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Domain combinations for _gap_,49384,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

49384 - Carbohydrate-binding domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Ciona_intestinalis_76   (Vase tunicate)   1
Helobdella_robusta_ 0
Mnemiopsis_leidyi   (Sea walnut)   0
Amphimedon_queenslandica 0
Proterospongia_sp._ATCC_50818_ 2
Monosiga_brevicollis_ 0
Sphaeroforma_arctica_JP610_ 1
Spizellomyces_punctatus_DAOM_BR117_ 0
Selaginella_moellendorffii_ 2
Phaseolus_vulgaris_v186   (French bean)   1
Glycine_max_v109   (Soybean)   1
Linum_usitatissimum_v200   (Flax)   6
Brachypodium_distachyon_   (Stiff brome)   1
Oryza_brachyantha_22   (Malo sina)   1
Physcomitrella_patens 2
Plasmodium_yoelii_ssp._yoelii_1_ 1
Actinoplanes_sp._N902-109 0
Actinoplanes_sp._SE50/110 0
Mycobacterium_marinum_M 0
Clostridium_clariflavum_DSM_19732 0
Clostridium_thermocellum_ATCC_27405 0
Ruminococcus_bromii 1
Ruminococcus_albus_7 0
Clostridium_ljungdahlii_DSM_13528 1
Clostridium_cellulovorans_743B 3
Caldicellulosiruptor_obsidiansis_OB47 0
Caldicellulosiruptor_kronotskyensis_2002 0
Caldicellulosiruptor_lactoaceticus_6A 0
Caldicellulosiruptor_kristjanssonii_177R1B 0
Caldicellulosiruptor_saccharolyticus_DSM_8903 0
Caldicellulosiruptor_bescii_DSM_6725 0
Paenibacillus_sp._JDR-2 1
Paenibacillus_mucilaginosus_3016 0
Bacillus_thuringiensis_str._Al_Hakam 0
Bacillus_cereus_03BB102 0
Candidatus_Cloacamonas_acidaminovorans 0
Haliscomenobacter_hydrossis_DSM_1100 6
Salinibacter_ruber_M8 1
Desulfatibacillum_alkenivorans_AK-01 2
Desulfococcus_oleovorans_Hxd3 1
Methanosphaerula_palustris_E1-9c 1
Ferroglobus_placidus_DSM_10642 1
Halopiger_xanaduensis_SH-6 2
Haloterrigena_turkmenica_DSM_5511 1
Natrinema_sp._J7-2 1
Natrialba_magadii_ATCC_43099 2
Natronomonas_pharaonis_DSM_2160 0
Methanotorris_igneus_Kol_5 0
methanocaldococcus_infernus_ME 0
Methanothermococcus_okinawensis_IH1 0
Methanococcus_aeolicus_Nankai-3 0
Methanococcus_voltae_A3 0
Methanococcus_vannielii_SB 0

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Strains
Genome     Number
Synechococcus_sp._WH_7803 1
Actinoplanes_friuliensis_DSM_7358 0
Clostridium_thermocellum_DSM_1313 0
Paenibacillus_sp._Y412MC10 0
Paenibacillus_mucilaginosus_KNP414 0
Paenibacillus_mucilaginosus_K02 0
Bacillus_toyonensis_BCT-7112 0
Bacillus_thuringiensis_MC28 0
Bacillus_cereus_FRI-35 0
Bacillus_cereus_biovar_anthracis_str._CI 0
Bacillus_cereus_AH187 0
Bacillus_cereus_B4264 0
Bacillus_cereus_Q1 0
Bacillus_cereus_F837/76 0
Bacillus_cereus_NC7401 0
Bacillus_cereus_E33L 0
Bacillus_cereus_ATCC_10987 0
Alcanivorax_dieselolei_B5 0
Archaeoglobus_sulfaticallidus_PM70-1 0
Natrinema_pellirubrum_DSM_15624 1
Methanococcus_maripaludis_X1 0

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Longest transcript per gene
Genome     Number
Ciona_intestinalis_69   (Vase tunicate)   1

Others
Genome     Number
Nicotiana_benthamiana_0.4.4_(Early_draft) 1
STRING_v9.0.5_(STRING) 13
NCBI_2017_08_genome 322
Uniprot_2018_03_genome 2455
Protozoadb_2010_08_(Protozoadb) 1
TargetDB__(Targets) 0

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