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Domain combinations for _gap_,49373,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

49373 - Invasin/intimin cell-adhesion fragments

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   1
Pan_troglodytes_76_2.1.4   (Chimpanzee)   1
Gorilla_gorilla_76_3.1   (Western gorilla)   2
Pongo_abelii_76_2   (Sumatran orangutan)   1
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   1
Papio_anubis_76   (Olive baboon)   2
Macaca_mulatta_76_1   (Rhesus monkey)   1
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   4
Otolemur_garnettii_76_3   (Small-eared galago)   1
Microcebus_murinus_76_1   (Gray mouse lemur)   1
Rattus_norvegicus_76_5.0   (Norway rat)   1
Mus_musculus_76_38   (House mouse)   2
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   1
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   2
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   1
Cavia_porcellus_76_3   (Domestic guinea pig)   1
Oryctolagus_cuniculus_76_2   (Rabbit)   1
Ochotona_princeps_76   (American pika)   1
Tupaia_belangeri_76   (Northern tree shrew)   1
Sus_scrofa_76_10.2   (Pig)   1
Bos_taurus_76_3.1   (Cattle)   2
Ovis_aries_76_3.1   (Sheep)   1
Vicugna_pacos_76_1   (Alpaca)   0
Tursiops_truncatus_76_1   (Bottlenose dolphin)   1
Mustela_putorius_furo_76_1.0   (Domestic ferret)   1
Ailuropoda_melanoleuca_76_1   (Giant panda)   1
Canis_familiaris_76_3.1   (Dog)   3
Felis_catus_76_6.2   (Domestic cat)   1
Equus_caballus_76_2   (Horse)   3
Myotis_lucifugus_76_2.0   (Little brown bat)   2
Pteropus_vampyrus_76_1   (Large flying fox)   1
Sorex_araneus_76_1   (European shrew)   0
Erinaceus_europaeus_76   (Western European hedgehog)   1
Procavia_capensis_76_1   (Cape rock hyrax)   1
Loxodonta_africana_76_3   (African savanna elephant)   0
Echinops_telfairi_76   (Small Madagascar hedgehog)   1
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   1
Macropus_eugenii_76_1.0   (Tammar wallaby)   1
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   1
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   0
Ornithorhynchus_anatinus_76_5   (Platypus)   2
Saccoglossus_kowalevskii_v3.0 1
Petromyzon_marinus_76_7.0   (Sea lamprey)   1
Meleagris_gallopavo_76_2   (Turkey)   1
Gallus_gallus_76_4   (Chicken)   1
Anas_platyrhynchos_76_1.0   (Mallard)   1
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   4
Ficedula_albicollis_76_1.0   (Collared flycatcher)   1
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   2
Anolis_carolinensis_76_2.0   (Green anole)   0
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   1
Latimeria_chalumnae_76_1   (Coelacanth)   0
Lepisosteus_oculatus_76   (Spotted gar)   2
Gadus_morhua_76_1   (Atlantic cod)   1
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   3
Takifugu_rubripes_76_4   (Torafugu)   0
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   1
Oryzias_latipes_76_1   (Japanese medaka)   0
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   0
Poecilia_formosa_76   (Amazon molly)   0
Oreochromis_niloticus_76_1.0   (Nile tilapia)   2
Astyanax_mexicanus_76   (Mexican tetra)   1
Danio_rerio_76_9   (Zebrafish)   1
Ciona_intestinalis_76   (Vase tunicate)   1
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   1
Adineta_vaga 2
Octopus_bimaculoides_280 1
Crassostrea_gigas_22   (Pacific oyster)   0
Lottia_gigantea_   (Owl limpet)   1
Capitella_sp._I_ 1
Nasonia_vitripennis_   (Jewel wasp)   0
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   1
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   1
Linepithema_humile_v1.1   (Argentine ant)   1
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   1
Solenopsis_invicta_v.2.2.3   (Red fire ant)   1
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   1
Atta_cephalotes_v1.1 1
Camponotus_floridanus_v3.3   (Florida carpenter ant)   1
Lucilia_cuprina   (Australian sheep blowfly)   1
Drosophila_grimshawi_1.3 1
Drosophila_willistoni_1.3 1
Drosophila_pseudoobscura_2.13 1
Drosophila_persimilis_1.3 1
Drosophila_yakuba_1.3 1
Drosophila_simulans_1.3 1
Drosophila_sechellia_1.3 1
Drosophila_melanogaster_76_5   (Fruit fly)   1
Drosophila_erecta_1.3 1
Drosophila_ananassae_1.3 1
Drosophila_virilis_1.2 1
Drosophila_mojavensis_1.3 1
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   1
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   1
Anopheles_darlingi_22   (American malaria mosquito)   1
Anopheles_gambiae_49_3j   (African malaria mosquito)   1
Tribolium_castaneum_3.0   (Red flour beetle)   1
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   1
Acyrthosiphon_pisum_   (Pea aphid)   0
Rhodnius_prolixus_22 2
Daphnia_pulex_   (Common water flea)   2
Strigamia_maritima_22 0
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   1
Pristionchus_pacificus_ 1
Onchocerca_volvulus_22 1
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   1
Caenorhabditis_japonica_ 1
Caenorhabditis_brenneri_ 1
Caenorhabditis_remanei_ 1
Caenorhabditis_elegans_76_235   (Roundworm)   1
Caenorhabditis_briggsae_2 1
Hymenolepis_microstoma_ 1
Echinococcus_multilocularis_ 1
Echinococcus_granulosus_ 1
Acropora_digitifera_v1.0 1
Nematostella_vectensis_1.0   (Starlet sea anemone)   2
Hydra_vulgaris 1
Amphimedon_queenslandica 2
Trichoplax_adhaerens_ 0
Proterospongia_sp._ATCC_50818_ 0
Sphaeroforma_arctica_JP610_ 1
Capsaspora_owczarzaki_ATCC_30864_ 1
Dictyostelium_discoideum 0
Dictyostelium_purpureum_ 0
Entamoeba_dispar_1.2 0
Entamoeba_invadens_1.2 1
Entamoeba_histolytica_1 0
Selaginella_moellendorffii_ 1
Eucalyptus_grandis_v201   (Rose gum)   1
Theobroma_cacao_B97-61/B2_v1   (Cacao)   1
Gossypium_raimondii_v221 1
Citrus_sinensis_v154   (Sweet orange)   5
Thellungiella_halophila_v173 1
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   2
Capsella_rubella_v183 1
Arabidopsis_lyrata_   (Lyrate rockcress)   1
Arabidopsis_thaliana_10   (Thale cress)   1
Medicago_truncatula_   (Barrel medic)   1
Phaseolus_vulgaris_v186   (French bean)   1
Glycine_max_v109   (Soybean)   1
Cucumis_sativus_v122   (Cucumber)   2
Fragaria_vesca_   (Wild strawberry)   0
Malus_domestica_v196   (Apple)   1
Prunus_persica_v139   (Peach)   1
Linum_usitatissimum_v200   (Flax)   1
Vitis_vinifera_   (Wine grape)   1
Mimulus_guttatus_v140   (Spotted monkey flower)   5
Solanum_lycopersicum_v.2.3   (Tomato)   0
Solanum_tuberosum_   (Potato)   1
Actinidia_chinensis_Hongyang_ 1
Aquilegia_coerulea_v195 1
Triticum_urartu_22 1
Triticum_aestivum_22   (Bread wheat)   3
Aegilops_tauschii_22 1
Brachypodium_distachyon_   (Stiff brome)   1
Oryza_barthii_22   (African wild rice)   1
Oryza_meridionalis_22 1
Oryza_glumaepatula_22 3
Oryza_punctata_22 1
Oryza_nivara_22 1
Oryza_brachyantha_22   (Malo sina)   1
Setaria_italica_v164   (Foxtail millet)   2
Zea_mays_v181   (Maize)   1
Sorghum_bicolor_   (Sorghum)   1
Musa_balbisiana   (Balbis banana)   1
Musa_acuminata_22   (Wild Malaysian banana)   1
Amborella_trichopoda_22 1
Physcomitrella_patens 1
Thecamonas_trahens_ATCC_50062_ 1
Cyanophora_paradoxa_ 0
Tetrahymena_thermophila_SB210_1_ 1
Naegleria_gruberi_ 1
Trichomonas_vaginalis_ 2
Leptolyngbya_sp._PCC_7376 0
Gloeocapsa_sp._PCC_7428 0
Nostoc_sp._PCC_7107 0
Nostoc_sp._PCC_7524 0
Conexibacter_woesei_DSM_14684 1
Eggerthella_sp._YY7918 0
Slackia_heliotrinireducens_DSM_20476 1
Atopobium_parvulum_DSM_20469 0
Ilumatobacter_coccineus 0
Catenulispora_acidiphila_DSM_44928 1
Streptomyces_sp._SirexAA-E 0
Streptomyces_griseus_subsp._griseus_NBRC_13350 0
Streptomyces_bingchenggensis_BCW-1 0
Streptomyces_violaceusniger_Tu_4113 0
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 1
Pseudonocardia_dioxanivorans_CB1190 1
Amycolatopsis_mediterranei_U32 0
Kribbella_flavida_DSM_17836 1
Nocardioides_sp._JS614 0
Microlunatus_phosphovorus_NM-1 1
Actinoplanes_sp._N902-109 0
Amycolicicoccus_subflavus_DQS3-9A1 1
Beutenbergia_cavernae_DSM_12333 0
Leifsonia_xyli_subsp._xyli_str._CTCB07 1
Microbacterium_testaceum_StLB037 1
Bifidobacterium_longum_subsp._longum_JDM301 1
Bifidobacterium_dentium_Bd1 1
Bifidobacterium_bifidum_S17 0
Dehalococcoides_sp._BAV1 0
Thermomicrobium_roseum_DSM_5159 1
Sphaerobacter_thermophilus_DSM_20745 1
Chloroflexus_sp._MS-G 1
Chloroflexus_sp._Y-400-fl 0
Chloroflexus_aurantiacus_J-10-fl 0
Deinococcus_gobiensis_I-0 0
Deinococcus_radiodurans_R1 1
Marinithermus_hydrothermalis_DSM_14884 1
Meiothermus_silvanus_DSM_9946 1
Anaerococcus_prevotii_DSM_20548 0
Finegoldia_magna_ATCC_29328 1
Erysipelothrix_rhusiopathiae_str._Fujisawa 0
Natranaerobius_thermophilus_JW/NM-WN-LF 0
Symbiobacterium_thermophilum_IAM_14863 3
Clostridium_clariflavum_DSM_19732 0
Clostridium_cellulolyticum_H10 1
Clostridium_thermocellum_ATCC_27405 0
Ethanoligenens_harbinense_YUAN-3 1
Faecalibacterium_prausnitzii 1
Ruminococcus_bromii 1
Sulfobacillus_acidophilus_DSM_10332 0
Oscillibacter_valericigenes_Sjm18-20 2
butyrate-producing_bacterium_SS3/4 0
Desulfosporosinus_acidiphilus_SJ4 2
Desulfosporosinus_orientis_DSM_765 0
Dehalobacter_sp._DCA 1
Dehalobacter_sp._CF 2
Desulfitobacterium_hafniense_Y51 2
Desulfitobacterium_dehalogenans_ATCC_51507 1
Desulfotomaculum_reducens_MI-1 1
Desulfotomaculum_acetoxidans_DSM_771 3
Acetobacterium_woodii_DSM_1030 1
Eubacterium_eligens_ATCC_27750 1
Eubacterium_limosum_KIST612 1
Clostridium_sticklandii_DSM_519 1
Clostridium_phytofermentans_ISDg 1
Coprococcus_sp._ART55/1 0
Roseburia_hominis_A2-183 0
Butyrivibrio_proteoclasticus_B316 0
Butyrivibrio_fibrisolvens 0
Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen 2
Heliobacterium_modesticaldum_Ice1 0
Clostridium_sp._BNL1100 4
Clostridium_ljungdahlii_DSM_13528 2
Clostridium_kluyveri_DSM_555 2
Clostridium_beijerinckii_NCIMB_8052 4
Clostridium_tetani_E88 1
Clostridium_perfringens_ATCC_13124 0
Clostridium_cellulovorans_743B 0
Clostridium_botulinum_A_str._ATCC_3502 1
Clostridium_acetobutylicum_ATCC_824 1
Mahella_australiensis_50-1_BON 0
Caldicellulosiruptor_obsidiansis_OB47 0
Caldicellulosiruptor_hydrothermalis_108 0
Caldicellulosiruptor_owensensis_OL 0
Caldicellulosiruptor_lactoaceticus_6A 0
Caldicellulosiruptor_kristjanssonii_177R1B 0
Coprothermobacter_proteolyticus_DSM_5265 0
Tepidanaerobacter_acetatoxydans_Re1 2
Thermoanaerobacter_tengcongensis_MB4 0
Carboxydothermus_hydrogenoformans_Z-2901 1
Thermoanaerobacter_pseudethanolicus_ATCC_33223 0
Thermoanaerobacter_sp._X514 0
Thermoanaerobacter_wiegelii_Rt8.B1 0
Thermoanaerobacter_brockii_subsp._finnii_Ako-1 0
Halanaerobium_hydrogeniformans 1
Lactobacillus_plantarum_JDM1 2
Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_BAA-365 0
Streptococcus_dysgalactiae_subsp._equisimilis_GGS_124 1
Streptococcus_macedonicus_ACA-DC_198 0
Exiguobacterium_sp._MH3 1
Exiguobacterium_sibiricum_255-15 1
Kyrpidia_tusciae_DSM_2912 0
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 0
Brevibacillus_brevis_NBRC_100599 1
Paenibacillus_sp._JDR-2 0
Paenibacillus_terrae_HPL-003 1
Paenibacillus_mucilaginosus_3016 0
Paenibacillus_polymyxa_M1 1
Bacillus_selenitireducens_MLS10 0
Solibacillus_silvestris_StLB046 1
Geobacillus_thermoglucosidasius_C56-YS93 0
Lysinibacillus_sphaericus_C3-41 2
Anoxybacillus_flavithermus_WK1 0
Geobacillus_thermoleovorans_CCB_US3_UF5 0
Geobacillus_kaustophilus_HTA426 0
Geobacillus_sp._GHH01 0
Geobacillus_sp._WCH70 1
Bacillus_anthracis_str._A0248 1
Bacillus_pseudofirmus_OF4 1
Candidatus_Cloacamonas_acidaminovorans 0
Gemmatimonas_aurantiaca_T-27 4
Melioribacter_roseus_P3M 0
Saprospira_grandis_str._Lewin 1
Niastella_koreensis_GR20-10 0
Chitinophaga_pinensis_DSM_2588 1
Rhodothermus_marinus_DSM_4252 0
Cyclobacterium_marinum_DSM_745 0
Cytophaga_hutchinsonii_ATCC_33406 1
Parabacteroides_distasonis_ATCC_8503 1
Tannerella_forsythia_ATCC_43037 1
Paludibacter_propionicigenes_WB4 0
Bacteroides_sp._CF50 1
Prevotella_denticola_F0289 1
Prevotella_ruminicola_23 1
Pedobacter_saltans_DSM_12145 0
Solitalea_canadensis_DSM_3403 1
Pedobacter_heparinus_DSM_2366 0
Fluviicola_taffensis_DSM_16823 0
Lacinutrix_sp._5H-3-7-4 1
Maribacter_sp._HTCC2170 1
Robiginitalea_biformata_HTCC2501 0
Cellulophaga_lytica_DSM_7489 1
Capnocytophaga_canimorsus_Cc5 1
Flavobacterium_columnare_ATCC_49512 1
Isosphaera_pallida_ATCC_43644 3
Planctomyces_brasiliensis_DSM_5305 2
Rhodopirellula_baltica_SH_1 1
Pirellula_staleyi_DSM_6068 1
Coraliomargarita_akajimensis_DSM_45221 1
Turneriella_parva_DSM_21527 0
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 0
Sphaerochaeta_globus_str._Buddy 0
Treponema_azotonutricium_ZAS-9 0
Treponema_primitia_ZAS-2 1
Treponema_succinifaciens_DSM_2489 0
Spirochaeta_africana_DSM_8902 0
Spirochaeta_thermophila_DSM_6192 1
Desulfurispirillum_indicum_S5 1
Kosmotoga_olearia_TBF_19.5.1 1
Thermosipho_melanesiensis_BI429 0
Thermotoga_sp._RQ2 1
Thermotoga_naphthophila_RKU-10 1
Thermotoga_maritima_MSB8 1
Caldisericum_exile_AZM16c01 0
Candidatus_Solibacter_usitatus_Ellin6076 4
Granulicella_tundricola_MP5ACTX9 0
Granulicella_mallensis_MP5ACTX8 0
Candidatus_Koribacter_versatilis_Ellin345 1
Bacteriovorax_marinus_SJ 1
Sulfurovum_sp._NBC37-1 0
Desulfurivibrio_alkaliphilus_AHT2 0
Desulfatibacillum_alkenivorans_AK-01 0
Geobacter_daltonii_FRC-32 3
Geobacter_sp._M21 1
Geobacter_uraniireducens_Rf4 0
Geobacter_bemidjiensis_Bem 1
Haliangium_ochraceum_DSM_14365 0
Anaeromyxobacter_sp._Fw109-5 1
Anaeromyxobacter_dehalogenans_2CP-1 1
Stigmatella_aurantiaca_DW4/3-1 1
Corallococcus_coralloides_DSM_2259 3
Myxococcus_xanthus_DK_1622 1
Chromobacterium_violaceum_ATCC_12472 1
Rubrivivax_gelatinosus_IL144 0
Burkholderia_thailandensis_E264 1
Burkholderia_pseudomallei_1106a 1
Burkholderia_mallei_SAVP1 1
Delftia_sp._Cs1-4 0
Delftia_acidovorans_SPH-1 1
Variovorax_paradoxus_S110 1
Rhodoferax_ferrireducens_T118 1
Ochrobactrum_anthropi_ATCC_49188 0
Brucella_microti_CCM_4915 1
Brucella_pinnipedialis_B2/94 1
Brucella_canis_ATCC_23365 1
Brucella_suis_ATCC_23445 1
Brucella_ovis_ATCC_25840 1
Brucella_abortus_S19 1
Saccharophagus_degradans_2-40 1
Teredinibacter_turnerae_T7901 1
Cellvibrio_japonicus_Ueda107 1
Tolumonas_auensis_DSM_9187 1
Aeromonas_veronii_B565 0
Vibrio_parahaemolyticus_RIMD_2210633 1
Photobacterium_profundum_SS9 1
Psychromonas_ingrahamii_37 0
Psychromonas_sp._CNPT3 2
Ferrimonas_balearica_DSM_9799 1
Shewanella_piezotolerans_WP3 0
Shewanella_loihica_PV-4 0
Shewanella_halifaxensis_HAW-EB4 0
Shewanella_sediminis_HAW-EB3 0
Shewanella_denitrificans_OS217 0
Shewanella_pealeana_ATCC_700345 2
Shewanella_oneidensis_MR-1 0
Shewanella_baltica_OS185 3
Shewanella_woodyi_ATCC_51908 0
Shewanella_sp._MR-4 0
Shewanella_amazonensis_SB2B 0
Shewanella_violacea_DSS12 1
Shewanella_frigidimarina_NCIMB_400 0
Shewanella_putrefaciens_CN-32 0
Colwellia_psychrerythraea_34H 1
Pseudoalteromonas_sp._SM9913 0
Pseudoalteromonas_atlantica_T6c 2
Pseudoalteromonas_haloplanktis_TAC125 0
Glaciecola_sp._4H-3-7+YE-5 1
Glaciecola_nitratireducens_FR1064 0
Hahella_chejuensis_KCTC_2396 0
Alkalilimnicola_ehrlichii_MLHE-1 1
Halorhodospira_halophila_SL1 1
gamma_proteobacterium_HdN1 1
Photorhabdus_asymbiotica 1
Photorhabdus_luminescens_subsp._laumondii_TTO1 1
Xenorhabdus_bovienii_SS-2004 3
Xenorhabdus_nematophila_ATCC_19061 2
Edwardsiella_tarda_EIB202 1
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 1
Escherichia_fergusonii_ATCC_35469 1
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 0
Pseudomonas_sp._TKP 1
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 1
Pseudomonas_entomophila_L48 1
Pseudomonas_syringae_pv._tomato_str._DC3000 1
Psychrobacter_sp._G 0
Psychrobacter_cryohalolentis_K5 0
Acinetobacter_calcoaceticus_PHEA-2 1
Staphylothermus_hellenicus_DSM_12710 0
Staphylothermus_marinus_F1 0
halophilic_archaeon_DL31 1
Methanocella_arvoryzae_MRE50 1
Methanocella_conradii_HZ254 0
Methanocella_paludicola_SANAE 3
Methanohalobium_evestigatum_Z-7303 0
Methanococcoides_burtonii_DSM_6242 1
Methanoplanus_petrolearius_DSM_11571 0
Methanoculleus_bourgensis_MS2 0
Ferroglobus_placidus_DSM_10642 1
Archaeoglobus_profundus_DSM_5631 0
Archaeoglobus_veneficus_SNP6 3
Archaeoglobus_fulgidus_DSM_4304 2
Thermococcus_sp._4557 1
Thermococcus_gammatolerans_EJ3 1
Pyrococcus_furiosus_COM1 1
Thermoplasma_acidophilum_DSM_1728 0
Salinarchaeum_sp._Harcht-Bsk1 1
Natrinema_sp._J7-2 1
Halorubrum_lacusprofundi_ATCC_49239 1
Haloferax_mediterranei_ATCC_33500 1
Haloferax_volcanii_DS2 2
Halomicrobium_mukohataei_DSM_12286 1
Halorhabdus_utahensis_DSM_12940 0
Haloarcula_hispanica_ATCC_33960 0
Haloarcula_marismortui_ATCC_43049 0
Halalkalicoccus_jeotgali_B3 1
Methanosphaera_stadtmanae_DSM_3091 0
Methanobrevibacter_sp._AbM4 2
Methanobrevibacter_ruminantium_M1 3
Methanobrevibacter_smithii_ATCC_35061 2
Aciduliprofundum_boonei_T469 0
Acholeplasma_laidlawii_PG-8A 0

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   1
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   1
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   1
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   1
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   1
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   1
Hordeum_vulgare_22   (Domesticated barley)   3
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   1
Chroococcidiopsis_thermalis_PCC_7203 1
Crinalium_epipsammum_PCC_9333 0
Oscillatoria_nigro-viridis_PCC_7112 1
Cyanothece_sp._PCC_7822 0
Cyanothece_sp._PCC_7424 0
Calothrix_parietina_Calothrix_sp._PCC_6303 0
Anabaena_cylindrica_PCC_7122 0
Adlercreutzia_equolifaciens_DSM_19450 0
Nocardiopsis_alba_ATCC_BAA-2165 0
Streptomyces_albus_J1074 0
Streptomyces_rapamycinicus_NRRL_5491 0
Streptomyces_fulvissimus_DSM_40593 0
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 1
Amycolatopsis_mediterranei_RB 0
Amycolatopsis_mediterranei_S699 0
Amycolatopsis_mediterranei_S699 0
Amycolatopsis_orientalis_HCCB10007 1
Leifsonia_xyli_subsp._cynodontis_DSM_46306 2
Bifidobacterium_longum_subsp._infantis_157F 1
Bifidobacterium_longum_subsp._longum_BBMN68 2
Bifidobacterium_longum_subsp._longum_F8 2
Bifidobacterium_longum_subsp._longum_JCM_1217 1
Bifidobacterium_thermophilum_RBL67 0
Bifidobacterium_breve_UCC2003 1
Bifidobacterium_bifidum_PRL2010 0
Bifidobacterium_bifidum_BGN4 0
Actinomyces_odontolyticus_ATCC_17982 0
Dehalococcoides_mccartyi_GY50 0
Chthonomonas_calidirosea_T49 1
[Eubacterium]_cylindroides_[Eubacterium]_cylindroides_T2-87 1
Erysipelothrix_rhusiopathiae_SY1027 0
Clostridium_thermocellum_DSM_1313 0
Faecalibacterium_prausnitzii_L2-6 1
Sulfobacillus_acidophilus_TPY 0
Desulfosporosinus_meridiei_DSM_13257 0
Desulfitobacterium_hafniense_DCB-2 2
Desulfotomaculum_gibsoniae_DSM_7213 0
Roseburia_intestinalis_XB6B4 0
Clostridium_sp._SY8519 2
Clostridium_saccharobutylicum_DSM_13864 2
Clostridium_autoethanogenum_DSM_10061 0
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 10
Clostridium_kluyveri_NBRC_12016 2
Clostridium_tetani_genome_12124569 2
Clostridium_pasteurianum_BC1 1
Clostridium_botulinum_H04402_065 1
Clostridium_botulinum_E3_str._Alaska_E43 1
Clostridium_botulinum_B1_str._Okra 1
Clostridium_botulinum_Ba4_str._657 2
Clostridium_botulinum_A2_str._Kyoto 1
Clostridium_botulinum_A_str._Hall 1
Clostridium_botulinum_A_str._ATCC_19397 1
Clostridium_acetobutylicum_DSM_1731 1
Clostridium_acetobutylicum_EA_2018 1
Thermoanaerobacter_sp._X513 0
Carnobacterium_maltaromaticum_LMA28 1
Lactobacillus_plantarum_16 2
Lactobacillus_plantarum_ZJ316 2
Lactobacillus_plantarum_subsp._plantarum_ST-III 2
Lactobacillus_plantarum_subsp._plantarum_P-8 1
Lactobacillus_plantarum_WCFS1 1
Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_11842 0
Lactobacillus_delbrueckii_subsp._bulgaricus_2038 0
Streptococcus_dysgalactiae_subsp._equisimilis_167 1
Streptococcus_dysgalactiae_subsp._equisimilis_AC-2713 1
Streptococcus_dysgalactiae_subsp._equisimilis_ATCC_12394 1
Streptococcus_agalactiae_ILRI112 1
Exiguobacterium_antarcticum_B7 1
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_Tc-4-1 2
Paenibacillus_sp._Y412MC10 3
Paenibacillus_mucilaginosus_KNP414 0
Paenibacillus_mucilaginosus_K02 0
Paenibacillus_polymyxa_CR1 0
Paenibacillus_polymyxa_SC2 1
Paenibacillus_polymyxa_E681 0
Geobacillus_sp._C56-T3 0
Geobacillus_sp._Y4.1MC1 0
Geobacillus_sp._Y412MC52 0
Geobacillus_sp._Y412MC61 0
Bacillus_infantis_NRRL_B-14911 0
Bacillus_cereus_subsp._cytotoxis_NVH_391-98 1
Bacillus_cereus_E33L 1
Bacillus_anthracis_str._H9401 1
Bacillus_anthracis_str._CDC_684 1
Bacillus_anthracis_str._'Ames_Ancestor' 1
Bacillus_anthracis_str._Sterne 1
Bacillus_anthracis_str._Ames 1
Rhodothermus_marinus_SG0.5JP17-172 0
Chlamydia_trachomatis_J/6276tet1 0
Chlamydia_trachomatis_RC-J(s)/122 0
Chlamydia_trachomatis_RC-F(s)/342 0
Chlamydia_trachomatis_RC-Fs852 0
Singulisphaera_acidiphila_DSM_18658 4
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 0
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 0
Spirochaeta_thermophila_DSM_6578 2
Thermotoga_maritima_MSB8 1
Desulfobacula_toluolica_Tol2 1
Geobacter_sp._M18 1
Anaeromyxobacter_sp._K 1
Anaeromyxobacter_dehalogenans_2CP-C 1
Myxococcus_stipitatus_DSM_14675 0
Pandoraea_pnomenusa_3kgm 1
Ralstonia_solanacearum_PSI07 1
Burkholderia_thailandensis_MSMB121 2
Burkholderia_pseudomallei_MSHR305 1
Burkholderia_pseudomallei_NCTC_13179 1
Burkholderia_pseudomallei_BPC006 1
Burkholderia_pseudomallei_1026b 1
Burkholderia_pseudomallei_668 1
Burkholderia_pseudomallei_1710b 1
Burkholderia_pseudomallei_K96243 1
Burkholderia_mallei_NCTC_10229 1
Burkholderia_mallei_NCTC_10247 1
Brucella_ceti_TE10759-12 1
Brucella_ceti_TE28753-12 1
Brucella_canis_HSK_A52141 1
Brucella_suis_VBI22 1
Brucella_suis_1330 1
Brucella_suis_1330 1
Brucella_abortus_A13334 1
Simiduia_agarivorans_SA1_=_DSM_21679 1
Vibrio_parahaemolyticus_BB22OP 1
Vibrio_nigripulchritudo_VibrioScope 1
Shewanella_sp._W3-18-1 0
Shewanella_sp._ANA-3 0
Shewanella_baltica_BA175 4
Shewanella_baltica_OS678 2
Shewanella_baltica_OS117 0
Shewanella_baltica_OS223 3
Shewanella_baltica_OS195 4
Shewanella_baltica_OS155 0
Shewanella_sp._MR-7 0
Shewanella_putrefaciens_200 0
Glaciecola_psychrophila_170 0
Thioalkalivibrio_nitratireducens_DSM_14787 1
Edwardsiella_tarda_FL6-60 1
Cronobacter_sakazakii_SP291 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2 1
Escherichia_coli_E24377A 0
Escherichia_coli_O7:K1_str._CE10 0
Escherichia_coli_042 0
Escherichia_coli_Xuzhou21 0
Escherichia_coli_ED1a 0
Escherichia_coli_IAI39 0
Escherichia_coli_UMN026 0
Escherichia_coli_S88 0
Escherichia_coli_DH1 0
Escherichia_coli_DH1 0
Escherichia_coli_BL21(DE3) 0
Escherichia_coli_BL21(DE3) 0
Escherichia_coli_SMS-3-5 0
Escherichia_coli_O55:H7_str._RM12579 0
Escherichia_coli_O55:H7_str._CB9615 0
Escherichia_coli_O157:H7_str._TW14359 0
Escherichia_coli_O157:H7_str._Sakai 0
Escherichia_coli_O157:H7_str._EDL933 0
Escherichia_coli_str._K-12_substr._MDS42 0
Escherichia_coli_BW2952 0
Escherichia_coli_str._K-12_substr._MG1655 0
Escherichia_coli_str._K-12_substr._W3110 0
Escherichia_coli_str._K-12_substr._DH10B 0
Escherichia_coli_B_str._REL606 0
Pseudomonas_syringae_pv._phaseolicola_1448A 1
Pseudomonas_syringae_pv._syringae_B728a 1
Pseudomonas_fluorescens_F113 1
Pseudomonas_fluorescens_R124 1
Pseudomonas_fluorescens_Pf0-1 1
Acinetobacter_baumannii_ZW85-1 1
Acinetobacter_baumannii_TYTH-1 1
Acinetobacter_baumannii_BJAB0868 1
Acinetobacter_baumannii_BJAB07104 1
Acinetobacter_baumannii_TCDC-AB0715 1
Acinetobacter_baumannii_MDR-TJ 1
Acinetobacter_baumannii_1656-2 1
Acinetobacter_baumannii_MDR-ZJ06 1
Acinetobacter_baumannii_ACICU 1
Acinetobacter_radioresistens__SH164 0
Acinetobacter_junii__SH205 1
Candidatus_Nitrososphaera_gargensis_Ga9.2 1
Methanomethylovorans_hollandica_DSM_15978 1
Methanolobus_psychrophilus_R15 2
Methanoregula_formicica_Methanoregula_formicicum_SMSP 0
Pyrococcus_furiosus_DSM_3638 1
Candidatus_Methanomethylophilus_alvus_Mx1201 1
Candidatus_Methanomassiliicoccus_intestinalis_Issoire-Mx1 1
Natrinema_pellirubrum_DSM_15624 2
Halorhabdus_tiamatea_SARL4B 1
Natronomonas_moolapensis_8.8.11 2
Haloarcula_hispanica_N601 0
Methanobacterium_sp._SWAN-1 0

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   1
Pan_troglodytes_69_2.1.4   (Chimpanzee)   1
Gorilla_gorilla_69_3.1   (Western gorilla)   1
Pongo_abelii_69_2   (Sumatran orangutan)   1
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   1
Macaca_mulatta_69_1   (Rhesus monkey)   1
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   1
Otolemur_garnettii_69_3   (Small-eared galago)   1
Microcebus_murinus_69_1   (Gray mouse lemur)   1
Rattus_norvegicus_69_3.4   (Norway rat)   1
Mus_musculus_69_38   (House mouse)   1
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   1
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   2
Cavia_porcellus_69_3   (Domestic guinea pig)   1
Oryctolagus_cuniculus_69_2   (Rabbit)   1
Ochotona_princeps_69   (American pika)   1
Tupaia_belangeri_69   (Northern tree shrew)   1
Sus_scrofa_69_10.2   (Pig)   1
Bos_taurus_69_3.1   (Cattle)   2
Vicugna_pacos_69_1   (Alpaca)   0
Tursiops_truncatus_69_1   (Bottlenose dolphin)   1
Mustela_putorius_furo_69_1.0   (Domestic ferret)   1
Ailuropoda_melanoleuca_69_1   (Giant panda)   1
Canis_familiaris_69_3.1   (Dog)   1
Felis_catus_69   (Domestic cat)   1
Equus_caballus_69_2   (Horse)   1
Myotis_lucifugus_69_2.0   (Little brown bat)   2
Pteropus_vampyrus_69_1   (Large flying fox)   1
Sorex_araneus_69_1   (European shrew)   0
Erinaceus_europaeus_69   (Western European hedgehog)   1
Procavia_capensis_69_1   (Cape rock hyrax)   1
Loxodonta_africana_69_3   (African savanna elephant)   0
Echinops_telfairi_69   (Small Madagascar hedgehog)   1
Macropus_eugenii_69_1.0   (Tammar wallaby)   1
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   1
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   0
Ornithorhynchus_anatinus_69_5   (Platypus)   2
Petromyzon_marinus_69_7.0   (Sea lamprey)   1
Meleagris_gallopavo_69_2   (Turkey)   1
Gallus_gallus_69_2   (Chicken)   1
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   4
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   1
Anolis_carolinensis_69_2.0   (Green anole)   0
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   1
Latimeria_chalumnae_69_1   (Coelacanth)   0
Gadus_morhua_69_1   (Atlantic cod)   1
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   1
Takifugu_rubripes_69_4   (Torafugu)   0
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   1
Oryzias_latipes_69_1   (Japanese medaka)   0
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   0
Oreochromis_niloticus_69_1.0   (Nile tilapia)   1
Danio_rerio_69_9   (Zebrafish)   1
Ciona_intestinalis_69   (Vase tunicate)   1
Drosophila_melanogaster_69_5   (Fruit fly)   1
Caenorhabditis_elegans_69_215   (Roundworm)   1
Arabidopsis_thaliana_10   (Thale cress)   1

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   1
Homo_sapiens__(NCBI_version)   (Human)   1
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   1
Loa_loa_v3.3_(Request)   (Eye worm)   0
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   1
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   1
Lotus_japonicus__(Early_assembly) 1
Malus_x_domestica_(Duplicate)   (Apple)   1
Ricinus_communis__(Early_assembly)   (Castor bean)   0
Nicotiana_benthamiana_0.4.4_(Early_draft) 0
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   0
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   0
Acholeplasma_laidlawii_PG-8A_(duplicate) 0
NCBI_plasmid_sequences_(Plasmids) 11
UniProt__viral_sequences_(Viral) 1
Protozoadb_2010_08_(Protozoadb) 4
NCBI_viral_sequences_(Viral) 1
Protein_Data_Bank_(all_PDB_sequenc) 2
TargetDB__(Targets) 17
STRING_v9.0.5_(STRING) 215
Uniprot_2018_03_genome 24270
NCBI_2017_08_genome 10892

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