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Home > SCOP hierarchy > Domain combination - _gap_,49854,_gap_,57196,_gap_

Domain combinations for _gap_,49854,_gap_,57196,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

49854 - Spermadhesin, CUB domain
57196 - EGF/Laminin

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Saccoglossus_kowalevskii_v3.0 0

Oryzias_latipes_76_1 (Japanese medaka) 1

Poecilia_formosa_76 (Amazon molly) 1

Oreochromis_niloticus_76_1.0 (Nile tilapia) 1

Danio_rerio_76_9 (Zebrafish) 1

Crassostrea_gigas_22 (Pacific oyster) 1

Nasonia_vitripennis_ (Jewel wasp) 1

Linepithema_humile_v1.1 (Argentine ant) 1

Solenopsis_invicta_v.2.2.3 (Red fire ant) 1

Acromyrmex_echinatior_v3.8 (Panamanian leafcutter ant) 1

Atta_cephalotes_v1.1 1

Camponotus_floridanus_v3.3 (Florida carpenter ant) 1

Lucilia_cuprina (Australian sheep blowfly) 1

Drosophila_willistoni_1.3 1

Drosophila_pseudoobscura_2.13 1

Drosophila_persimilis_1.3 1

Drosophila_yakuba_1.3 1

Drosophila_melanogaster_76_5 (Fruit fly) 1

Drosophila_erecta_1.3 1

Drosophila_ananassae_1.3 1

Pediculus_humanus_corporis__(Early_assembly) (Human body louse) 1

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Strains
Genome Number

Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2) (Tropical clawed frog) 1

Drosophila_melanogaster_FlyBase_5.12_(FlyBase) (Fruit fly) 1

Longest transcript per gene
Genome Number

Oryzias_latipes_69_1 (Japanese medaka) 1

Oreochromis_niloticus_69_1.0 (Nile tilapia) 1

Danio_rerio_69_9 (Zebrafish) 1

Drosophila_melanogaster_69_5 (Fruit fly) 1

Others
Genome Number

STRING_v9.0.5_(STRING) 8

NCBI_2017_08_genome 93

Uniprot_2018_03_genome 481

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