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Domain combinations for _gap_,49785,51445 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

49785 - Galactose-binding domain-like
51445 - (Trans)glycosidases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Oikopleura_dioica 0
Atta_cephalotes_v1.1 1
Lucilia_cuprina   (Australian sheep blowfly)   0
Proterospongia_sp._ATCC_50818_ 0
Phycomyces_blakesleeanus_ 1
Sporisorium_reilianum_22 0
Sphaerobolus_stellatus_v1.0 0
Amanita_thiersii_Skay4041_v1.0 0
Galerina_marginata_v1.0 0
Agaricus_bisporus_var._bisporus_ 1
Gloeophyllum_trabeumv1.0 0
Punctularia_strigosozonata_v1.0 0
Sebacina_vermifera_MAFF_305830_v1.0 1
Phanerochaete_chrysosporium_RP-78_2.1 1
Daldinia_eschscholzii_EC12_v1.0 0
Thielavia_terrestris_NRRL_8126_ 0
Fusarium_verticillioides_7600_ 0
Mycosphaerella_graminicola_IPO323_ 0
Mycosphaerella_fijiensis_CIRAD86_ 0
Aspergillus_zonatus_v1.0 1
Selaginella_moellendorffii_ 1
Pinus_taeda   (Loblolly pine)   1
Eucalyptus_grandis_v201   (Rose gum)   0
Theobroma_cacao_B97-61/B2_v1   (Cacao)   0
Gossypium_raimondii_v221 0
Citrus_clementina_v165 0
Citrus_sinensis_v154   (Sweet orange)   1
Thellungiella_halophila_v173 0
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   2
Capsella_rubella_v183 0
Arabidopsis_lyrata_   (Lyrate rockcress)   1
Arabidopsis_thaliana_10   (Thale cress)   0
Carica_papaya_   (Papaya)   1
Medicago_truncatula_   (Barrel medic)   3
Phaseolus_vulgaris_v186   (French bean)   1
Glycine_max_v109   (Soybean)   1
Fragaria_vesca_   (Wild strawberry)   0
Malus_domestica_v196   (Apple)   1
Prunus_persica_v139   (Peach)   1
Linum_usitatissimum_v200   (Flax)   1
Vitis_vinifera_   (Wine grape)   1
Mimulus_guttatus_v140   (Spotted monkey flower)   0
Solanum_lycopersicum_v.2.3   (Tomato)   0
Solanum_tuberosum_   (Potato)   1
Triticum_urartu_22 1
Triticum_aestivum_22   (Bread wheat)   2
Aegilops_tauschii_22 2
Brachypodium_distachyon_   (Stiff brome)   3
Oryza_barthii_22   (African wild rice)   1
Oryza_meridionalis_22 0
Oryza_glumaepatula_22 1
Oryza_glaberrima   (African rice)   1
Oryza_punctata_22 0
Oryza_nivara_22 1
Oryza_brachyantha_22   (Malo sina)   1
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   1
Oryza_sativa_v193   (Rice)   1
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   1
Panicum_virgatum_v202   (Switchgrass)   1
Setaria_italica_v164   (Foxtail millet)   2
Zea_mays_subsp._mays_   (Maize)   7
Zea_mays_v181   (Maize)   8
Sorghum_bicolor_   (Sorghum)   1
Musa_balbisiana   (Balbis banana)   0
Physcomitrella_patens 0
Chlorella_variabilis_sp._NC64A_ 0
Volvox_carteri_f._nagariensis_ 0
Catenulispora_acidiphila_DSM_44928 0
Streptomyces_coelicolor_A3(2) 0
Streptomyces_violaceusniger_Tu_4113 0
Streptomyces_avermitilis_MA-4680 0
Streptomyces_scabiei_87.22 0
Actinosynnema_mirum_DSM_43827 0
Kribbella_flavida_DSM_17836 0
Actinoplanes_sp._N902-109 0
Actinoplanes_sp._SE50/110 0
Actinoplanes_missouriensis_431 0
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 0
Xylanimonas_cellulosilytica_DSM_15894 0
[Cellvibrio]_gilvus_ATCC_13127 0
Arthrobacter_phenanthrenivorans_Sphe3 0
Arthrobacter_arilaitensis_Re117 1
Herpetosiphon_aurantiacus_DSM_785 0
Eubacterium_siraeum 1
Ruminococcus_albus_7 2
Clostridium_phytofermentans_ISDg 1
Coprococcus_sp._ART55/1 0
Roseburia_intestinalis 0
Clostridium_cellulovorans_743B 0
Clostridium_acetobutylicum_ATCC_824 0
Caldicellulosiruptor_hydrothermalis_108 0
Paenibacillus_terrae_HPL-003 0
Paenibacillus_polymyxa_M1 1
Niastella_koreensis_GR20-10 1
Chitinophaga_pinensis_DSM_2588 0
Belliella_baltica_DSM_15883 1
Fibrella_aestuarina 2
Cytophaga_hutchinsonii_ATCC_33406 1
Spirosoma_linguale_DSM_74 1
Parabacteroides_distasonis_ATCC_8503 0
Tannerella_forsythia_ATCC_43037 0
Paludibacter_propionicigenes_WB4 0
Prevotella_ruminicola_23 0
Bacteroides_salanitronis_DSM_18170 0
Bacteroides_vulgatus_ATCC_8482 0
Bacteroides_thetaiotaomicron_VPI-5482 0
Pedobacter_saltans_DSM_12145 1
Owenweeksia_hongkongensis_DSM_17368 0
Zunongwangia_profunda_SM-A87 1
Fibrobacter_succinogenes_subsp._succinogenes_S85 1
Opitutus_terrae_PB90-1 0
Sphaerochaeta_coccoides_DSM_17374 0
Mesotoga_prima_MesG1.Ag.4.2 0
Thermotoga_lettingae_TMO 0
Thermotoga_sp._RQ2 0
Dictyoglomus_turgidum_DSM_6724 0
Candidatus_Solibacter_usitatus_Ellin6076 0
Granulicella_tundricola_MP5ACTX9 0
Granulicella_mallensis_MP5ACTX8 0
Candidatus_Koribacter_versatilis_Ellin345 0
Terriglobus_saanensis_SP1PR4 1
Terriglobus_roseus_DSM_18391 0
Acidobacterium_capsulatum_ATCC_51196 0
Rubrivivax_gelatinosus_IL144 1
Saccharophagus_degradans_2-40 1
Cellvibrio_japonicus_Ueda107 1
Pseudoxanthomonas_suwonensis_11-1 0
Methanocella_paludicola_SANAE 1

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Strains
Genome     Number
Hordeum_vulgare_22   (Domesticated barley)   8
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   0
Streptomyces_davawensis_JCM_4913 0
Amycolatopsis_orientalis_HCCB10007 0
Actinoplanes_friuliensis_DSM_7358 0
Clavibacter_michiganensis_subsp._nebraskensis_NCPPB_2581 0
Chthonomonas_calidirosea_T49 0
Eubacterium_siraeum_V10Sc8a 1
Ruminococcus_champanellensis_18P13 1
Roseburia_intestinalis_XB6B4 0
Clostridium_saccharobutylicum_DSM_13864 0
Clostridium_acetobutylicum_DSM_1731 0
Clostridium_acetobutylicum_EA_2018 0
Paenibacillus_polymyxa_CR1 0
Paenibacillus_polymyxa_SC2 1
Paenibacillus_polymyxa_E681 1
Echinicola_vietnamensis_DSM_17526 0
Prevotella_dentalis_DSM_3688 0
Bacteroides_xylanisolvens_XB1A 1
Fibrobacter_succinogenes_subsp._succinogenes_S85 1
Simiduia_agarivorans_SA1_=_DSM_21679 0

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Longest transcript per gene
Genome     Number
Arabidopsis_thaliana_10   (Thale cress)   0

Others
Genome     Number
Lotus_japonicus__(Early_assembly) 1
Malus_x_domestica_(Duplicate)   (Apple)   1
Nicotiana_benthamiana_0.4.4_(Early_draft) 3
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   0
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   0
STRING_v9.0.5_(STRING) 10
Uniprot_2018_03_genome 2610
NCBI_2017_08_genome 454
TargetDB__(Targets) 1

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