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Domain combinations for _gap_,49417,81296,_gap_,48403,47986 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

49417 - p53-like transcription factors
81296 - E set domains
48403 - Ankyrin repeat
47986 - DEATH domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   0
Canis_familiaris_76_3.1   (Dog)   0
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   0
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   0
Meleagris_gallopavo_76_2   (Turkey)   0
Gallus_gallus_76_4   (Chicken)   0
Anas_platyrhynchos_76_1.0   (Mallard)   0
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   0
Ficedula_albicollis_76_1.0   (Collared flycatcher)   0
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   0
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   2
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   1
Danio_rerio_76_9   (Zebrafish)   2
Octopus_bimaculoides_280 2
Heliconius_melpomene_   (Postman butterfly)   1
Linepithema_humile_v1.1   (Argentine ant)   1
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   1
Solenopsis_invicta_v.2.2.3   (Red fire ant)   1
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   1
Camponotus_floridanus_v3.3   (Florida carpenter ant)   1
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   1
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   1
Anopheles_gambiae_49_3j   (African malaria mosquito)   1
Tribolium_castaneum_3.0   (Red flour beetle)   1
Amphimedon_queenslandica 1

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Strains
Genome     Number
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   1

Longest transcript per gene
Genome     Number
Canis_familiaris_69_3.1   (Dog)   0
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   0
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   0
Meleagris_gallopavo_69_2   (Turkey)   0
Gallus_gallus_69_2   (Chicken)   0
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   0
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   0
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   1
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   1
Danio_rerio_69_9   (Zebrafish)   1

Others
Genome     Number
STRING_v9.0.5_(STRING) 7
Uniprot_2018_03_genome 2320
NCBI_2017_08_genome 246

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