
Drosophila_virilis_1.2 6
Drosophila_mojavensis_1.3 7
Megaselia_scalaris_22 0
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   4
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   4
Anopheles_darlingi_22   (American malaria mosquito)   0
Anopheles_gambiae_49_3j   (African malaria mosquito)   4
Tribolium_castaneum_3.0   (Red flour beetle)   2
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   4
Acyrthosiphon_pisum_   (Pea aphid)   3
Rhodnius_prolixus_22 2
Daphnia_pulex_   (Common water flea)   5
Strigamia_maritima_22 8
Sarcoptes_scabiei 5
Tetranychus_urticae_   (Two-spotted spider mite)   3
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   7
Pristionchus_pacificus_ 1
Meloidogyne_incognita_   (Southern root-knot nematode)   2
Meloidogyne_hapla_ 1
Onchocerca_volvulus_22 2
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   5
Caenorhabditis_japonica_ 2
Caenorhabditis_brenneri_ 2
Caenorhabditis_remanei_ 3
Caenorhabditis_elegans_76_235   (Roundworm)   4
Caenorhabditis_briggsae_2 2
Trichinella_spiralis_22 1
Hymenolepis_microstoma_ 3
Echinococcus_multilocularis_ 2
Echinococcus_granulosus_ 3
Taenia_solium_   (Pork tapeworm)   5
Schistosoma_mansoni_ 4
Mnemiopsis_leidyi   (Sea walnut)   3
Thelohanellus_kitauei 1
Acropora_digitifera_v1.0 3
Nematostella_vectensis_1.0   (Starlet sea anemone)   5
Hydra_vulgaris 2
Amphimedon_queenslandica 6
Trichoplax_adhaerens_ 4
Proterospongia_sp._ATCC_50818_ 14
Monosiga_brevicollis_ 4
Sphaeroforma_arctica_JP610_ 2
Capsaspora_owczarzaki_ATCC_30864_ 7
Conidiobolus_coronatus_NRRL28638_v1.0 2
Mortierella_verticillata_NRRL_6337_ 2
Phycomyces_blakesleeanus_ 2
Rhizopus_oryzae_RA_99-880_ 4
Mucor_circinelloides_ 6
Rhizomucor_miehei_CAU432_ 4
Malassezia_globosa_CBS_7966_ 6
Sporisorium_reilianum_22 2
Ustilago_maydis_ 2
Mixia_osmundae_IAM_14324_v1.0 0
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 2
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 1
Melampsora_laricis-populina_ 3
Rhodotorula_graminis_WP1_v1.0 1
Sporobolomyces_roseus_IAM_13481_ 0
Microbotryum_violaceum_22 3
Wallemia_sebi_v1.0 0
Sphaerobolus_stellatus_v1.0 10
Piloderma_croceum_F_1598_v1.0 6
Serpula_lacrymans_var._lacrymans_S7.9_ 1
Coniophora_puteana 2
Hydnomerulius_pinastri_v2.0 3
Paxillus_rubicundulus_Ve08.2h10_v1.0 1
Pisolithus_microcarpus_441_v1.0 2
Pisolithus_tinctorius_Marx_270_v1.0 1
Scleroderma_citrinum_Foug_A_v1.0 1
Coprinopsis_cinerea_okayama7_130_v3 3
Pleurotus_ostreatus_   (Oyster mushroom)   2
Amanita_thiersii_Skay4041_v1.0 4
Amanita_muscaria_Koide_v1.0   (Fly agaric)   2
Galerina_marginata_v1.0 2
Hebeloma_cylindrosporum_h7_v2.0 1
Laccaria_bicolor_S238N-H82_ 4
Agaricus_bisporus_var._bisporus_ 1
Schizophyllum_commune_ 1
Stereum_hirsutum_FP-91666_SS1__v1.0 2
Heterobasidion_annosum_ 1
Gloeophyllum_trabeumv1.0 3
Punctularia_strigosozonata_v1.0 2
Sebacina_vermifera_MAFF_305830_v1.0 2
Fomitiporia_mediterranea_v1.0 1
Tulasnella_calospora_AL13/4D_v1.0 7
Postia_placenta_ 6
Wolfiporia_cocos_MD-104_SS10__v1.0 1
Fomitopsis_pinicolav1.0 0
Fomitopsis_pinicola_FP-58527_SS1_v3.0 0
Phanerochaete_chrysosporium_RP-78_2.1 0
Dichomitus_squalens 4
Trametes_versicolor_v1.0 2
Tremella_mesenterica_   (Witches' butter)   3
Daldinia_eschscholzii_EC12_v1.0 2
Apiospora_montagnei_NRRL_25634_v1.0 3
Magnaporthe_poae_ATCC_64411_22 1
Magnaporthe_grisea_70-15_ 2
Podospora_anserina_ 1
Sporotrichum_thermophile_ATCC_42464_ 2
Thielavia_terrestris_NRRL_8126_ 1
Chaetomium_globosum_CBS_148.51_ 2
Neurospora_tetrasperma_ 0
Neurospora_discreta_FGSC_8579_ 1
Neurospora_crassa_OR74A_ 2
Cryphonectria_parasitica_   (Chestnut blight fungus)   2
Verticillium_albo-atrum_VaMs.102_ 0
Verticillium_dahliae_VdLs.17_ 1
Acremonium_alcalophilumv_1.0 1
Glomerella_graminicola_22 2
Fusarium_graminearum_ 4
Nectria_haematococca_mpVI_ 1
Fusarium_oxysporum_f._sp._lycopersici_4286_ 2
Fusarium_verticillioides_7600_ 2
Trichoderma_asperellum_CBS_433.97_v1.0 2
Trichoderma_atroviride_ 3
Trichoderma_citrinoviride_v1.0 1
Trichoderma_reesei_1.2 2
Trichoderma_virens_Gv29-8_ 2
Trichoderma_longibrachiatum_ATCC_18648_v1.0 1
Trichoderma_harzianum_CBS_226.95_v1.0 3
Amorphotheca_resinae_v1.0   (Creosote fungus)   1
Botrytis_cinerea_B05.10_ 0
Sclerotinia_sclerotiorum_ 0
Blumeria_graminis_22 1
Didymella_exigua_CBS_183.55_v1.0 3
Leptosphaeria_maculans_22 3
Setosphaeria_turcica_v1.0 1
Cochliobolus_miyabeanus_ATCC_44560_v1.0 1
Cochliobolus_victoriae_FI3_v1.0 1
Cochliobolus_carbonum_26-R-13_v1.0 1
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   1
Alternaria_brassicicola_ 1
Cochliobolus_lunatus_m118_v2.0 2
Pyrenophora_teres_f._teres_22 1
Pyrenophora_tritici-repentis_ 3
Stagonospora_nodorum_ 0
Mycosphaerella_graminicola_IPO323_ 1
Zasmidium_cellare_ATCC_36951_v1.0 2
Dothistroma_septosporum 1
Septoria_musiva_v1.0 3
Mycosphaerella_fijiensis_CIRAD86_ 0
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 2
Paracoccidioides_brasiliensis_Pb18_ 1
Coccidioides_posadasii_RMSCC_3488_ 2
Coccidioides_immitis_RS_ 0
Ajellomyces_dermatitidis_SLH14081_ 0
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 0
Microsporum_canis_CBS_113480_ 2
Trichophyton_equinum_CBS_127.97_ 3
Trichophyton_verrucosum_HKI_0517_ 0
Arthroderma_benhamiae_CBS_112371_ 1
Trichophyton_tonsurans_CBS_112818_ 3
Trichophyton_rubrum_CBS_118892_ 2
Uncinocarpus_reesii_1704_ 1
Aspergillus_zonatus_v1.0 0
Penicillium_chrysogenum_Wisconsin_54-1255_ 2
Penicillium_chrysogenum_v1.0 2
Aspergillus_acidus_v1.0 2
Aspergillus_fumigatus_Af293 0
Aspergillus_brasiliensis_v1.0 2
Aspergillus_nidulans_FGSC_A4_ 2
Aspergillus_sydowii_v1.0 4
Aspergillus_versicolor_v1.0 3
Aspergillus_glaucus 0
Aspergillus_carbonarius_ITEM_5010_ 2
Neosartorya_fischeri_NRRL_181_ 1
Aspergillus_terreus_NIH2624_ 2
Aspergillus_tubingensis_v1.0 2
Aspergillus_wentii_v1.0 2
Aspergillus_oryzae_RIB40_ 1
Aspergillus_niger_22 2
Aspergillus_niger_ATCC_1015_ 2
Aspergillus_flavus_NRRL3357_ 2
Aspergillus_clavatus_NRRL_1_ 1
Penicillium_marneffei_ATCC_18224_ 2
Tuber_melanosporum_Mel28_22 1
Tuber_melanosporum_Vittad_   (Perigord truffle)   2
Hansenula_polymorpha_v2.0 0
Dekkera_bruxellensis_CBS_2499_v2.0 1
Pichia_membranifaciensv1.0 0
Candida_tanzawaensis_NRRL_Y-17324__v1.0 0
Candida_dubliniensis_CD36_ 2
Candida_tropicalis_MYA-3404_ 2
Candida_parapsilosis_ 0
Candida_albicans_SC5314 0
Lodderomyces_elongisporus_NRRL_YB-4239_ 2
Babjeviella_inositovora_NRRL_Y-12698_v1.0 2
Pichia_stipitis_CBS_6054_ 1
Candida_guilliermondii_ATCC_6260_ 1
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 1
Debaromyces_hansenii 1
Wickerhamomyces_anomalus 2
Pichia_pastoris_GS115_ 1
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 1
Yarrowia_lipolytica_CLIB122 2
Candida_lusitaniae_ATCC_42720_ 1
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 1
Vanderwaltozyma_polyspora_DSM_70294_ 2
Candida_glabrata_CBS138 4
Kluyveromyces_thermotolerans_CBS_6340 2
Lachancea_kluyveri_ 2
Kluyveromyces_waltii 3
Ashbya_gossypii_ATCC_10895_ 2
Zygosaccharomyces_rouxii_ 2
Saccharomyces_mikatae_MIT 5
Saccharomyces_paradoxus_MIT 2
Saccharomyces_cerevisiae_76   (Baker's yeast)   1
Saccharomyces_bayanus_MIT 3
Kluyveromyces_lactis 2
Schizosaccharomyces_cryophilus_OY26_22 1
Schizosaccharomyces_octosporus_yFS286_ 2
Schizosaccharomyces_japonicus_yFS275_ 1
Schizosaccharomyces_pombe   (Fission yeast)   2
Catenaria_anguillulae_PL171_v1.0 1
Allomyces_macrogynus_ATCC_38327_ 4
Spizellomyces_punctatus_DAOM_BR117_ 2
Dictyostelium_discoideum 4
Dictyostelium_purpureum_ 2
Entamoeba_dispar_1.2 0
Entamoeba_invadens_1.2 1
Entamoeba_histolytica_1 0
Selaginella_moellendorffii_ 15
Pinus_taeda   (Loblolly pine)   9
Picea_abies   (Norway spruce)   19
Eucalyptus_grandis_v201   (Rose gum)   14
Theobroma_cacao_B97-61/B2_v1   (Cacao)   13
Gossypium_raimondii_v221 33
Citrus_clementina_v165 20
Citrus_sinensis_v154   (Sweet orange)   13
Thellungiella_halophila_v173 10
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   13
Capsella_rubella_v183 13
Arabidopsis_lyrata_   (Lyrate rockcress)   12
Arabidopsis_thaliana_10   (Thale cress)   19
Carica_papaya_   (Papaya)   7
Medicago_truncatula_   (Barrel medic)   22
Phaseolus_vulgaris_v186   (French bean)   18
Glycine_max_v109   (Soybean)   26
Cucumis_sativus_v122   (Cucumber)   15
Fragaria_vesca_   (Wild strawberry)   5
Malus_domestica_v196   (Apple)   8
Prunus_persica_v139   (Peach)   11
Linum_usitatissimum_v200   (Flax)   24
Manihot_esculenta_v147   (Cassava)   12
Populus_trichocarpa_v156   (Black cottonwood)   12
Vitis_vinifera_   (Wine grape)   11
Mimulus_guttatus_v140   (Spotted monkey flower)   12
Solanum_lycopersicum_v.2.3   (Tomato)   11
Solanum_tuberosum_   (Potato)   15
Actinidia_chinensis_Hongyang_ 9
Aquilegia_coerulea_v195 9
Triticum_urartu_22 4
Triticum_aestivum_22   (Bread wheat)   15
Aegilops_tauschii_22 8
Brachypodium_distachyon_   (Stiff brome)   14
Oryza_barthii_22   (African wild rice)   15
Oryza_meridionalis_22 11
Oryza_glumaepatula_22 14
Oryza_glaberrima   (African rice)   9
Oryza_punctata_22 8
Oryza_nivara_22 11
Oryza_brachyantha_22   (Malo sina)   10
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   16
Oryza_sativa_v193   (Rice)   16
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   5
Panicum_virgatum_v202   (Switchgrass)   10
Setaria_italica_v164   (Foxtail millet)   11
Zea_mays_subsp._mays_   (Maize)   13
Zea_mays_v181   (Maize)   11
Sorghum_bicolor_   (Sorghum)   10
Musa_balbisiana   (Balbis banana)   9
Musa_acuminata_22   (Wild Malaysian banana)   10
Amborella_trichopoda_22 6
Physcomitrella_patens 7
Coccomyxa_subellipsoidea_sp._C-169_v2 4
Asterochloris_sp._Cgr/DA1pho_v1.0 2
Chlorella_variabilis_sp._NC64A_ 0
Chlorella_vulgaris_ 2
Volvox_carteri_f._nagariensis_ 3
Volvox_carteri_v199 3
Chlamydomonas_reinhardtii_4.0 7
Ostreococcus_lucimarinus_CCE9901_ 1
Ostreococcus_tauri_ 2
Bathycoccus_prasinos_ 2
Micromonas_sp._RCC299_ 0
Micromonas_pusilla_CCMP1545_v3.0 4
Cyanidioschyzon_merolae_strain_10D_22 3
Cyanidioschyzon_merolae 3
Porphyridium_purpureum_02_2012 3
Thecamonas_trahens_ATCC_50062_ 3
Bigelowiella_natans_CCMP2755_22 4
Giardia_lamblia_2.3 1
Cyanophora_paradoxa_ 1
Leishmania_mexicana_2.4 3
Leishmania_major_strain_Friedlin_ 4
Leishmania_infantum_JPCM5_2.4 5
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 1
Trypanosoma_vivax_ 2
Trypanosoma_cruzi_strain_CL_Brener 2
Trypanosoma_congolense_2.4 2
Trypanosoma_brucei_gambiense_v4.1 4
Trypanosoma_brucei_TREU927_v4.1 3
Ectocarpus_siliculosus 7
Aureococcus_anophagefferens_ 3
Albugo_laibachii_22 10
Pythium_iwayamai_DAOM_BR242034_22 5
Pythium_arrhenomanes_ATCC_12531_22 2
Pythium_ultimum_v1.7-2 3
Pythium_aphanidermatum_DAOM_BR444_22 5
Pythium_irregulare_DAOM_BR486_22 4
Pythium_vexans_DAOM_BR484_22 4
Phytophthora_ramorum_1.1   (Sudden oak death agent)   2
Phytophthora_sojae_1.1 4
Phytophthora_infestans_T30-4_ 2
Phytophthora_capsici_ 0
Hyaloperonospora_arabidopsidis_22 1
Phaeodactylum_tricornutumCCAP_1055/1 8
Fragilariopsis_cylindrus 7
Thalassiosira_pseudonana_CCMP1335 3
Perkinsus_marinus_ATCC_50983_ 2
Paramecium_tetraurelia_ 24
Tetrahymena_thermophila_SB210_1_ 10
Ichthyophthirius_multifiliis_strain_G5_ 4
Cryptosporidium_hominis 1
Cryptosporidium_muris 1
Cryptosporidium_parvum_Iowa_II 1
Neospora_caninum 2
Toxoplasma_gondii_VEG 1
Toxoplasma_gondii_ME49 1
Toxoplasma_gondii_GT1 1
Babesia_bovis_T2Bo_ 0
Theileria_parva__ 0
Theileria_annulata 0
Plasmodium_falciparum_3D7_ 1
Plasmodium_vivax_SaI-1_7.0 1
Plasmodium_knowlesi_strain_H_ 1
Plasmodium_yoelii_ssp._yoelii_1_ 1
Plasmodium_chabaudi_ 1
Plasmodium_berghei_ANKA_ 1
Symbiodinium_minutum_clade_B1_v1.2 15
Naegleria_gruberi_ 11
Trichomonas_vaginalis_ 4
Guillardia_theta_CCMP2712_v1.0_ 11
Emiliania_huxleyi_CCMP1516_ 2
Leptolyngbya_sp._PCC_7376 3
Pseudanabaena_sp._PCC_7367 0
Acaryochloris_marina_MBIC11017 1
Synechococcus_sp._PCC_7502 2
Microcoleus_sp._PCC_7113 2
Trichodesmium_erythraeum_IMS101 3
Geitlerinema_sp._PCC_7407 1
Cyanothece_sp._PCC_8802 2
Gloeocapsa_sp._PCC_7428 1
Microcystis_aeruginosa_NIES-843 2
Gloeobacter_violaceus_PCC_7421 2
Rivularia_sp._PCC_7116 2
Calothrix_sp._PCC_7507 3
Anabaena_variabilis_ATCC_29413 1
Nostoc_sp._PCC_7107 2
Nostoc_punctiforme_PCC_73102 3
Nostoc_sp._PCC_7120 2
Nostoc_sp._PCC_7524 2
Anabaena_sp._90 2
Conexibacter_woesei_DSM_14684 0
Nakamurella_multipartita_DSM_44233 0
Modestobacter_marinus 0
Blastococcus_saxobsidens_DD2 0
Geodermatophilus_obscurus_DSM_43160 0
Catenulispora_acidiphila_DSM_44928 1
Stackebrandtia_nassauensis_DSM_44728 0
Frankia_symbiont_of_Datisca_glomerata 0
Frankia_sp._EAN1pec 1
Frankia_alni_ACN14a 0
Thermobifida_fusca_YX 0
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 0
Thermomonospora_curvata_DSM_43183 2
Streptosporangium_roseum_DSM_43021 1
Kitasatospora_setae_KM-6054 1
Streptomyces_coelicolor_A3(2) 0
Streptomyces_sp._PAMC26508 1
Streptomyces_flavogriseus_ATCC_33331 0
Streptomyces_sp._SirexAA-E 0
Streptomyces_griseus_subsp._griseus_NBRC_13350 1
Streptomyces_bingchenggensis_BCW-1 2
Streptomyces_violaceusniger_Tu_4113 1
Streptomyces_avermitilis_MA-4680 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 0
Streptomyces_scabiei_87.22 2
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 1
Actinosynnema_mirum_DSM_43827 1
Saccharomonospora_viridis_DSM_43017 1
Pseudonocardia_dioxanivorans_CB1190 1
Saccharopolyspora_erythraea_NRRL_2338 0
Amycolatopsis_mediterranei_U32 1
Kribbella_flavida_DSM_17836 0
Propionibacterium_propionicum_F0230a 0
Microlunatus_phosphovorus_NM-1 0
Salinispora_arenicola_CNS-205 0
Verrucosispora_maris_AB-18-032 0
Micromonospora_sp._L5 1
Micromonospora_aurantiaca_ATCC_27029 1
Actinoplanes_sp._N902-109 1
Actinoplanes_sp._SE50/110 2
Actinoplanes_missouriensis_431 0
Gordonia_sp._KTR9 0
Gordonia_polyisoprenivorans_VH2 0
Gordonia_bronchialis_DSM_43247 0
Rhodococcus_jostii_RHA1 0
Rhodococcus_opacus_B4 0
Nocardia_cyriacigeorgica_GUH-2 0
Mycobacterium_abscessus_ATCC_19977 0
Mycobacterium_sp._JLS 0
Mycobacterium_vanbaalenii_PYR-1 0
Mycobacterium_canettii_CIPT_140010059 0
Mycobacterium_tuberculosis_KZN_1435 0
Mycobacterium_tuberculosis 0
Mycobacterium_bovis_BCG_str._Pasteur_1173P2 0
Mycobacterium_rhodesiae_NBB3 0
Mycobacterium_chubuense_NBB4 1
Mycobacterium_marinum_M 0
Mycobacterium_smegmatis_str._MC2_155 0
Sanguibacter_keddieii_DSM_10542 1
Beutenbergia_cavernae_DSM_12333 0
Microbacterium_testaceum_StLB037 1
Jonesia_denitrificans_DSM_20603 1
Arthrobacter_chlorophenolicus_A6 0
Micrococcus_luteus_NCTC_2665 1
Actinomyces_sp._F0330 1
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 1
Anaerolinea_thermophila_UNI-1 1
Sphaerobacter_thermophilus_DSM_20745 0
Herpetosiphon_aurantiacus_DSM_785 1
Roseiflexus_sp._RS-1 0
Roseiflexus_castenholzii_DSM_13941 0
Chloroflexus_sp._MS-G 1
Chloroflexus_sp._Y-400-fl 1
Chloroflexus_aggregans_DSM_9485 0
Chloroflexus_aurantiacus_J-10-fl 1
Truepera_radiovictrix_DSM_17093 1
Deinococcus_gobiensis_I-0 0
Deinococcus_deserti_VCD115 1
Deinococcus_maricopensis_DSM_21211 1
Deinococcus_geothermalis_DSM_11300 1
Deinococcus_proteolyticus_MRP 2
Deinococcus_radiodurans_R1 1
Oceanithermus_profundus_DSM_14977 0
Meiothermus_silvanus_DSM_9946 3
Meiothermus_ruber_DSM_1279 1
Thermus_sp._CCB_US3_UF1 0
Thermus_scotoductus_SA-01 1
Acidaminococcus_fermentans_DSM_20731 1
Clostridiales_genomosp._BVAB3_str._UPII9-5 1
Clostridium_clariflavum_DSM_19732 0
Clostridium_cellulolyticum_H10 1
Sulfobacillus_acidophilus_DSM_10332 1
Candidatus_Desulforudis_audaxviator_MP104C 1
Pelotomaculum_thermopropionicum_SI 1
Desulfosporosinus_orientis_DSM_765 0
Desulfotomaculum_acetoxidans_DSM_771 1
Desulfotomaculum_carboxydivorans_CO-1-SRB 1
Clostridium_saccharolyticum_WM1 0
Clostridium_phytofermentans_ISDg 0
Eubacterium_rectale_M104/1 0
Eubacterium_rectale_ATCC_33656 0
Butyrivibrio_proteoclasticus_B316 0
Candidatus_Arthromitus_sp._SFB-mouse-Japan 1
Clostridium_sp._BNL1100 1
Clostridium_cellulovorans_743B 0
Caldicellulosiruptor_kronotskyensis_2002 0
Caldicellulosiruptor_saccharolyticus_DSM_8903 0
Caldicellulosiruptor_bescii_DSM_6725 0
Acetohalobium_arabaticum_DSM_5501 0
Pediococcus_pentosaceus_ATCC_25745 0
Streptococcus_parauberis_KCTC_11537 1
Streptococcus_gordonii_str._Challis_substr._CH1 0
Brevibacillus_brevis_NBRC_100599 1
Paenibacillus_sp._JDR-2 0
Paenibacillus_terrae_HPL-003 0
Paenibacillus_mucilaginosus_3016 0
Solibacillus_silvestris_StLB046 0
Geobacillus_thermoglucosidasius_C56-YS93 0
Geobacillus_thermoleovorans_CCB_US3_UF5 0
Geobacillus_kaustophilus_HTA426 0
Geobacillus_sp._GHH01 0
Geobacillus_thermodenitrificans_NG80-2 0
Bacillus_thuringiensis_str._Al_Hakam 0
Bacillus_cereus_03BB102 0
Candidatus_Cloacamonas_acidaminovorans 0
Gemmatimonas_aurantiaca_T-27 2
Pelodictyon_phaeoclathratiforme_BU-1 1
Chlorobium_chlorochromatii_CaD3 1
Chlorobium_phaeobacteroides_DSM_266 0
Chlorobium_limicola_DSM_245 1
Chlorobaculum_parvum_NCIB_8327 0
Chloroherpeton_thalassium_ATCC_35110 3
Prosthecochloris_aestuarii_DSM_271 0
Haliscomenobacter_hydrossis_DSM_1100 0
Saprospira_grandis_str._Lewin 1
Niastella_koreensis_GR20-10 0
Chitinophaga_pinensis_DSM_2588 2
Salinibacter_ruber_M8 3
Rhodothermus_marinus_DSM_4252 0
Flexibacter_litoralis_DSM_6794 0
Candidatus_Amoebophilus_asiaticus_5a2 0
Candidatus_Cardinium_hertigii 0
Belliella_baltica_DSM_15883 0
Cyclobacterium_marinum_DSM_745 2
Marivirga_tractuosa_DSM_4126 0
Fibrella_aestuarina 2
Leadbetterella_byssophila_DSM_17132 2
Dyadobacter_fermentans_DSM_18053 2
Cytophaga_hutchinsonii_ATCC_33406 2
Spirosoma_linguale_DSM_74 3
Runella_slithyformis_DSM_19594 1
Parabacteroides_distasonis_ATCC_8503 0
Tannerella_forsythia_ATCC_43037 1
Paludibacter_propionicigenes_WB4 0
Prevotella_melaninogenica_ATCC_25845 1
Prevotella_denticola_F0289 1
Prevotella_ruminicola_23 0
Porphyromonas_gingivalis_ATCC_33277 2
Alistipes_finegoldii_DSM_17242 1
Bacteroides_salanitronis_DSM_18170 0
Bacteroides_vulgatus_ATCC_8482 0
Bacteroides_fragilis_YCH46 0
Pedobacter_saltans_DSM_12145 1
Solitalea_canadensis_DSM_3403 1
Pedobacter_heparinus_DSM_2366 0
Sphingobacterium_sp._21 1
Fluviicola_taffensis_DSM_16823 0
Owenweeksia_hongkongensis_DSM_17368 0
Zunongwangia_profunda_SM-A87 1
Krokinobacter_sp._4H-3-7-5 0
Gramella_forsetii_KT0803 1
Maribacter_sp._HTCC2170 1
Robiginitalea_biformata_HTCC2501 1
Croceibacter_atlanticus_HTCC2559 1
Aequorivita_sublithincola_DSM_14238 1
Zobellia_galactanivorans 0
Muricauda_ruestringensis_DSM_13258 1
Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 0
Capnocytophaga_canimorsus_Cc5 1
Capnocytophaga_ochracea_DSM_7271 1
Flavobacterium_psychrophilum_JIP02/86 0
Flavobacterium_johnsoniae_UW101 0
Fibrobacter_succinogenes_subsp._succinogenes_S85 0
Waddlia_chondrophila_WSU_86-1044 2
Candidatus_Protochlamydia_amoebophila_UWE25 2
Chlamydophila_pneumoniae_TW-183 0
Chlamydophila_caviae_GPIC 1
Chlamydophila_abortus_S26/3 1
Chlamydia_psittaci_01DC11 1
Phycisphaera_mikurensis_NBRC_102666 1
Isosphaera_pallida_ATCC_43644 2
Planctomyces_brasiliensis_DSM_5305 4
Planctomyces_limnophilus_DSM_3776 2
Rhodopirellula_baltica_SH_1 3
Pirellula_staleyi_DSM_6068 0
Methylacidiphilum_infernorum_V4 1
Coraliomargarita_akajimensis_DSM_45221 2
Opitutus_terrae_PB90-1 6
Akkermansia_muciniphila_ATCC_BAA-835 1
Turneriella_parva_DSM_21527 0
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 0
Leptospira_interrogans_serovar_Lai_str._IPAV 0
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 0
Brachyspira_murdochii_DSM_12563 2
Brachyspira_intermedia_PWS/A 3
Brachyspira_pilosicoli_95/1000 2
Brachyspira_hyodysenteriae_WA1 4
Borrelia_garinii_PBi 2
Borrelia_bissettii_DN127 2
Borrelia_afzelii_PKo 2
Borrelia_burgdorferi_B31 1
Borrelia_recurrentis_A1 1
Borrelia_duttonii_Ly 2
Borrelia_crocidurae_str._Achema 1
Borrelia_turicatae_91E135 3
Borrelia_hermsii_DAH 1
Spirochaeta_smaragdinae_DSM_11293 3
Sphaerochaeta_pleomorpha_str._Grapes 1
Spirochaeta_caldaria_DSM_7334 2
Treponema_azotonutricium_ZAS-9 3
Treponema_primitia_ZAS-2 0
Treponema_brennaborense_DSM_12168 0
Treponema_paraluiscuniculi_Cuniculi_A 2
Treponema_succinifaciens_DSM_2489 0
Treponema_pallidum_subsp._pallidum_SS14 4
Treponema_denticola_ATCC_35405 2
Spirochaeta_africana_DSM_8902 2
Spirochaeta_thermophila_DSM_6192 2
Calditerrivibrio_nitroreducens_DSM_19672 1
Denitrovibrio_acetiphilus_DSM_12809 1
Deferribacter_desulfuricans_SSM1 1
Flexistipes_sinusarabici_DSM_4947 0
Thermovibrio_ammonificans_HB-1 0
Sulfurihydrogenibium_azorense_Az-Fu1 0
Persephonella_marina_EX-H1 0
Hydrogenobaculum_sp._SN 1
Hydrogenobaculum_sp._HO 1
Hydrogenobaculum_sp._Y04AAS1 0
Thermocrinis_albus_DSM_14484 1
Hydrogenobacter_thermophilus_TK-6 0
Dictyoglomus_turgidum_DSM_6724 1
Dictyoglomus_thermophilum_H-6-12 1
Candidatus_Chloracidobacterium_thermophilum_B 2
Candidatus_Solibacter_usitatus_Ellin6076 7
Granulicella_tundricola_MP5ACTX9 1
Granulicella_mallensis_MP5ACTX8 2
Candidatus_Koribacter_versatilis_Ellin345 4
Terriglobus_saanensis_SP1PR4 2
Terriglobus_roseus_DSM_18391 2
Acidobacterium_capsulatum_ATCC_51196 2
Candidatus_Methylomirabilis_oxyfera 0
Acidithiobacillus_ferrivorans_SS3 0
Bacteriovorax_marinus_SJ 0
Bdellovibrio_bacteriovorus_HD100 1
Nautilia_profundicola_AmH 1
Sulfurospirillum_barnesii_SES-3 1
Campylobacter_lari_RM2100 0
Campylobacter_curvus_525.92 1
Campylobacter_concisus_13826 1
Campylobacter_jejuni_subsp._doylei_269.97 1
Campylobacter_sp._03-427 1
Campylobacter_fetus_subsp._fetus_82-40 1
uncultured_Sulfuricurvum_sp._RIFRC-1 1
Sulfuricurvum_kujiense_DSM_16994 1
Sulfurimonas_autotrophica_DSM_16294 0
Wolinella_succinogenes_DSM_1740 0
Helicobacter_cetorum_MIT_00-7128 1
Helicobacter_felis_ATCC_49179 1
Helicobacter_cinaedi_PAGU611 1
Helicobacter_acinonychis_str._Sheeba 0
Helicobacter_pylori_B38 0
Desulfarculus_baarsii_DSM_2075 0
Desulfobacca_acetoxidans_DSM_11109 1
Syntrophus_aciditrophicus_SB 1
Desulfomonile_tiedjei_DSM_6799 3
Syntrophobacter_fumaroxidans_MPOB 2
Desulfurivibrio_alkaliphilus_AHT2 2
Desulfobulbus_propionicus_DSM_2032 1
Desulfatibacillum_alkenivorans_AK-01 6
Desulfobacterium_autotrophicum_HRM2 1
Desulfococcus_oleovorans_Hxd3 5
Desulfomicrobium_baculatum_DSM_4028 1
Desulfovibrio_piezophilus 0
Desulfovibrio_aespoeensis_Aspo-2 2
Lawsonia_intracellularis_PHE/MN1-00 0
Desulfovibrio_magneticus_RS-1 1
Desulfovibrio_alaskensis_G20 0
Desulfovibrio_salexigens_DSM_2638 1
Desulfovibrio_desulfuricans_subsp._desulfuricans_str._ATCC_27774 0
Hippea_maritima_DSM_10411 1
Geobacter_daltonii_FRC-32 1
Geobacter_sp._M21 1
Geobacter_uraniireducens_Rf4 0
Geobacter_lovleyi_SZ 2
Geobacter_bemidjiensis_Bem 1
Geobacter_metallireducens_GS-15 0
Pelobacter_carbinolicus_DSM_2380 2
Haliangium_ochraceum_DSM_14365 3
Sorangium_cellulosum_'So_ce_56' 2
Anaeromyxobacter_sp._Fw109-5 0
Anaeromyxobacter_dehalogenans_2CP-1 0
Stigmatella_aurantiaca_DW4/3-1 3
Corallococcus_coralloides_DSM_2259 2
Myxococcus_xanthus_DK_1622 3
Myxococcus_fulvus_HW-1 1
Thauera_sp._MZ1T 1
Azoarcus_sp._KH32C 1
Azoarcus_sp._BH72 2
Aromatoleum_aromaticum_EbN1 2
Pseudogulbenkiania_sp._NH8B 1
Chromobacterium_violaceum_ATCC_12472 1
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 2
Methylibium_petroleiphilum_PM1 1
Thiomonas_arsenitoxydans 0
Thiomonas_intermedia_K12 1
Rubrivivax_gelatinosus_IL144 1
Leptothrix_cholodnii_SP-6 1
Burkholderia_rhizoxinica_HKI_454 1
Burkholderia_phytofirmans_PsJN 1
Burkholderia_phymatum_STM815 1
Burkholderia_xenovorans_LB400 1
Ralstonia_eutropha_JMP134 0
Cupriavidus_metallidurans_CH34 0
Cupriavidus_necator_N-1 0
Ralstonia_eutropha_H16 1
Ralstonia_pickettii_12D 0
Ralstonia_solanacearum_CFBP2957 1
Polynucleobacter_necessarius_subsp._asymbioticus_QLW-P1DMWA-1 0
Burkholderia_sp._RPE64 2
Burkholderia_sp._CCGE1002 1
Burkholderia_thailandensis_E264 0
Burkholderia_pseudomallei_1106a 1
Burkholderia_mallei_SAVP1 0
Burkholderia_ambifaria_AMMD 1
Burkholderia_cenocepacia_HI2424 1
Burkholderia_multivorans_ATCC_17616 1
Burkholderia_vietnamiensis_G4 1
Burkholderia_gladioli_BSR3 2
Burkholderia_glumae_BGR1 0
Verminephrobacter_eiseniae_EF01-2 1
Alicycliphilus_denitrificans_K601 1
Ramlibacter_tataouinensis_TTB310 1
Delftia_sp._Cs1-4 1
Delftia_acidovorans_SPH-1 1
Polaromonas_naphthalenivorans_CJ2 0
Variovorax_paradoxus_S110 1
Rhodoferax_ferrireducens_T118 1
Acidovorax_ebreus_TPSY 1
Acidovorax_sp._KKS102 1
Acidovorax_sp._JS42 0
Acidovorax_citrulli_AAC00-1 1
Acidovorax_avenae_subsp._avenae_ATCC_19860 1
Comamonas_testosteroni_CNB-2 0
Herminiimonas_arsenicoxydans 1
Collimonas_fungivorans_Ter331 1
Herbaspirillum_seropedicae_SmR1 1
Pusillimonas_sp._T7-7 0
Bordetella_petrii_DSM_12804 1
Bordetella_avium_197N 0
Bordetella_pertussis_Tohama_I 1
Bordetella_parapertussis_12822 1
Bordetella_bronchiseptica_RB50 1
Achromobacter_xylosoxidans_A8 2
Achromobacter_xylosoxidans 1
Thiobacillus_denitrificans_ATCC_25259 2
Nitrosospira_multiformis_ATCC_25196 2
Nitrosomonas_sp._Is79A3 1
Nitrosomonas_eutropha_C91 1
Nitrosomonas_europaea_ATCC_19718 1
Sideroxydans_lithotrophicus_ES-1 1
Methylotenera_versatilis_301 1
Methylotenera_mobilis_JLW8 1
Magnetococcus_marinus_MC-1 1
Parvularcula_bermudensis_HTCC2503 1
Asticcacaulis_excentricus_CB_48 1
Brevundimonas_subvibrioides_ATCC_15264 2
Caulobacter_crescentus_NA1000 2
Caulobacter_segnis_ATCC_21756 1
Erythrobacter_litoralis_HTCC2594 1
Sphingopyxis_alaskensis_RB2256 1
Novosphingobium_sp._PP1Y 0
Novosphingobium_aromaticivorans_DSM_12444 1
Sphingobium_chlorophenolicum_L-1 1
Sphingomonas_sp._MM-1 1
Sphingomonas_wittichii_RW1 1
Hirschia_baltica_ATCC_49814 0
Hyphomonas_neptunium_ATCC_15444 4
Pseudovibrio_sp._FO-BEG1 0
Jannaschia_sp._CCS1 2
Ruegeria_pomeroyi_DSS-3 1
Ketogulonicigenium_vulgare_Y25 1
Ketogulonigenium_vulgarum_WSH-001 1
Rhodospirillum_photometricum_DSM_122 2
Magnetospirillum_magneticum_AMB-1 0
Rhodospirillum_centenum_SW 0
Azospirillum_lipoferum_4B 1
Azospirillum_sp._B510 1
Azospirillum_brasilense_Sp245 1
Gluconacetobacter_xylinus_NBRC_3288 1
Granulibacter_bethesdensis_CGDNIH1 1
Acidiphilium_multivorum_AIU301 0
Gluconobacter_oxydans_621H 1
alpha_proteobacterium_HIMB5 1
Wolbachia_endosymbiont_of_Culex_quinquefasciatus_Pel 0
Rickettsia_bellii_OSU_85-389 0
Rickettsia_parkeri_str._Portsmouth 0
Starkeya_novella_DSM_506 1
Xanthobacter_autotrophicus_Py2 1
Methylobacterium_sp._4-46 4
Methylobacterium_nodulans_ORS_2060 4
Parvibaculum_lavamentivorans_DS-1 1
Brucella_canis_ATCC_23365 1
Brucella_suis_ATCC_23445 1
Sinorhizobium_fredii_NGR234 1
Sinorhizobium_medicae_WSM419 1
Sinorhizobium_meliloti_AK83 2
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 1
Rhizobium_leguminosarum_bv._viciae_3841 1
Agrobacterium_tumefaciens_str._C58 1
Agrobacterium_radiobacter_K84 1
Agrobacterium_sp._H13-3 1
Agrobacterium_vitis_S4 2
Mesorhizobium_opportunistum_WSM2075 2
Mesorhizobium_loti_MAFF303099 1
Methylocella_silvestris_BL2 1
Beijerinckia_indica_subsp._indica_ATCC_9039 0
Pelagibacterium_halotolerans_B2 1
Rhodomicrobium_vannielii_ATCC_17100 0
Rhodopseudomonas_palustris_BisA53 1
Nitrobacter_winogradskyi_Nb-255 0
Nitrobacter_hamburgensis_X14 0
Bradyrhizobium_japonicum_USDA_110 0
Bradyrhizobium_sp._ORS_278 1
Methylocystis_sp._SC2 0
Saccharophagus_degradans_2-40 1
Teredinibacter_turnerae_T7901 1
Cellvibrio_japonicus_Ueda107 2
Oceanimonas_sp._GK1 0
Tolumonas_auensis_DSM_9187 0
Aeromonas_veronii_B565 0
Aeromonas_salmonicida_subsp._salmonicida_A449 0
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 0
Vibrio_fischeri_MJ11 0
Vibrio_sp._Ex25 0
Vibrio_harveyi_ATCC_BAA-1116 0
Vibrio_splendidus_LGP32 0
Vibrio_anguillarum_775 0
Vibrio_vulnificus_MO6-24/O 0
Vibrio_cholerae_O395 0
Psychromonas_sp._CNPT3 1
Ferrimonas_balearica_DSM_9799 0
Shewanella_sediminis_HAW-EB3 0
Shewanella_denitrificans_OS217 1
Shewanella_baltica_OS185 0
Shewanella_woodyi_ATCC_51908 1
Shewanella_sp._MR-4 0
Shewanella_amazonensis_SB2B 0
Shewanella_violacea_DSS12 0
Shewanella_frigidimarina_NCIMB_400 0
Colwellia_psychrerythraea_34H 0
Pseudoalteromonas_atlantica_T6c 0
Pseudoalteromonas_haloplanktis_TAC125 0
Glaciecola_sp._4H-3-7+YE-5 0
Glaciecola_nitratireducens_FR1064 0
Marinobacter_adhaerens_HP15 1
Marinobacter_sp._BSs20148 1
Marinobacter_hydrocarbonoclasticus_ATCC_49840 1
Alteromonas_sp._SN2 0
Kangiella_koreensis_DSM_16069 1
Hahella_chejuensis_KCTC_2396 1
Alcanivorax_borkumensis_SK2 1
Marinomonas_sp._MWYL1 1
Marinomonas_mediterranea_MMB-1 1
Chromohalobacter_salexigens_DSM_3043 1
Halomonas_elongata_DSM_2581 1
Methylomicrobium_alcaliphilum 2
Rhodanobacter_denitrificans 1
Pseudoxanthomonas_suwonensis_11-1 0
Xylella_fastidiosa_M23 1
Xanthomonas_axonopodis_pv._citri_str._306 1
Xanthomonas_oryzae_pv._oryzae_PXO99A 1
Xanthomonas_campestris_pv._campestris_str._B100 1
Halothiobacillus_neapolitanus_c2 1
Thioalkalivibrio_sulfidophilus_HL-EbGr7 1
Thioalkalivibrio_sp._K90mix 1
Halorhodospira_halophila_SL1 0
Allochromatium_vinosum_DSM_180 1
Thiocystis_violascens_DSM_198 1
Nitrosococcus_watsonii_C-113 1
Nitrosococcus_halophilus_Nc4 0
Nitrosococcus_oceani_ATCC_19707 2
gamma_proteobacterium_HdN1 1
Xenorhabdus_nematophila_ATCC_19061 1
Dickeya_dadantii_Ech703 1
Pectobacterium_sp._SCC3193 0
Pectobacterium_atrosepticum_SCRI1043 0
Pectobacterium_carotovorum_subsp._carotovorum_PC1 1
Erwinia_tasmaniensis_Et1/99 0
Erwinia_pyrifoliae_Ep1/96 0
Klebsiella_oxytoca_E718 1
Klebsiella_variicola_At-22 0
Klebsiella_pneumoniae_NTUH-K2044 1
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 0
Enterobacter_sp._638 0
Enterobacter_asburiae_LF7a 0
Enterobacter_cloacae_subsp._dissolvens_SDM 0
Citrobacter_rodentium_ICC168 0
Citrobacter_koseri_ATCC_BAA-895 1
Pseudomonas_sp._TKP 0
Pseudomonas_entomophila_L48 0
Pseudomonas_syringae_pv._tomato_str._DC3000 0
Pseudomonas_stutzeri_A1501 0
Pseudomonas_fulva_12-X 1
Pseudomonas_putida_F1 1
Pseudomonas_fluorescens_SBW25 0
Pseudomonas_mendocina_ymp 0
Pseudomonas_aeruginosa_UCBPP-PA14 0
Pseudomonas_sp._VLB120 0
Psychrobacter_sp._G 1
Psychrobacter_cryohalolentis_K5 1
Acinetobacter_sp._ADP1 1
Methylophaga_sp._JAM1 1
Cycloclasticus_sp._P1 0
Thiomicrospira_crunogena_XCL-2 1
Thioalkalimicrobium_cyclicum_ALM1 1
Staphylothermus_marinus_F1 0
Metallosphaera_cuprina_Ar-4 1
Methanocella_conradii_HZ254 1
Methanocella_paludicola_SANAE 1
Methanosaeta_harundinacea_6Ac 2
Methanosalsum_zhilinae_DSM_4017 1
Methanosarcina_acetivorans_C2A 0
Methanosarcina_mazei_Go1 1
Methanosarcina_barkeri_str._Fusaro 0
Methanospirillum_hungatei_JF-1 1
Methanocorpusculum_labreanum_Z 0
Methanoplanus_petrolearius_DSM_11571 1
Thermoplasmatales_archaeon_BRNA1 0
Thermoplasma_volcanium_GSS1 0
Thermoplasma_acidophilum_DSM_1728 0
Haloferax_mediterranei_ATCC_33500 0
Methanococcus_aeolicus_Nankai-3 1
Methanococcus_maripaludis_C5 1
Aciduliprofundum_boonei_T469 1

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   20
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   7
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   4
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   4
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   4
Cryptococcus_neoformans_var._grubii_H99_ 1
Cryptococcus_neoformans_B-3501A_ 2
Cryptococcus_neoformans_JEC21_ 3
Paracoccidioides_brasiliensis_Pb01_ 2
Paracoccidioides_brasiliensis_Pb03_ 1
Coccidioides_posadasii_str._Silveira_ 3
Coccidioides_immitis_RMSCC_3703_ 4
Coccidioides_immitis_RMSCC_2394_ 1
Coccidioides_immitis_H538.4_ 3
Ajellomyces_dermatitidis_ER-3_ 0
Histoplasma_capsulatum_H143 0
Histoplasma_capsulatum_H88 0
Histoplasma_capsulatum_G186AR 0
Aspergillus_fumigatus_A1163_ 1
Candida_albicans_WO-1_ 1
Saccharomyces_cerevisiae_UC5 2
Saccharomyces_cerevisiae_PW5 1
Saccharomyces_cerevisiae_FL100 0
Saccharomyces_cerevisiae_CLIB324 0
Saccharomyces_cerevisiae_CBS7960 2
Saccharomyces_cerevisiae_YJM269 2
Saccharomyces_cerevisiae_T7 2
Saccharomyces_cerevisiae_FostersB 2
Saccharomyces_cerevisiae_FostersO 2
Saccharomyces_cerevisiae_VL3 1
Saccharomyces_cerevisiae_Vin13 1
Saccharomyces_cerevisiae_LalvinQA23 1
Saccharomyces_cerevisiae_AWRI796 1
Saccharomyces_cerevisiae_Sigma1278b 1
Saccharomyces_cerevisiae_W303 1
Saccharomyces_cerevisiae_JAY291 1
Saccharomyces_cerevisiae_AWRI1631 1
Saccharomyces_cerevisiae_YPS163 0
Saccharomyces_cerevisiae_T73 1
Saccharomyces_cerevisiae_CLIB215 1
Saccharomyces_cerevisiae_YJM789_ 2
Saccharomyces_cerevisiae_YJM789 2
Saccharomyces_cerevisiae_RM11-1a 2
Saccharomyces_cerevisiae_RM11-1a_ 2
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   2
Schizosaccharomyces_pombe_972h-_ 2
Batrachochytrium_dendrobatidis_JEL423_ 2
Batrachochytrium_dendrobatidis_JAM81_ 3
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   11
Hordeum_vulgare_22   (Domesticated barley)   22
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   10
Trypanosoma_brucei_Lister_427_v4.1 3
Neospora_caninum_Nc-Liverpool_6.2 2
Plasmodium_falciparum_HB3_ 1
Plasmodium_falciparum_Dd2_ 0
Chroococcidiopsis_thermalis_PCC_7203 1
Chamaesiphon_minutus_PCC_6605 1
Synechococcus_sp._JA-2-3B'a(2-13) 1
Synechococcus_sp._PCC_7002 0
Crinalium_epipsammum_PCC_9333 2
Oscillatoria_nigro-viridis_PCC_7112 1
Oscillatoria_acuminata_PCC_6304 1
Arthrospira_platensis_NIES-39 1
Cyanothece_sp._PCC_7822 0
Cyanothece_sp._PCC_7425 1
Cyanothece_sp._PCC_7424 2
Cyanothece_sp._PCC_8801 1
Cyanobacterium_aponinum_PCC_10605 0
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 2
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 0
Stanieria_cyanosphaera_PCC_7437 2
Calothrix_parietina_Calothrix_sp._PCC_6303 2
Cylindrospermum_stagnale_PCC_7417 4
Anabaena_cylindrica_PCC_7122 2
Frankia_sp._EuI1c 0
Frankia_sp._CcI3 0
Nocardiopsis_alba_ATCC_BAA-2165 0
Streptomyces_albus_J1074 0
Streptomyces_rapamycinicus_NRRL_5491 0
Streptomyces_davawensis_JCM_4913 2
Streptomyces_fulvissimus_DSM_40593 0
Streptomyces_venezuelae_ATCC_10712 1
Streptomyces_collinus_Tu_365 2
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 0
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 1
Saccharothrix_espanaensis_DSM_44229 2
Amycolatopsis_mediterranei_RB 1
Amycolatopsis_mediterranei_S699 1
Amycolatopsis_mediterranei_S699 1
Amycolatopsis_orientalis_HCCB10007 1
Actinoplanes_friuliensis_DSM_7358 1
Rhodococcus_pyridinivorans_SB3094 0
Nocardia_brasiliensis_ATCC_700358 1
Mycobacterium_liflandii_128FXT 0
Mycobacterium_sp._KMS 0
Mycobacterium_sp._MCS 0
Mycobacterium_canettii_CIPT_140070017 0
Mycobacterium_canettii_CIPT_140060008 0
Mycobacterium_canettii_CIPT_140070008 0
Mycobacterium_canettii_CIPT_140070010 0
Mycobacterium_tuberculosis_EAI5/NITR206 0
Mycobacterium_tuberculosis_EAI5 0
Mycobacterium_tuberculosis_str._Beijing/NITR203 0
Mycobacterium_tuberculosis_UT205 0
Mycobacterium_tuberculosis_CTRI-2 0
Mycobacterium_tuberculosis_str._Erdman_=_ATCC_35801 0
Mycobacterium_tuberculosis_KZN_605 0
Mycobacterium_tuberculosis_KZN_4207 0
Mycobacterium_tuberculosis_CCDC5180 0
Mycobacterium_tuberculosis_CCDC5079 0
Mycobacterium_tuberculosis_CCDC5079 0
Mycobacterium_tuberculosis_H37Ra 0
Mycobacterium_tuberculosis_str._Haarlem 0
Mycobacterium_tuberculosis_H37Rv 0
Mycobacterium_tuberculosis_CDC1551 0
Mycobacterium_bovis_AF2122/97 0
Mycobacterium_bovis_BCG_str._Korea_1168P 0
Mycobacterium_bovis_BCG_str._Mexico 0
Mycobacterium_bovis_BCG_str._Tokyo_172 0
Mycobacterium_gilvum_Spyr1 0
Mycobacterium_smegmatis_str._MC2_155 0
Bifidobacterium_asteroides_PRL2011 0
Actinomyces_viscosus_C505 1
Chthonomonas_calidirosea_T49 1
Deinococcus_peraridilitoris_DSM_19664 1
Thermus_oshimai_JL-2 0
Thermus_thermophilus_HB8 0
[Clostridium]_stercorarium_Clostridiu_subsp._stercorarium_DSM_8532 1
Sulfobacillus_acidophilus_TPY 1
Desulfitobacterium_dichloroeliminans_LMG_P-21439 0
Candidatus_Arthromitus_sp._SFB-mouse-Yit 1
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 0
Halobacteroides_halobius_DSM_5150 0
Paenibacillus_sp._Y412MC10 0
Paenibacillus_mucilaginosus_K02 0
Paenibacillus_polymyxa_CR1 0
Geobacillus_sp._C56-T3 0
Geobacillus_sp._Y4.1MC1 0
Geobacillus_sp._Y412MC52 0
Geobacillus_sp._Y412MC61 0
Bacillus_thuringiensis_HD-789 0
Bacillus_thuringiensis_MC28 0
Bacillus_thuringiensis_serovar_chinensis_CT-43 0
Bacillus_thuringiensis_Bt407 0
Bacillus_thuringiensis_serovar_konkukian_str._97-27 0
Bacillus_thuringiensis_BMB171 0
Bacillus_thuringiensis_serovar_finitimus_YBT-020 0
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 0
Bacillus_cereus_FRI-35 0
Bacillus_cereus_biovar_anthracis_str._CI 0
Bacillus_cereus_AH820 0
Bacillus_cereus_AH187 0
Bacillus_cereus_G9842 0
Bacillus_cereus_Q1 0
Bacillus_cereus_F837/76 0
Bacillus_cereus_E33L 0
Bacillus_cereus_ATCC_10987 0
Bacillus_megaterium_WSH-002 0
Chlorobium_phaeobacteroides_BS1 0
Salinibacter_ruber_DSM_13855 1
Echinicola_vietnamensis_DSM_17526 0
Emticicia_oligotrophica_DSM_17448 5
Prevotella_sp._oral_taxon_299_str._F0039 1
Prevotella_dentalis_DSM_3688 1
Porphyromonas_gingivalis_TDC60 0
Porphyromonas_gingivalis_W83 1
Alistipes_shahii_WAL_8301 1
Bacteroides_xylanisolvens_XB1A 0
Bacteroides_fragilis_638R 0
Bacteroides_fragilis_NCTC_9343 0
Nonlabens_dokdonensis_DSW-6 3
Riemerella_anatipestifer_RA-CH-2 0
Riemerella_anatipestifer_RA-CH-1 0
Riemerella_anatipestifer_RA-GD 0
Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 0
Fibrobacter_succinogenes_subsp._succinogenes_S85 0
Chlamydophila_pneumoniae_LPCoLN 1
Chlamydophila_pneumoniae_J138 0
Chlamydophila_pneumoniae_CWL029 0
Chlamydophila_pneumoniae_AR39 0
Chlamydia_psittaci_01DC12 1
Chlamydia_psittaci_WC 1
Chlamydia_psittaci_WS/RT/E30 1
Chlamydia_psittaci_VS225 1
Chlamydia_psittaci_MN 1
Chlamydia_psittaci_GR9 1
Chlamydia_psittaci_84/55 1
Chlamydia_psittaci_08DC60 1
Chlamydia_psittaci_02DC15 1
Chlamydia_psittaci_C19/98 1
Chlamydia_psittaci_NJ1 1
Chlamydia_psittaci_CP3 1
Chlamydophila_psittaci_RD1 1
Chlamydia_psittaci_Mat116 1
Chlamydophila_psittaci_6BC 1
Chlamydophila_psittaci_6BC 1
Singulisphaera_acidiphila_DSM_18658 2
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 0
Leptospira_interrogans_serovar_Lai_str._56601 0
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 0
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 0
Brachyspira_pilosicoli_WesB 1
Brachyspira_pilosicoli_B2904 1
Brachyspira_pilosicoli_P43/6/78 2
Borrelia_garinii_NMJW1 2
Borrelia_garinii_BgVir 2
Borrelia_afzelii_HLJ01 2
Borrelia_afzelii_PKo 2
Borrelia_burgdorferi_CA382 2
Borrelia_burgdorferi_JD1 1
Borrelia_burgdorferi_N40 1
Borrelia_burgdorferi_ZS7 2
Borrelia_miyamotoi_LB-2001 2
Treponema_pedis_str._T_A4 1
Treponema_pallidum_str._Fribourg-Blanc 3
Treponema_pallidum_subsp._pertenue_str._Gauthier 3
Treponema_pallidum_subsp._pertenue_str._CDC2 3
Treponema_pallidum_subsp._pertenue_str._SamoaD 3
Treponema_pallidum_subsp._pallidum_str._Mexico_A 2
Treponema_pallidum_subsp._pallidum_str._Chicago 1
Treponema_pallidum_subsp._pallidum_DAL-1 2
Treponema_pallidum_subsp._pallidum_str._Nichols 2
Spirochaeta_thermophila_DSM_6578 3
Hydrogenobacter_thermophilus_TK-6 0
Bdellovibrio_exovorus_JSS 0
Bdellovibrio_bacteriovorus_str._Tiberius 0
Campylobacter_jejuni_Waterborne_C.jejuni_Outbreak 1
Campylobacter_jejuni_RM1221 1
Campylobacter_jejuni_subsp._jejuni_00-2544 1
Campylobacter_jejuni_subsp._jejuni_00-2538 1
Campylobacter_jejuni_subsp._jejuni_00-2426 1
Campylobacter_jejuni_subsp._jejuni_00-2425 1
Campylobacter_jejuni_subsp._jejuni_PT14 1
Campylobacter_jejuni_subsp._jejuni_ICDCCJ07001 0
Campylobacter_jejuni_subsp._jejuni_S3 1
Campylobacter_jejuni_subsp._jejuni_M1 1
Campylobacter_jejuni_subsp._jejuni_IA3902 1
Campylobacter_jejuni_subsp._jejuni_81116 1
Campylobacter_jejuni_subsp._jejuni_81-176 1
Campylobacter_jejuni_subsp._jejuni_NCTC_11168-BN148 1
Campylobacter_jejuni_subsp._jejuni_NCTC_11168_=_ATCC_700819 1
Campylobacter_coli_76339 0
Campylobacter_coli_15-537360 0
Campylobacter_coli_CVM_N29710 0
Helicobacter_cetorum_MIT_99-5656 1
Helicobacter_pylori_BM012S 1
Helicobacter_pylori_BM012A 1
Helicobacter_pylori_SouthAfrica20 0
Helicobacter_pylori_UM298 0
Helicobacter_pylori_UM066 0
Helicobacter_pylori_UM037 0
Helicobacter_pylori_UM299 0
Helicobacter_pylori_UM032 0
Helicobacter_pylori_OK310 0
Helicobacter_pylori_OK113 0
Helicobacter_pylori_Rif2 0
Helicobacter_pylori_Rif1 0
Helicobacter_pylori_HUP-B14 0
Helicobacter_pylori_PeCan18 0
Helicobacter_pylori_Shi169 0
Helicobacter_pylori_Shi112 1
Helicobacter_pylori_Shi417 1
Helicobacter_pylori_XZ274 0
Helicobacter_pylori_Aklavik86 0
Helicobacter_pylori_Aklavik117 1
Helicobacter_pylori_SNT49 0
Helicobacter_pylori_Puno135 1
Helicobacter_pylori_Puno120 1
Helicobacter_pylori_ELS37 1
Helicobacter_pylori_Gambia94/24 0
Helicobacter_pylori_SouthAfrica7 0
Helicobacter_pylori_India7 0
Helicobacter_pylori_Lithuania75 0
Helicobacter_pylori_2017 1
Helicobacter_pylori_2018 1
Helicobacter_pylori_908 1
Helicobacter_pylori_F57 1
Helicobacter_pylori_F30 1
Helicobacter_pylori_F16 1
Helicobacter_pylori_Sat464 2
Helicobacter_pylori_Cuz20 0
Helicobacter_pylori_PeCan4 1
Helicobacter_pylori_SJM180 2
Helicobacter_pylori_B8 1
Helicobacter_pylori_52 1
Helicobacter_pylori_v225d 2
Helicobacter_pylori_83 2
Helicobacter_pylori_35A 2
Helicobacter_pylori_P12 1
Helicobacter_pylori_G27 0
Helicobacter_pylori_Shi470 1
Helicobacter_pylori_HPAG1 0
Helicobacter_pylori_F32 0
Helicobacter_pylori_J99 1
Helicobacter_pylori_26695 0
Helicobacter_pylori_26695 0
Lawsonia_intracellularis_N343 0
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 0
Desulfovibrio_desulfuricans_ND132 0
Geobacter_sp._M18 1
Sorangium_cellulosum_So0157-2 2
Anaeromyxobacter_sp._K 0
Anaeromyxobacter_dehalogenans_2CP-C 0
Myxococcus_stipitatus_DSM_14675 1
Burkholderia_phenoliruptrix_BR3459a 1
Pandoraea_pnomenusa_3kgm 0
Ralstonia_pickettii_12J 0
Ralstonia_solanacearum_FQY_4 0
Ralstonia_solanacearum_Po82 0
Ralstonia_solanacearum_PSI07 0
Ralstonia_solanacearum_CMR15 0
Ralstonia_solanacearum_GMI1000 0
Burkholderia_sp._YI23 0
Burkholderia_sp._CCGE1003 1
Burkholderia_sp._CCGE1001 1
Burkholderia_sp._KJ006 1
Burkholderia_thailandensis_MSMB121 0
Burkholderia_pseudomallei_MSHR305 0
Burkholderia_pseudomallei_NCTC_13179 1
Burkholderia_pseudomallei_BPC006 2
Burkholderia_pseudomallei_1026b 2
Burkholderia_pseudomallei_MSHR346 0
Burkholderia_pseudomallei_668 0
Burkholderia_pseudomallei_1710b 1
Burkholderia_pseudomallei_K96243 1
Burkholderia_mallei_NCTC_10229 0
Burkholderia_mallei_NCTC_10247 0
Burkholderia_mallei_ATCC_23344 0
Burkholderia_lata 2
Burkholderia_ambifaria_MC40-6 1
Burkholderia_cenocepacia_MC0-3 1
Burkholderia_cenocepacia_AU_1054 1
Burkholderia_cenocepacia_J2315 1
Burkholderia_multivorans_ATCC_17616 1
Burkholderia_cepacia_GG4 1
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 0
Alicycliphilus_denitrificans_BC 1
Variovorax_paradoxus_B4 1
Variovorax_paradoxus_EPS 1
Bordetella_pertussis_CS 1
Bordetella_parapertussis_18323 1
Bordetella_parapertussis_Bpp5 1
Bordetella_bronchiseptica_MO149 1
Bordetella_bronchiseptica_253 1
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 1
Nitrosomonas_sp._AL212 2
Caulobacter_crescentus_CB15 2
Zymomonas_mobilis_subsp._mobilis_ATCC_29191 1
Zymomonas_mobilis_subsp._mobilis_CP4 0
Zymomonas_mobilis_subsp._mobilis_ATCC_10988 0
Zymomonas_mobilis_subsp._mobilis_ZM4 0
Zymomonas_mobilis_subsp._pomaceae_ATCC_29192 1
Octadecabacter_antarcticus_307 1
Rhodobacter_sphaeroides_KD131 1
Gluconobacter_oxydans_H24 1
Rickettsia_bellii_RML369-C 2
Brucella_canis_HSK_A52141 1
Brucella_melitensis_NI 1
Sinorhizobium_fredii_USDA_257 3
Sinorhizobium_fredii_HH103 1
Sinorhizobium_meliloti_2011 1
Sinorhizobium_meliloti_GR4 2
Sinorhizobium_meliloti_Rm41 2
Sinorhizobium_meliloti_SM11 1
Sinorhizobium_meliloti_BL225C 2
Sinorhizobium_meliloti_1021 1
Rhizobium_etli_CFN_42 0
Rhizobium_etli_bv._mimosae_str._Mim1 0
Rhizobium_tropici_CIAT_899 1
Rhizobium_leguminosarum_bv._trifolii_WSM2304 1
Rhizobium_leguminosarum_bv._trifolii_WSM1325 1
Liberibacter_crescens_BT-1 2
Mesorhizobium_australicum_WSM2073 1
Rhodopseudomonas_palustris_DX-1 1
Rhodopseudomonas_palustris_TIE-1 2
Rhodopseudomonas_palustris_BisB18 1
Rhodopseudomonas_palustris_CGA009 1
Bradyrhizobium_sp._S23321 0
Bradyrhizobium_sp._BTAi1 1
Bradyrhizobium_oligotrophicum_S58 0
Bradyrhizobium_japonicum_USDA_6 2
Simiduia_agarivorans_SA1_=_DSM_21679 0
Aeromonas_hydrophila_ML09-119 0
Vibrio_fischeri_ES114 0
Vibrio_alginolyticus_NBRC_15630_=_ATCC_17749 0
Vibrio_anguillarum_Listonella_anguillarum_M3 0
Vibrio_nigripulchritudo_VibrioScope 0
Vibrio_cholerae_LMA3984-4 0
Vibrio_cholerae_M66-2 0
Vibrio_cholerae_O395 0
Vibrio_cholerae_IEC224 0
Vibrio_cholerae_O1_str._2010EL-1786 0
Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 0
Shewanella_sp._ANA-3 0
Shewanella_baltica_BA175 0
Shewanella_baltica_OS678 0
Shewanella_baltica_OS223 0
Shewanella_baltica_OS195 0
Shewanella_sp._MR-7 0
Glaciecola_psychrophila_170 0
Alteromonas_macleodii_str._'English_Channel_673' 0
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 1
Alcanivorax_dieselolei_B5 0
Thalassolituus_oleivorans_MIL-1 0
Stenotrophomonas_maltophilia_D457 1
Stenotrophomonas_maltophilia_JV3 1
Stenotrophomonas_maltophilia_R551-3 1
Xylella_fastidiosa_subsp._fastidiosa_GB514 1
Xylella_fastidiosa_M12 1
Xylella_fastidiosa_Temecula1 1
Xylella_fastidiosa_9a5c 1
Xanthomonas_citri_subsp._citri_Aw12879 1
Xanthomonas_campestris_pv._vesicatoria_str._85-10 1
Xanthomonas_axonopodis_pv._citrumelo_F1 1
Xanthomonas_axonopodis_Xac29-1 1
Xanthomonas_oryzae_pv._oryzicola_BLS256 1
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 1
Xanthomonas_oryzae_pv._oryzae_KACC_10331 1
Xanthomonas_campestris_pv._raphani_756C 1
Xanthomonas_campestris_pv._campestris_str._8004 1
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 1
Thioalkalivibrio_nitratireducens_DSM_14787 1
Thioflavicoccus_mobilis_8321 1
Rahnella_aquatilis_HX2 0
Serratia_marcescens_WW4 0
Serratia_liquefaciens_ATCC_27592 0
Dickeya_dadantii_Ech586 1
Dickeya_dadantii_3937 2
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 0
Erwinia_pyrifoliae_DSM_12163 0
Cronobacter_sakazakii_CMCC_45402 0
Raoultella_ornithinolytica_B6 0
Shigella_sonnei_53G 0
Shigella_dysenteriae_1617 1
Shigella_boydii_Sb227 0
Salmonella_enterica_subsp._enterica_serovar_Agona_str._24249 1
Salmonella_enterica_subsp._enterica_serovar_Agona_str._SL483 1
Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 0
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 0
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 0
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._RKS5078 0
Klebsiella_oxytoca_KCTC_1686 1
Klebsiella_pneumoniae_JM45 1
Klebsiella_pneumoniae_CG43 1
Klebsiella_pneumoniae_KCTC_2242 1
Klebsiella_pneumoniae_subsp._pneumoniae_1084 1
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 1
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 1
Klebsiella_pneumoniae_subsp._rhinoscleromatis_SB3432 0
Escherichia_coli_E24377A 0
Escherichia_coli_E._coli_PMV-1 0
Escherichia_coli_JJ1886 0
Escherichia_coli_LY180 0
Escherichia_coli_APEC_O78 0
Escherichia_coli_O7:K1_str._CE10 0
Escherichia_coli_O104:H4_str._2009EL-2050 0
Escherichia_coli_O104:H4_str._2009EL-2071 0
Escherichia_coli_O104:H4_str._2011C-3493 0
Escherichia_coli_NA114 0
Escherichia_coli_P12b 0
Escherichia_coli_str._'clone_D_i2' 0
Escherichia_coli_str._'clone_D_i14' 0
Escherichia_coli_UM146 0
Escherichia_coli_042 0
Escherichia_coli_Xuzhou21 0
Escherichia_coli_IHE3034 0
Escherichia_coli_UMNK88 0
Escherichia_coli_O83:H1_str._NRG_857C 0
Escherichia_coli_ABU_83972 0
Escherichia_coli_KO11FL 0
Escherichia_coli_KO11FL 0
Escherichia_coli_LF82 0
Escherichia_coli_ED1a 0
Escherichia_coli_IAI39 0
Escherichia_coli_UMN026 0
Escherichia_coli_55989 0
Escherichia_coli_S88 0
Escherichia_coli_IAI1 0
Escherichia_coli_W 0
Escherichia_coli_W 0
Escherichia_coli_DH1 0
Escherichia_coli_DH1 0
Escherichia_coli_ATCC_8739 0
Escherichia_coli_BL21(DE3) 0
Escherichia_coli_BL21(DE3) 0
Escherichia_coli_SMS-3-5 0
Escherichia_coli_SE15 0
Escherichia_coli_SE11 0
Escherichia_coli_APEC_O1 0
Escherichia_coli_O103:H2_str._12009 0
Escherichia_coli_UTI89 0
Escherichia_coli_536 0
Escherichia_coli_HS 0
Escherichia_coli_ETEC_H10407 0
Escherichia_coli_O55:H7_str._RM12579 0
Escherichia_coli_O55:H7_str._CB9615 0
Escherichia_coli_O26:H11_str._11368 0
Escherichia_coli_CFT073 0
Escherichia_coli_O127:H6_str._E2348/69 0
Escherichia_coli_O157:H7_str._TW14359 0
Escherichia_coli_O157:H7_str._EC4115 0
Escherichia_coli_O157:H7_str._Sakai 0
Escherichia_coli_O157:H7_str._EDL933 0
Escherichia_coli_str._K-12_substr._MDS42 0
Escherichia_coli_BW2952 0
Escherichia_coli_str._K-12_substr._MG1655 0
Escherichia_coli_str._K-12_substr._W3110 0
Escherichia_coli_str._K-12_substr._DH10B 0
Escherichia_coli_B_str._REL606 0
Enterobacter_cloacae_SCF1 1
Enterobacter_cloacae_EcWSU1 0
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 0
Pseudomonas_stutzeri_CCUG_29243 0
Pseudomonas_stutzeri_DSM_10701 1
Pseudomonas_stutzeri_DSM_4166 0
Pseudomonas_putida_NBRC_14164 0
Pseudomonas_putida_DOT-T1E 0
Pseudomonas_putida_BIRD-1 1
Pseudomonas_putida_ND6 1
Pseudomonas_putida_KT2440 0
Pseudomonas_mendocina_NK-01 0
Pseudomonas_aeruginosa_SCV20265 0
Pseudomonas_aeruginosa_MTB-1 0
Pseudomonas_aeruginosa_LES431 0
Pseudomonas_aeruginosa_RP73 0
Pseudomonas_aeruginosa_B136-33 0
Pseudomonas_aeruginosa_PA1R 0
Pseudomonas_aeruginosa_PA1 0
Pseudomonas_aeruginosa_DK2 1
Pseudomonas_aeruginosa_NCGM2.S1 0
Pseudomonas_aeruginosa_M18 0
Pseudomonas_aeruginosa_LESB58 0
Pseudomonas_aeruginosa_PA7 0
Pseudomonas_aeruginosa_PAO1 0
Acinetobacter_sp.__SH024 1
Acinetobacter_baumannii_TYTH-1 0
Acinetobacter_baumannii_BJAB0868 0
Acinetobacter_baumannii_BJAB07104 0
Acinetobacter_baumannii_TCDC-AB0715 0
Acinetobacter_baumannii_MDR-TJ 0
Acinetobacter_baumannii_1656-2 0
Acinetobacter_baumannii_MDR-ZJ06 0
Acinetobacter_radioresistens__SH164 1
Acinetobacter_johnsonii__SH046 1
Methylophaga_sp._JAM7 2
Cycloclasticus_zancles_7-ME 0
Methanosarcina_mazei_Tuc01 0
Candidatus_Methanomethylophilus_alvus_Mx1201 0
Natronomonas_moolapensis_8.8.11 0
Methanococcus_maripaludis_C7 1

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   13
Pan_troglodytes_69_2.1.4   (Chimpanzee)   13
Gorilla_gorilla_69_3.1   (Western gorilla)   13
Pongo_abelii_69_2   (Sumatran orangutan)   13
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   11
Macaca_mulatta_69_1   (Rhesus monkey)   10
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   12
Otolemur_garnettii_69_3   (Small-eared galago)   10
Microcebus_murinus_69_1   (Gray mouse lemur)   7
Rattus_norvegicus_69_3.4   (Norway rat)   9
Mus_musculus_69_38   (House mouse)   11
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   8
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   8
Cavia_porcellus_69_3   (Domestic guinea pig)   12
Oryctolagus_cuniculus_69_2   (Rabbit)   12
Ochotona_princeps_69   (American pika)   7
Tupaia_belangeri_69   (Northern tree shrew)   6
Sus_scrofa_69_10.2   (Pig)   6
Bos_taurus_69_3.1   (Cattle)   10
Vicugna_pacos_69_1   (Alpaca)   6
Tursiops_truncatus_69_1   (Bottlenose dolphin)   13
Mustela_putorius_furo_69_1.0   (Domestic ferret)   10
Ailuropoda_melanoleuca_69_1   (Giant panda)   11
Canis_familiaris_69_3.1   (Dog)   12
Felis_catus_69   (Domestic cat)   6
Equus_caballus_69_2   (Horse)   12
Myotis_lucifugus_69_2.0   (Little brown bat)   10
Pteropus_vampyrus_69_1   (Large flying fox)   11
Sorex_araneus_69_1   (European shrew)   8
Erinaceus_europaeus_69   (Western European hedgehog)   6
Procavia_capensis_69_1   (Cape rock hyrax)   8
Loxodonta_africana_69_3   (African savanna elephant)   10
Echinops_telfairi_69   (Small Madagascar hedgehog)   9
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   4
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   7
Macropus_eugenii_69_1.0   (Tammar wallaby)   5
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   11
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   13
Ornithorhynchus_anatinus_69_5   (Platypus)   5
Petromyzon_marinus_69_7.0   (Sea lamprey)   2
Meleagris_gallopavo_69_2   (Turkey)   9
Gallus_gallus_69_2   (Chicken)   11
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   13
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   10
Anolis_carolinensis_69_2.0   (Green anole)   6
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   12
Latimeria_chalumnae_69_1   (Coelacanth)   9
Gadus_morhua_69_1   (Atlantic cod)   9
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   7
Takifugu_rubripes_69_4   (Torafugu)   7
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   7
Oryzias_latipes_69_1   (Japanese medaka)   9
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   13
Oreochromis_niloticus_69_1.0   (Nile tilapia)   12
Danio_rerio_69_9   (Zebrafish)   10
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   4
Ciona_intestinalis_69   (Vase tunicate)   5
Drosophila_melanogaster_69_5   (Fruit fly)   5
Caenorhabditis_elegans_69_215   (Roundworm)   3
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   1
Arabidopsis_thaliana_10   (Thale cress)   17

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   37
Homo_sapiens__(NCBI_version)   (Human)   18
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   10
Loa_loa_v3.3_(Request)   (Eye worm)   4
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   3
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   3
Moniliophthora_perniciosa_FA553__(Genome_survey) 0
Encephalitozoon_intestinalis__(endoparasite) 1
Lotus_japonicus__(Early_assembly) 4
Malus_x_domestica_(Duplicate)   (Apple)   8
Ricinus_communis__(Early_assembly)   (Castor bean)   10
Nicotiana_benthamiana_0.4.4_(Early_draft) 14
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   11
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   11
Phoenix_dactylifera__(Early_draft)   (Date palm)   4
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 0
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 0
NCBI_plasmid_sequences_(Plasmids) 11
Uniprot_2018_03_genome 73355
NCBI_2017_08_genome 23749
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 5
Protein_Data_Bank_(all_PDB_sequenc) 60
TargetDB__(Targets) 82
Protozoadb_2010_08_(Protozoadb) 43
Core_Eukaryotic_Genes_458_(CEGMA) 0
STRING_v9.0.5_(STRING) 920

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.