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Domain combinations for _gap_,48726,48726,48726,_gap_,52200,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

48726 - Immunoglobulin
48726 - Immunoglobulin
48726 - Immunoglobulin
52200 - Toll/Interleukin receptor TIR domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   1
Pongo_abelii_76_2   (Sumatran orangutan)   2
Macaca_mulatta_76_1   (Rhesus monkey)   1
Microcebus_murinus_76_1   (Gray mouse lemur)   1
Mus_musculus_76_38   (House mouse)   2
Vicugna_pacos_76_1   (Alpaca)   1
Tursiops_truncatus_76_1   (Bottlenose dolphin)   1
Pteropus_vampyrus_76_1   (Large flying fox)   2
Erinaceus_europaeus_76   (Western European hedgehog)   1
Loxodonta_africana_76_3   (African savanna elephant)   1
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   1
Meleagris_gallopavo_76_2   (Turkey)   1
Anas_platyrhynchos_76_1.0   (Mallard)   1
Lepisosteus_oculatus_76   (Spotted gar)   1
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   3
Takifugu_rubripes_76_4   (Torafugu)   1
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   3
Poecilia_formosa_76   (Amazon molly)   1
Oreochromis_niloticus_76_1.0   (Nile tilapia)   3
Danio_rerio_76_9   (Zebrafish)   2

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   1

Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   1
Pongo_abelii_69_2   (Sumatran orangutan)   2
Macaca_mulatta_69_1   (Rhesus monkey)   1
Microcebus_murinus_69_1   (Gray mouse lemur)   1
Rattus_norvegicus_69_3.4   (Norway rat)   1
Mus_musculus_69_38   (House mouse)   1
Vicugna_pacos_69_1   (Alpaca)   1
Tursiops_truncatus_69_1   (Bottlenose dolphin)   1
Pteropus_vampyrus_69_1   (Large flying fox)   2
Erinaceus_europaeus_69   (Western European hedgehog)   1
Loxodonta_africana_69_3   (African savanna elephant)   1
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   1
Meleagris_gallopavo_69_2   (Turkey)   1
Gallus_gallus_69_2   (Chicken)   1
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   2
Takifugu_rubripes_69_4   (Torafugu)   1
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   3
Oreochromis_niloticus_69_1.0   (Nile tilapia)   3
Danio_rerio_69_9   (Zebrafish)   1

Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   2
Homo_sapiens__(NCBI_version)   (Human)   1
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   1
TargetDB__(Targets) 4
STRING_v9.0.5_(STRING) 9
Uniprot_2018_03_genome 2645
NCBI_2017_08_genome 493

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