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Home > SCOP hierarchy > Domain combination - _gap_,49785,_gap_,57850,57850,_gap_

Domain combinations for _gap_,49785,_gap_,57850,57850,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

49785 - Galactose-binding domain-like
57850 - RING/U-box
57850 - RING/U-box

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Dipodomys_ordii_76_1 (Ord's kangaroo rat) 1

Heterocephalus_glaber_v1.7-2 (Naked mole-rat) 1

Ochotona_princeps_76 (American pika) 1

Vicugna_pacos_76_1 (Alpaca) 1

Mustela_putorius_furo_76_1.0 (Domestic ferret) 1

Myotis_lucifugus_76_2.0 (Little brown bat) 1

Monodelphis_domestica_76_5 (Gray short-tailed opossum) 1

Ornithorhynchus_anatinus_76_5 (Platypus) 1

Meleagris_gallopavo_76_2 (Turkey) 1

Anas_platyrhynchos_76_1.0 (Mallard) 1

Ficedula_albicollis_76_1.0 (Collared flycatcher) 1

Pelodiscus_sinensis_76_1.0 (Chinese soft-shelled turtle) 1

Anolis_carolinensis_76_2.0 (Green anole) 1

Longest transcript per gene
Genome Number

Dipodomys_ordii_69_1 (Ord's kangaroo rat) 1

Ochotona_princeps_69 (American pika) 1

Vicugna_pacos_69_1 (Alpaca) 1

Mustela_putorius_furo_69_1.0 (Domestic ferret) 1

Myotis_lucifugus_69_2.0 (Little brown bat) 1

Monodelphis_domestica_69_5 (Gray short-tailed opossum) 1

Ornithorhynchus_anatinus_69_5 (Platypus) 1

Meleagris_gallopavo_69_2 (Turkey) 1

Pelodiscus_sinensis_69_1.0 (Chinese soft-shelled turtle) 1

Anolis_carolinensis_69_2.0 (Green anole) 1

Others
Genome Number

STRING_v9.0.5_(STRING) 3

Uniprot_2018_03_genome 594

NCBI_2017_08_genome 109

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