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Domain combinations for _gap_,49265,49265,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

49265 - Fibronectin type III
49265 - Fibronectin type III

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   24
Pan_troglodytes_76_2.1.4   (Chimpanzee)   7
Gorilla_gorilla_76_3.1   (Western gorilla)   8
Pongo_abelii_76_2   (Sumatran orangutan)   8
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   6
Papio_anubis_76   (Olive baboon)   11
Macaca_mulatta_76_1   (Rhesus monkey)   5
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   9
Otolemur_garnettii_76_3   (Small-eared galago)   6
Microcebus_murinus_76_1   (Gray mouse lemur)   5
Rattus_norvegicus_76_5.0   (Norway rat)   5
Mus_musculus_76_38   (House mouse)   9
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   4
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   5
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   7
Cavia_porcellus_76_3   (Domestic guinea pig)   6
Oryctolagus_cuniculus_76_2   (Rabbit)   7
Ochotona_princeps_76   (American pika)   4
Tupaia_belangeri_76   (Northern tree shrew)   5
Sus_scrofa_76_10.2   (Pig)   7
Bos_taurus_76_3.1   (Cattle)   7
Ovis_aries_76_3.1   (Sheep)   9
Vicugna_pacos_76_1   (Alpaca)   5
Tursiops_truncatus_76_1   (Bottlenose dolphin)   4
Mustela_putorius_furo_76_1.0   (Domestic ferret)   7
Ailuropoda_melanoleuca_76_1   (Giant panda)   6
Canis_familiaris_76_3.1   (Dog)   9
Felis_catus_76_6.2   (Domestic cat)   6
Equus_caballus_76_2   (Horse)   6
Myotis_lucifugus_76_2.0   (Little brown bat)   7
Pteropus_vampyrus_76_1   (Large flying fox)   5
Sorex_araneus_76_1   (European shrew)   4
Erinaceus_europaeus_76   (Western European hedgehog)   2
Procavia_capensis_76_1   (Cape rock hyrax)   4
Loxodonta_africana_76_3   (African savanna elephant)   6
Echinops_telfairi_76   (Small Madagascar hedgehog)   2
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   8
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   2
Macropus_eugenii_76_1.0   (Tammar wallaby)   4
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   12
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   13
Ornithorhynchus_anatinus_76_5   (Platypus)   6
Saccoglossus_kowalevskii_v3.0 4
Petromyzon_marinus_76_7.0   (Sea lamprey)   0
Meleagris_gallopavo_76_2   (Turkey)   3
Gallus_gallus_76_4   (Chicken)   6
Anas_platyrhynchos_76_1.0   (Mallard)   6
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   0
Ficedula_albicollis_76_1.0   (Collared flycatcher)   3
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   5
Anolis_carolinensis_76_2.0   (Green anole)   2
Xenopus_laevis_   (African clawed frog)   5
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   3
Latimeria_chalumnae_76_1   (Coelacanth)   0
Lepisosteus_oculatus_76   (Spotted gar)   4
Gadus_morhua_76_1   (Atlantic cod)   1
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   5
Takifugu_rubripes_76_4   (Torafugu)   6
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   3
Oryzias_latipes_76_1   (Japanese medaka)   0
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   2
Poecilia_formosa_76   (Amazon molly)   2
Oreochromis_niloticus_76_1.0   (Nile tilapia)   1
Astyanax_mexicanus_76   (Mexican tetra)   4
Danio_rerio_76_9   (Zebrafish)   0
Oikopleura_dioica 2
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   0
Ciona_intestinalis_76   (Vase tunicate)   0
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   10
Adineta_vaga 1
Octopus_bimaculoides_280 1
Crassostrea_gigas_22   (Pacific oyster)   0
Lottia_gigantea_   (Owl limpet)   1
Helobdella_robusta_ 1
Capitella_sp._I_ 1
Danaus_plexippus_OGS1.0   (Monarch butterfly)   1
Heliconius_melpomene_   (Postman butterfly)   0
Bombyx_mori_   (Domestic silkworm)   0
Nasonia_vitripennis_   (Jewel wasp)   0
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   0
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   0
Linepithema_humile_v1.1   (Argentine ant)   0
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   0
Solenopsis_invicta_v.2.2.3   (Red fire ant)   0
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   0
Atta_cephalotes_v1.1 0
Camponotus_floridanus_v3.3   (Florida carpenter ant)   1
Lucilia_cuprina   (Australian sheep blowfly)   0
Drosophila_grimshawi_1.3 1
Drosophila_willistoni_1.3 0
Drosophila_pseudoobscura_2.13 0
Drosophila_persimilis_1.3 0
Drosophila_suzukii 0
Drosophila_yakuba_1.3 0
Drosophila_simulans_1.3 0
Drosophila_sechellia_1.3 0
Drosophila_melanogaster_76_5   (Fruit fly)   0
Drosophila_erecta_1.3 0
Drosophila_ananassae_1.3 0
Drosophila_virilis_1.2 0
Drosophila_mojavensis_1.3 0
Megaselia_scalaris_22 0
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   0
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   0
Anopheles_darlingi_22   (American malaria mosquito)   0
Anopheles_gambiae_49_3j   (African malaria mosquito)   0
Tribolium_castaneum_3.0   (Red flour beetle)   0
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   0
Acyrthosiphon_pisum_   (Pea aphid)   0
Rhodnius_prolixus_22 0
Daphnia_pulex_   (Common water flea)   0
Strigamia_maritima_22 0
Sarcoptes_scabiei 2
Tetranychus_urticae_   (Two-spotted spider mite)   0
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   2
Pristionchus_pacificus_ 0
Meloidogyne_incognita_   (Southern root-knot nematode)   0
Meloidogyne_hapla_ 0
Onchocerca_volvulus_22 0
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   0
Caenorhabditis_japonica_ 1
Caenorhabditis_brenneri_ 1
Caenorhabditis_remanei_ 0
Caenorhabditis_elegans_76_235   (Roundworm)   0
Caenorhabditis_briggsae_2 1
Trichinella_spiralis_22 0
Hymenolepis_microstoma_ 0
Echinococcus_multilocularis_ 0
Echinococcus_granulosus_ 0
Taenia_solium_   (Pork tapeworm)   0
Schistosoma_mansoni_ 0
Mnemiopsis_leidyi   (Sea walnut)   1
Acropora_digitifera_v1.0 1
Nematostella_vectensis_1.0   (Starlet sea anemone)   0
Hydra_vulgaris 2
Amphimedon_queenslandica 21
Trichoplax_adhaerens_ 0
Proterospongia_sp._ATCC_50818_ 0
Monosiga_brevicollis_ 0
Capsaspora_owczarzaki_ATCC_30864_ 0
Trichophyton_verrucosum_HKI_0517_ 0
Aspergillus_nidulans_FGSC_A4_ 0
Neosartorya_fischeri_NRRL_181_ 0
Spizellomyces_punctatus_DAOM_BR117_ 0
Selaginella_moellendorffii_ 0
Physcomitrella_patens 0
Coccomyxa_subellipsoidea_sp._C-169_v2 0
Chlorella_variabilis_sp._NC64A_ 0
Chlorella_vulgaris_ 0
Volvox_carteri_f._nagariensis_ 1
Volvox_carteri_v199 1
Chlamydomonas_reinhardtii_4.0 0
Micromonas_sp._RCC299_ 0
Thecamonas_trahens_ATCC_50062_ 1
Cyanophora_paradoxa_ 0
Leishmania_mexicana_2.4 0
Leishmania_major_strain_Friedlin_ 0
Leishmania_infantum_JPCM5_2.4 0
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 0
Trypanosoma_cruzi_strain_CL_Brener 0
Trypanosoma_congolense_2.4 0
Trypanosoma_brucei_TREU927_v4.1 0
Ectocarpus_siliculosus 0
Aureococcus_anophagefferens_ 0
Pythium_iwayamai_DAOM_BR242034_22 0
Pythium_arrhenomanes_ATCC_12531_22 0
Pythium_aphanidermatum_DAOM_BR444_22 0
Pythium_irregulare_DAOM_BR486_22 0
Pythium_vexans_DAOM_BR484_22 1
Phytophthora_sojae_1.1 0
Phytophthora_infestans_T30-4_ 2
Phytophthora_capsici_ 0
Perkinsus_marinus_ATCC_50983_ 3
Symbiodinium_minutum_clade_B1_v1.2 0
Guillardia_theta_CCMP2712_v1.0_ 0
Emiliania_huxleyi_CCMP1516_ 2
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 0
Salinispora_tropica_CNB-440 1
Actinoplanes_sp._N902-109 0
Actinoplanes_sp._SE50/110 0
Jonesia_denitrificans_DSM_20603 0
Isoptericola_variabilis_225 0
Xylanimonas_cellulosilytica_DSM_15894 0
Arthrobacter_phenanthrenivorans_Sphe3 1
Arthrobacter_chlorophenolicus_A6 2
Arthrobacter_aurescens_TC1 1
Arthrobacter_sp._FB24 2
Actinomyces_sp._F0330 0
Clostridium_clariflavum_DSM_19732 1
Eubacterium_siraeum 1
Clostridium_thermocellum_ATCC_27405 1
Ruminococcus_bromii 0
Desulfosporosinus_acidiphilus_SJ4 0
Syntrophobotulus_glycolicus_DSM_8271 0
Clostridium_lentocellum_DSM_5427 0
Eubacterium_rectale_ATCC_33656 0
Syntrophothermus_lipocalidus_DSM_12680 1
Clostridium_sp._BNL1100 0
Caldicellulosiruptor_kristjanssonii_177R1B 1
Caldicellulosiruptor_saccharolyticus_DSM_8903 0
Paenibacillus_sp._JDR-2 0
Paenibacillus_terrae_HPL-003 0
Paenibacillus_mucilaginosus_3016 0
Melioribacter_roseus_P3M 1
Chloroherpeton_thalassium_ATCC_35110 1
Niastella_koreensis_GR20-10 0
Salinibacter_ruber_M8 0
Marivirga_tractuosa_DSM_4126 0
Fibrella_aestuarina 0
Leadbetterella_byssophila_DSM_17132 0
Paludibacter_propionicigenes_WB4 0
Alistipes_finegoldii_DSM_17242 1
Bacteroides_helcogenes_P_36-108 1
Zobellia_galactanivorans 1
Flavobacterium_columnare_ATCC_49512 0
Leptospira_interrogans_serovar_Lai_str._IPAV 0
Treponema_azotonutricium_ZAS-9 0
Treponema_brennaborense_DSM_12168 0
Kosmotoga_olearia_TBF_19.5.1 0
Bdellovibrio_bacteriovorus_HD100 0
uncultured_Sulfuricurvum_sp._RIFRC-1 1
Desulfobulbus_propionicus_DSM_2032 1
Geobacter_daltonii_FRC-32 0
Geobacter_uraniireducens_Rf4 0
Geobacter_lovleyi_SZ 0
Geobacter_metallireducens_GS-15 0
Anaeromyxobacter_sp._Fw109-5 0
Leptothrix_cholodnii_SP-6 2
Psychromonas_ingrahamii_37 0
Shewanella_violacea_DSS12 0
Pseudoalteromonas_haloplanktis_TAC125 1
Hahella_chejuensis_KCTC_2396 0
Xanthomonas_axonopodis_pv._citri_str._306 1
Xenorhabdus_bovienii_SS-2004 1
Providencia_stuartii_MRSN_2154 1
Proteus_mirabilis_HI4320 1
Serratia_sp._AS12 1
Serratia_plymuthica_AS9 1
Pseudomonas_syringae_pv._tomato_str._DC3000 2
Nitrosopumilus_maritimus_SCM1 0
Halorhabdus_utahensis_DSM_12940 0

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   4
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   0
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   0
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   0
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   0
Trypanosoma_brucei_Lister_427_v4.1 0
Actinoplanes_friuliensis_DSM_7358 1
Actinomyces_graevenitzii_C83_ 1
Actinomyces_viscosus_C505 1
Eubacterium_siraeum_V10Sc8a 0
Clostridium_thermocellum_DSM_1313 1
[Clostridium]_stercorarium_Clostridiu_subsp._stercorarium_DSM_8532 0
Desulfosporosinus_meridiei_DSM_13257 0
Enterococcus_mundtii_QU_25 0
Thermobacillus_composti_KWC4 0
Paenibacillus_sp._Y412MC10 1
Paenibacillus_mucilaginosus_KNP414 0
Paenibacillus_mucilaginosus_K02 0
Bacillus_cereus_AH187 1
Emticicia_oligotrophica_DSM_17448 0
Bacteroides_fragilis_638R 0
Bacteroides_fragilis_NCTC_9343 0
Singulisphaera_acidiphila_DSM_18658 0
Leptospira_interrogans_serovar_Lai_str._56601 0
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 0
Bdellovibrio_bacteriovorus_str._Tiberius 0
Myxococcus_stipitatus_DSM_14675 0
Shewanella_baltica_BA175 0
Shewanella_baltica_OS678 0
Shewanella_baltica_OS195 0
Stenotrophomonas_maltophilia_D457 1
Xanthomonas_citri_subsp._citri_Aw12879 1
Morganella_morganii_subsp._morganii_KT 2
Serratia_sp._AS13 1
Serratia_plymuthica_4Rx13 1
Candidatus_Nitrosoarchaeum_koreensis_Candidatus_Nitrosopumilus_koreensis_AR1 0
Methanomethylovorans_hollandica_DSM_15978 1
Halovivax_ruber_XH-70 0

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   10
Pan_troglodytes_69_2.1.4   (Chimpanzee)   7
Gorilla_gorilla_69_3.1   (Western gorilla)   6
Pongo_abelii_69_2   (Sumatran orangutan)   8
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   7
Macaca_mulatta_69_1   (Rhesus monkey)   5
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   7
Otolemur_garnettii_69_3   (Small-eared galago)   6
Microcebus_murinus_69_1   (Gray mouse lemur)   5
Rattus_norvegicus_69_3.4   (Norway rat)   3
Mus_musculus_69_38   (House mouse)   8
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   4
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   4
Cavia_porcellus_69_3   (Domestic guinea pig)   6
Oryctolagus_cuniculus_69_2   (Rabbit)   7
Ochotona_princeps_69   (American pika)   4
Tupaia_belangeri_69   (Northern tree shrew)   5
Sus_scrofa_69_10.2   (Pig)   7
Bos_taurus_69_3.1   (Cattle)   6
Vicugna_pacos_69_1   (Alpaca)   5
Tursiops_truncatus_69_1   (Bottlenose dolphin)   4
Mustela_putorius_furo_69_1.0   (Domestic ferret)   7
Ailuropoda_melanoleuca_69_1   (Giant panda)   6
Canis_familiaris_69_3.1   (Dog)   7
Felis_catus_69   (Domestic cat)   3
Equus_caballus_69_2   (Horse)   6
Myotis_lucifugus_69_2.0   (Little brown bat)   7
Pteropus_vampyrus_69_1   (Large flying fox)   5
Sorex_araneus_69_1   (European shrew)   4
Erinaceus_europaeus_69   (Western European hedgehog)   2
Procavia_capensis_69_1   (Cape rock hyrax)   4
Loxodonta_africana_69_3   (African savanna elephant)   5
Echinops_telfairi_69   (Small Madagascar hedgehog)   2
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   3
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   2
Macropus_eugenii_69_1.0   (Tammar wallaby)   4
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   11
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   12
Ornithorhynchus_anatinus_69_5   (Platypus)   5
Petromyzon_marinus_69_7.0   (Sea lamprey)   0
Meleagris_gallopavo_69_2   (Turkey)   3
Gallus_gallus_69_2   (Chicken)   3
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   0
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   5
Anolis_carolinensis_69_2.0   (Green anole)   1
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   2
Latimeria_chalumnae_69_1   (Coelacanth)   0
Gadus_morhua_69_1   (Atlantic cod)   1
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   3
Takifugu_rubripes_69_4   (Torafugu)   4
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   2
Oryzias_latipes_69_1   (Japanese medaka)   0
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   2
Oreochromis_niloticus_69_1.0   (Nile tilapia)   1
Danio_rerio_69_9   (Zebrafish)   0
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   0
Ciona_intestinalis_69   (Vase tunicate)   0
Drosophila_melanogaster_69_5   (Fruit fly)   0
Caenorhabditis_elegans_69_215   (Roundworm)   0

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   20
Homo_sapiens__(NCBI_version)   (Human)   25
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   7
Loa_loa_v3.3_(Request)   (Eye worm)   0
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   1
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   0
NCBI_plasmid_sequences_(Plasmids) 1
STRING_v9.0.5_(STRING) 129
Uniprot_2018_03_genome 13840
NCBI_2017_08_genome 3390
Protozoadb_2010_08_(Protozoadb) 0
TargetDB__(Targets) 1

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