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Domain combinations for _gap_,49854,49854,_gap_,49854,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

49854 - Spermadhesin, CUB domain
49854 - Spermadhesin, CUB domain
49854 - Spermadhesin, CUB domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Latimeria_chalumnae_76_1   (Coelacanth)   0
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   0
Crassostrea_gigas_22   (Pacific oyster)   1
Lottia_gigantea_   (Owl limpet)   0
Helobdella_robusta_ 1
Danaus_plexippus_OGS1.0   (Monarch butterfly)   0
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   0
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   0
Drosophila_pseudoobscura_2.13 0
Drosophila_persimilis_1.3 0
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   1
Tribolium_castaneum_3.0   (Red flour beetle)   0
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   1
Acyrthosiphon_pisum_   (Pea aphid)   0
Rhodnius_prolixus_22 1
Strigamia_maritima_22 1
Sarcoptes_scabiei 0
Tetranychus_urticae_   (Two-spotted spider mite)   0
Meloidogyne_incognita_   (Southern root-knot nematode)   0
Meloidogyne_hapla_ 0
Onchocerca_volvulus_22 0
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   0
Caenorhabditis_brenneri_ 0
Caenorhabditis_elegans_76_235   (Roundworm)   0
Caenorhabditis_briggsae_2 0
Proterospongia_sp._ATCC_50818_ 1
Cyanophora_paradoxa_ 0

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Strains
Genome     Number
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   0

Longest transcript per gene
Genome     Number
Latimeria_chalumnae_69_1   (Coelacanth)   0
Caenorhabditis_elegans_69_215   (Roundworm)   0

Others
Genome     Number
STRING_v9.0.5_(STRING) 2
NCBI_2017_08_genome 8
Uniprot_2018_03_genome 300

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