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Domain combinations for _gap_,49384 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

49384 - Carbohydrate-binding domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Ciona_intestinalis_76   (Vase tunicate)   0
Crassostrea_gigas_22   (Pacific oyster)   0
Lottia_gigantea_   (Owl limpet)   0
Helobdella_robusta_ 0
Capitella_sp._I_ 0
Daphnia_pulex_   (Common water flea)   0
Meloidogyne_incognita_   (Southern root-knot nematode)   0
Meloidogyne_hapla_ 1
Mnemiopsis_leidyi   (Sea walnut)   0
Acropora_digitifera_v1.0 0
Amphimedon_queenslandica 0
Proterospongia_sp._ATCC_50818_ 0
Monosiga_brevicollis_ 0
Sphaeroforma_arctica_JP610_ 0
Capsaspora_owczarzaki_ATCC_30864_ 0
Spizellomyces_punctatus_DAOM_BR117_ 0
Dictyostelium_discoideum 13
Dictyostelium_purpureum_ 6
Selaginella_moellendorffii_ 0
Phaseolus_vulgaris_v186   (French bean)   0
Glycine_max_v109   (Soybean)   0
Linum_usitatissimum_v200   (Flax)   0
Brachypodium_distachyon_   (Stiff brome)   0
Oryza_brachyantha_22   (Malo sina)   0
Physcomitrella_patens 0
Chlorella_variabilis_sp._NC64A_ 0
Plasmodium_yoelii_ssp._yoelii_1_ 0
Synechocystis_sp._PCC_6803 0
Synechococcus_sp._CC9311 1
Ilumatobacter_coccineus 0
Acidothermus_cellulolyticus_11B 0
Catenulispora_acidiphila_DSM_44928 2
Thermobifida_fusca_YX 1
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 1
Thermomonospora_curvata_DSM_43183 2
Streptosporangium_roseum_DSM_43021 1
Kitasatospora_setae_KM-6054 0
Streptomyces_sp._SirexAA-E 0
Streptomyces_bingchenggensis_BCW-1 1
Streptomyces_violaceusniger_Tu_4113 1
Streptomyces_avermitilis_MA-4680 1
Streptomyces_scabiei_87.22 1
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 1
Actinosynnema_mirum_DSM_43827 1
Amycolatopsis_mediterranei_U32 0
Nocardioides_sp._JS614 0
Verrucosispora_maris_AB-18-032 3
Micromonospora_sp._L5 1
Micromonospora_aurantiaca_ATCC_27029 1
Actinoplanes_sp._N902-109 0
Actinoplanes_sp._SE50/110 2
Actinoplanes_missouriensis_431 1
Mycobacterium_ulcerans_Agy99 0
Mycobacterium_marinum_M 0
Jonesia_denitrificans_DSM_20603 0
Cellulomonas_flavigena_DSM_20109 2
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 0
Herpetosiphon_aurantiacus_DSM_785 0
Clostridium_clariflavum_DSM_19732 4
Eubacterium_siraeum 0
Clostridium_cellulolyticum_H10 2
Clostridium_thermocellum_ATCC_27405 5
Ruminococcus_bromii 1
Ruminococcus_albus_7 0
Desulfosporosinus_orientis_DSM_765 1
Desulfitobacterium_hafniense_Y51 1
Desulfitobacterium_dehalogenans_ATCC_51507 1
Desulfotomaculum_acetoxidans_DSM_771 0
Eubacterium_eligens_ATCC_27750 0
Clostridium_saccharolyticum_WM1 1
Clostridium_phytofermentans_ISDg 0
Clostridium_lentocellum_DSM_5427 0
Eubacterium_rectale_M104/1 0
Eubacterium_rectale_ATCC_33656 0
Coprococcus_sp._ART55/1 0
Butyrivibrio_proteoclasticus_B316 0
Butyrivibrio_fibrisolvens 0
Clostridium_sp._BNL1100 1
Clostridium_ljungdahlii_DSM_13528 0
Clostridium_perfringens_ATCC_13124 0
Clostridium_cellulovorans_743B 1
Clostridium_botulinum_A_str._ATCC_3502 0
Caldicellulosiruptor_obsidiansis_OB47 0
Caldicellulosiruptor_kronotskyensis_2002 0
Caldicellulosiruptor_lactoaceticus_6A 0
Caldicellulosiruptor_kristjanssonii_177R1B 0
Caldicellulosiruptor_saccharolyticus_DSM_8903 0
Caldicellulosiruptor_bescii_DSM_6725 0
Acetohalobium_arabaticum_DSM_5501 1
Halothermothrix_orenii_H_168 1
Halanaerobium_hydrogeniformans 1
Halanaerobium_praevalens_DSM_2228 1
Paenibacillus_sp._JDR-2 0
Paenibacillus_mucilaginosus_3016 0
Bacillus_thuringiensis_str._Al_Hakam 0
Bacillus_cereus_03BB102 0
Candidatus_Cloacamonas_acidaminovorans 0
Melioribacter_roseus_P3M 0
Haliscomenobacter_hydrossis_DSM_1100 0
Niastella_koreensis_GR20-10 0
Salinibacter_ruber_M8 0
Fibrella_aestuarina 0
Spirosoma_linguale_DSM_74 0
Rhodopirellula_baltica_SH_1 0
Marinitoga_piezophila_KA3 1
Mesotoga_prima_MesG1.Ag.4.2 2
Kosmotoga_olearia_TBF_19.5.1 1
Thermosipho_melanesiensis_BI429 1
Caldisericum_exile_AZM16c01 0
Candidatus_Chloracidobacterium_thermophilum_B 0
Candidatus_Solibacter_usitatus_Ellin6076 0
Granulicella_tundricola_MP5ACTX9 0
Granulicella_mallensis_MP5ACTX8 0
Candidatus_Koribacter_versatilis_Ellin345 0
Terriglobus_saanensis_SP1PR4 0
Terriglobus_roseus_DSM_18391 0
Acidobacterium_capsulatum_ATCC_51196 0
Candidatus_Nitrospira_defluvii 0
Desulfatibacillum_alkenivorans_AK-01 0
Desulfococcus_oleovorans_Hxd3 0
Geobacter_daltonii_FRC-32 0
Geobacter_sp._M21 0
Geobacter_uraniireducens_Rf4 0
Geobacter_lovleyi_SZ 1
Geobacter_bemidjiensis_Bem 0
Geobacter_sulfurreducens_KN400 0
Geobacter_metallireducens_GS-15 0
Pelobacter_carbinolicus_DSM_2380 0
Haliangium_ochraceum_DSM_14365 1
Sorangium_cellulosum_'So_ce_56' 2
Stigmatella_aurantiaca_DW4/3-1 0
Leptothrix_cholodnii_SP-6 0
Ralstonia_solanacearum_CFBP2957 1
Burkholderia_thailandensis_E264 0
Burkholderia_pseudomallei_1106a 0
Burkholderia_mallei_SAVP1 0
Burkholderia_ambifaria_AMMD 0
Burkholderia_cenocepacia_HI2424 0
Burkholderia_vietnamiensis_G4 0
Burkholderia_gladioli_BSR3 0
Nitrosospira_multiformis_ATCC_25196 0
Nitrosomonas_sp._Is79A3 0
Nitrosomonas_eutropha_C91 1
Nitrosomonas_europaea_ATCC_19718 1
Sideroxydans_lithotrophicus_ES-1 0
Methylotenera_versatilis_301 0
Asticcacaulis_excentricus_CB_48 0
Saccharophagus_degradans_2-40 0
Teredinibacter_turnerae_T7901 1
Cellvibrio_japonicus_Ueda107 0
Vibrio_anguillarum_775 0
Photobacterium_profundum_SS9 0
Shewanella_piezotolerans_WP3 0
Shewanella_loihica_PV-4 0
Shewanella_halifaxensis_HAW-EB4 0
Shewanella_sediminis_HAW-EB3 0
Shewanella_pealeana_ATCC_700345 0
Shewanella_oneidensis_MR-1 0
Shewanella_baltica_OS185 0
Shewanella_woodyi_ATCC_51908 0
Shewanella_sp._MR-4 0
Shewanella_amazonensis_SB2B 0
Shewanella_violacea_DSS12 0
Shewanella_putrefaciens_CN-32 0
Colwellia_psychrerythraea_34H 0
Pseudoalteromonas_sp._SM9913 0
Hahella_chejuensis_KCTC_2396 1
Xylella_fastidiosa_M23 0
Xanthomonas_albilineans_GPE_PC73 0
Xenorhabdus_nematophila_ATCC_19061 0
Cronobacter_turicensis_z3032 0
Methanococcoides_burtonii_DSM_6242 1
Methanosarcina_acetivorans_C2A 1
Methanosphaerula_palustris_E1-9c 0
Ferroglobus_placidus_DSM_10642 0
Thermococcus_kodakarensis_KOD1 0
Pyrococcus_furiosus_COM1 0
Halopiger_xanaduensis_SH-6 0
Haloterrigena_turkmenica_DSM_5511 1
Natrinema_sp._J7-2 0
Natrialba_magadii_ATCC_43099 1
Natronomonas_pharaonis_DSM_2160 0
Methanotorris_igneus_Kol_5 0
methanocaldococcus_infernus_ME 0
Methanothermococcus_okinawensis_IH1 0
Methanococcus_aeolicus_Nankai-3 0
Methanococcus_voltae_A3 0
Methanococcus_vannielii_SB 0

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Strains
Genome     Number
Synechocystis_sp._PCC_6803_substr._PCC-P 0
Synechocystis_sp._PCC_6803_substr._PCC-N 0
Synechocystis_sp._PCC_6803_substr._GT-I 0
Synechocystis_sp._PCC_6803 0
Synechococcus_sp._RCC307 0
Synechococcus_sp._WH_7803 0
Prochlorococcus_marinus_str._MIT_9303 0
Nocardiopsis_alba_ATCC_BAA-2165 1
Streptomyces_rapamycinicus_NRRL_5491 1
Streptomyces_davawensis_JCM_4913 1
Streptomyces_collinus_Tu_365 1
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 1
Amycolatopsis_mediterranei_RB 0
Amycolatopsis_mediterranei_S699 0
Amycolatopsis_mediterranei_S699 0
Actinoplanes_friuliensis_DSM_7358 3
Mycobacterium_liflandii_128FXT 1
Mycobacterium_kansasii_ATCC_12478 0
Eubacterium_siraeum_V10Sc8a 0
Clostridium_thermocellum_DSM_1313 5
Ruminococcus_champanellensis_18P13 0
Desulfosporosinus_meridiei_DSM_13257 1
Desulfitobacterium_hafniense_DCB-2 1
Clostridium_saccharobutylicum_DSM_13864 0
Clostridium_perfringens_str._13 0
Clostridium_botulinum_H04402_065 0
Clostridium_botulinum_F_str._230613 0
Clostridium_botulinum_F_str._Langeland 0
Clostridium_botulinum_B1_str._Okra 0
Clostridium_botulinum_A2_str._Kyoto 0
Clostridium_botulinum_A3_str._Loch_Maree 0
Clostridium_botulinum_A_str._Hall 0
Clostridium_botulinum_A_str._ATCC_19397 0
Thermoanaerobacterium_saccharolyticum_JW/SL-YS485 0
Halobacteroides_halobius_DSM_5150 1
Paenibacillus_sp._Y412MC10 0
Paenibacillus_mucilaginosus_KNP414 0
Paenibacillus_mucilaginosus_K02 0
Bacillus_toyonensis_BCT-7112 0
Bacillus_thuringiensis_MC28 0
Bacillus_cereus_FRI-35 0
Bacillus_cereus_biovar_anthracis_str._CI 0
Bacillus_cereus_AH187 0
Bacillus_cereus_B4264 0
Bacillus_cereus_Q1 0
Bacillus_cereus_F837/76 0
Bacillus_cereus_NC7401 0
Bacillus_cereus_E33L 0
Bacillus_cereus_ATCC_10987 0
Geobacter_sp._M18 0
Geobacter_sulfurreducens_PCA 0
Sorangium_cellulosum_So0157-2 4
Ralstonia_solanacearum_FQY_4 0
Ralstonia_solanacearum_Po82 0
Ralstonia_solanacearum_PSI07 1
Ralstonia_solanacearum_GMI1000 1
Burkholderia_sp._KJ006 0
Burkholderia_thailandensis_MSMB121 0
Burkholderia_pseudomallei_MSHR305 0
Burkholderia_pseudomallei_NCTC_13179 0
Burkholderia_pseudomallei_BPC006 0
Burkholderia_pseudomallei_1026b 0
Burkholderia_pseudomallei_MSHR346 0
Burkholderia_pseudomallei_668 0
Burkholderia_pseudomallei_1710b 0
Burkholderia_pseudomallei_K96243 0
Burkholderia_mallei_NCTC_10229 0
Burkholderia_mallei_NCTC_10247 0
Burkholderia_mallei_ATCC_23344 0
Burkholderia_lata 0
Burkholderia_ambifaria_MC40-6 0
Burkholderia_cenocepacia_MC0-3 0
Burkholderia_cenocepacia_AU_1054 0
Burkholderia_cenocepacia_J2315 0
Nitrosomonas_sp._AL212 0
Vibrio_fischeri_ES114 0
Vibrio_sp._EJY3 0
Vibrio_anguillarum_Listonella_anguillarum_M3 0
Vibrio_vulnificus_YJ016 0
Shewanella_sp._W3-18-1 0
Shewanella_sp._ANA-3 0
Shewanella_baltica_BA175 0
Shewanella_baltica_OS678 0
Shewanella_baltica_OS117 0
Shewanella_baltica_OS223 0
Shewanella_baltica_OS195 0
Shewanella_baltica_OS155 0
Shewanella_sp._MR-7 0
Shewanella_putrefaciens_200 0
Alteromonas_macleodii_str._'English_Channel_673' 0
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 1
Alteromonas_macleodii_str._'Black_Sea_11' 0
Alteromonas_macleodii_ATCC_27126 0
Alcanivorax_dieselolei_B5 0
Xylella_fastidiosa_subsp._fastidiosa_GB514 0
Xylella_fastidiosa_M12 0
Xylella_fastidiosa_Temecula1 0
Xylella_fastidiosa_9a5c 0
Methanolobus_psychrophilus_R15 0
Methanosarcina_mazei_Tuc01 0
Archaeoglobus_sulfaticallidus_PM70-1 0
Pyrococcus_furiosus_DSM_3638 0
Natrinema_pellirubrum_DSM_15624 0
Natronobacterium_gregoryi_SP2 1
Methanococcus_maripaludis_X1 0

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Longest transcript per gene
Genome     Number
Ciona_intestinalis_69   (Vase tunicate)   0

Others
Genome     Number
Nicotiana_benthamiana_0.4.4_(Early_draft) 0
NCBI_plasmid_sequences_(Plasmids) 4
TargetDB__(Targets) 4
STRING_v9.0.5_(STRING) 45
Uniprot_2018_03_genome 3270
NCBI_2017_08_genome 1147
Protozoadb_2010_08_(Protozoadb) 0
Protein_Data_Bank_(all_PDB_sequenc) 11
NCBI_viral_sequences_(Viral) 0

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