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  Home > SCOP hierarchy > Domain combination - _gap_,49899

Domain combinations for _gap_,49899 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

49899 - Concanavalin A-like lectins/glucanases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   52
Pan_troglodytes_76_2.1.4   (Chimpanzee)   12
Gorilla_gorilla_76_3.1   (Western gorilla)   17
Pongo_abelii_76_2   (Sumatran orangutan)   9
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   13
Papio_anubis_76   (Olive baboon)   11
Macaca_mulatta_76_1   (Rhesus monkey)   19
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   21
Otolemur_garnettii_76_3   (Small-eared galago)   7
Microcebus_murinus_76_1   (Gray mouse lemur)   16
Rattus_norvegicus_76_5.0   (Norway rat)   10
Mus_musculus_76_38   (House mouse)   19
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   8
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   10
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   14
Cavia_porcellus_76_3   (Domestic guinea pig)   11
Oryctolagus_cuniculus_76_2   (Rabbit)   12
Ochotona_princeps_76   (American pika)   17
Tupaia_belangeri_76   (Northern tree shrew)   16
Sus_scrofa_76_10.2   (Pig)   13
Bos_taurus_76_3.1   (Cattle)   11
Ovis_aries_76_3.1   (Sheep)   14
Vicugna_pacos_76_1   (Alpaca)   10
Tursiops_truncatus_76_1   (Bottlenose dolphin)   15
Mustela_putorius_furo_76_1.0   (Domestic ferret)   7
Ailuropoda_melanoleuca_76_1   (Giant panda)   12
Canis_familiaris_76_3.1   (Dog)   8
Felis_catus_76_6.2   (Domestic cat)   10
Equus_caballus_76_2   (Horse)   11
Myotis_lucifugus_76_2.0   (Little brown bat)   12
Pteropus_vampyrus_76_1   (Large flying fox)   15
Sorex_araneus_76_1   (European shrew)   15
Erinaceus_europaeus_76   (Western European hedgehog)   10
Procavia_capensis_76_1   (Cape rock hyrax)   12
Loxodonta_africana_76_3   (African savanna elephant)   9
Echinops_telfairi_76   (Small Madagascar hedgehog)   11
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   14
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   7
Macropus_eugenii_76_1.0   (Tammar wallaby)   11
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   14
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   8
Ornithorhynchus_anatinus_76_5   (Platypus)   21
Saccoglossus_kowalevskii_v3.0 12
Petromyzon_marinus_76_7.0   (Sea lamprey)   3
Meleagris_gallopavo_76_2   (Turkey)   15
Gallus_gallus_76_4   (Chicken)   11
Anas_platyrhynchos_76_1.0   (Mallard)   9
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   7
Ficedula_albicollis_76_1.0   (Collared flycatcher)   9
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   18
Anolis_carolinensis_76_2.0   (Green anole)   13
Xenopus_laevis_   (African clawed frog)   9
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   12
Latimeria_chalumnae_76_1   (Coelacanth)   21
Lepisosteus_oculatus_76   (Spotted gar)   26
Gadus_morhua_76_1   (Atlantic cod)   26
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   16
Takifugu_rubripes_76_4   (Torafugu)   39
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   34
Oryzias_latipes_76_1   (Japanese medaka)   27
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   27
Poecilia_formosa_76   (Amazon molly)   27
Oreochromis_niloticus_76_1.0   (Nile tilapia)   40
Astyanax_mexicanus_76   (Mexican tetra)   32
Danio_rerio_76_9   (Zebrafish)   45
Oikopleura_dioica 3
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   8
Ciona_intestinalis_76   (Vase tunicate)   11
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   7
Adineta_vaga 17
Octopus_bimaculoides_280 7
Crassostrea_gigas_22   (Pacific oyster)   8
Lottia_gigantea_   (Owl limpet)   11
Helobdella_robusta_ 1
Capitella_sp._I_ 7
Danaus_plexippus_OGS1.0   (Monarch butterfly)   5
Heliconius_melpomene_   (Postman butterfly)   7
Bombyx_mori_   (Domestic silkworm)   8
Nasonia_vitripennis_   (Jewel wasp)   2
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   3
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   3
Linepithema_humile_v1.1   (Argentine ant)   3
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   4
Solenopsis_invicta_v.2.2.3   (Red fire ant)   4
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   2
Atta_cephalotes_v1.1 2
Camponotus_floridanus_v3.3   (Florida carpenter ant)   1
Lucilia_cuprina   (Australian sheep blowfly)   2
Drosophila_grimshawi_1.3 4
Drosophila_willistoni_1.3 4
Drosophila_pseudoobscura_2.13 5
Drosophila_persimilis_1.3 6
Drosophila_suzukii 4
Drosophila_yakuba_1.3 6
Drosophila_simulans_1.3 6
Drosophila_sechellia_1.3 5
Drosophila_melanogaster_76_5   (Fruit fly)   6
Drosophila_erecta_1.3 6
Drosophila_ananassae_1.3 3
Drosophila_virilis_1.2 4
Drosophila_mojavensis_1.3 4
Megaselia_scalaris_22 2
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   2
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   8
Anopheles_darlingi_22   (American malaria mosquito)   6
Anopheles_gambiae_49_3j   (African malaria mosquito)   5
Tribolium_castaneum_3.0   (Red flour beetle)   2
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   0
Acyrthosiphon_pisum_   (Pea aphid)   2
Rhodnius_prolixus_22 2
Daphnia_pulex_   (Common water flea)   1
Strigamia_maritima_22 3
Sarcoptes_scabiei 4
Tetranychus_urticae_   (Two-spotted spider mite)   2
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   5
Pristionchus_pacificus_ 9
Meloidogyne_incognita_   (Southern root-knot nematode)   14
Meloidogyne_hapla_ 5
Onchocerca_volvulus_22 1
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   2
Caenorhabditis_japonica_ 4
Caenorhabditis_brenneri_ 5
Caenorhabditis_remanei_ 6
Caenorhabditis_elegans_76_235   (Roundworm)   12
Caenorhabditis_briggsae_2 2
Trichinella_spiralis_22 3
Hymenolepis_microstoma_ 0
Echinococcus_multilocularis_ 1
Echinococcus_granulosus_ 1
Taenia_solium_   (Pork tapeworm)   1
Schistosoma_mansoni_ 0
Mnemiopsis_leidyi   (Sea walnut)   4
Thelohanellus_kitauei 0
Acropora_digitifera_v1.0 8
Nematostella_vectensis_1.0   (Starlet sea anemone)   9
Hydra_vulgaris 5
Amphimedon_queenslandica 2
Trichoplax_adhaerens_ 5
Proterospongia_sp._ATCC_50818_ 1
Monosiga_brevicollis_ 0
Sphaeroforma_arctica_JP610_ 2
Capsaspora_owczarzaki_ATCC_30864_ 0
Conidiobolus_coronatus_NRRL28638_v1.0 2
Mortierella_verticillata_NRRL_6337_ 3
Phycomyces_blakesleeanus_ 5
Rhizopus_oryzae_RA_99-880_ 6
Mucor_circinelloides_ 2
Rhizomucor_miehei_CAU432_ 3
Malassezia_globosa_CBS_7966_ 2
Sporisorium_reilianum_22 2
Ustilago_maydis_ 2
Mixia_osmundae_IAM_14324_v1.0 2
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 6
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 4
Melampsora_laricis-populina_ 7
Rhodotorula_graminis_WP1_v1.0 4
Sporobolomyces_roseus_IAM_13481_ 1
Microbotryum_violaceum_22 0
Wallemia_sebi_v1.0 1
Sphaerobolus_stellatus_v1.0 11
Piloderma_croceum_F_1598_v1.0 7
Serpula_lacrymans_var._lacrymans_S7.9_ 3
Coniophora_puteana 11
Hydnomerulius_pinastri_v2.0 8
Paxillus_rubicundulus_Ve08.2h10_v1.0 2
Pisolithus_microcarpus_441_v1.0 3
Pisolithus_tinctorius_Marx_270_v1.0 3
Scleroderma_citrinum_Foug_A_v1.0 5
Coprinopsis_cinerea_okayama7_130_v3 12
Pleurotus_ostreatus_   (Oyster mushroom)   7
Amanita_thiersii_Skay4041_v1.0 5
Amanita_muscaria_Koide_v1.0   (Fly agaric)   7
Galerina_marginata_v1.0 6
Hebeloma_cylindrosporum_h7_v2.0 5
Laccaria_bicolor_S238N-H82_ 13
Agaricus_bisporus_var._bisporus_ 4
Schizophyllum_commune_ 8
Stereum_hirsutum_FP-91666_SS1__v1.0 13
Heterobasidion_annosum_ 7
Gloeophyllum_trabeumv1.0 4
Punctularia_strigosozonata_v1.0 7
Sebacina_vermifera_MAFF_305830_v1.0 4
Fomitiporia_mediterranea_v1.0 2
Tulasnella_calospora_AL13/4D_v1.0 8
Postia_placenta_ 13
Wolfiporia_cocos_MD-104_SS10__v1.0 5
Fomitopsis_pinicolav1.0 8
Fomitopsis_pinicola_FP-58527_SS1_v3.0 8
Phanerochaete_chrysosporium_RP-78_2.1 12
Dichomitus_squalens 7
Trametes_versicolor_v1.0 7
Tremella_mesenterica_   (Witches' butter)   2
Daldinia_eschscholzii_EC12_v1.0 5
Apiospora_montagnei_NRRL_25634_v1.0 2
Magnaporthe_poae_ATCC_64411_22 6
Magnaporthe_grisea_70-15_ 6
Podospora_anserina_ 3
Sporotrichum_thermophile_ATCC_42464_ 6
Thielavia_terrestris_NRRL_8126_ 5
Chaetomium_globosum_CBS_148.51_ 3
Neurospora_tetrasperma_ 6
Neurospora_discreta_FGSC_8579_ 4
Neurospora_crassa_OR74A_ 7
Cryphonectria_parasitica_   (Chestnut blight fungus)   5
Verticillium_albo-atrum_VaMs.102_ 4
Verticillium_dahliae_VdLs.17_ 2
Acremonium_alcalophilumv_1.0 5
Glomerella_graminicola_22 5
Fusarium_graminearum_ 7
Nectria_haematococca_mpVI_ 5
Fusarium_oxysporum_f._sp._lycopersici_4286_ 8
Fusarium_verticillioides_7600_ 5
Trichoderma_asperellum_CBS_433.97_v1.0 6
Trichoderma_atroviride_ 8
Trichoderma_citrinoviride_v1.0 5
Trichoderma_reesei_1.2 5
Trichoderma_virens_Gv29-8_ 5
Trichoderma_longibrachiatum_ATCC_18648_v1.0 3
Trichoderma_harzianum_CBS_226.95_v1.0 4
Amorphotheca_resinae_v1.0   (Creosote fungus)   6
Botrytis_cinerea_B05.10_ 7
Sclerotinia_sclerotiorum_ 8
Blumeria_graminis_22 3
Didymella_exigua_CBS_183.55_v1.0 6
Leptosphaeria_maculans_22 5
Setosphaeria_turcica_v1.0 3
Cochliobolus_miyabeanus_ATCC_44560_v1.0 4
Cochliobolus_victoriae_FI3_v1.0 3
Cochliobolus_carbonum_26-R-13_v1.0 3
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   5
Alternaria_brassicicola_ 7
Cochliobolus_lunatus_m118_v2.0 3
Pyrenophora_teres_f._teres_22 4
Pyrenophora_tritici-repentis_ 5
Stagonospora_nodorum_ 8
Mycosphaerella_graminicola_IPO323_ 3
Zasmidium_cellare_ATCC_36951_v1.0 5
Dothistroma_septosporum 1
Septoria_musiva_v1.0 3
Mycosphaerella_fijiensis_CIRAD86_ 2
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 2
Paracoccidioides_brasiliensis_Pb18_ 1
Coccidioides_posadasii_RMSCC_3488_ 1
Coccidioides_immitis_RS_ 1
Ajellomyces_dermatitidis_SLH14081_ 3
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 1
Microsporum_canis_CBS_113480_ 4
Trichophyton_equinum_CBS_127.97_ 4
Trichophyton_verrucosum_HKI_0517_ 3
Arthroderma_benhamiae_CBS_112371_ 4
Trichophyton_tonsurans_CBS_112818_ 2
Trichophyton_rubrum_CBS_118892_ 2
Uncinocarpus_reesii_1704_ 1
Aspergillus_zonatus_v1.0 5
Penicillium_chrysogenum_Wisconsin_54-1255_ 5
Penicillium_chrysogenum_v1.0 4
Aspergillus_acidus_v1.0 5
Aspergillus_fumigatus_Af293 4
Aspergillus_brasiliensis_v1.0 5
Aspergillus_nidulans_FGSC_A4_ 5
Aspergillus_sydowii_v1.0 2
Aspergillus_versicolor_v1.0 4
Aspergillus_glaucus 4
Aspergillus_carbonarius_ITEM_5010_ 5
Neosartorya_fischeri_NRRL_181_ 5
Aspergillus_terreus_NIH2624_ 2
Aspergillus_tubingensis_v1.0 6
Aspergillus_wentii_v1.0 3
Aspergillus_oryzae_RIB40_ 3
Aspergillus_niger_22 4
Aspergillus_niger_ATCC_1015_ 4
Aspergillus_flavus_NRRL3357_ 3
Aspergillus_clavatus_NRRL_1_ 6
Penicillium_marneffei_ATCC_18224_ 8
Tuber_melanosporum_Mel28_22 0
Tuber_melanosporum_Vittad_   (Perigord truffle)   0
Hansenula_polymorpha_v2.0 0
Dekkera_bruxellensis_CBS_2499_v2.0 1
Pichia_membranifaciensv1.0 1
Candida_tanzawaensis_NRRL_Y-17324__v1.0 0
Candida_dubliniensis_CD36_ 0
Candida_tropicalis_MYA-3404_ 0
Candida_parapsilosis_ 0
Candida_albicans_SC5314 0
Lodderomyces_elongisporus_NRRL_YB-4239_ 1
Babjeviella_inositovora_NRRL_Y-12698_v1.0 1
Pichia_stipitis_CBS_6054_ 0
Candida_guilliermondii_ATCC_6260_ 0
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 0
Debaromyces_hansenii 0
Wickerhamomyces_anomalus 1
Pichia_pastoris_GS115_ 0
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 1
Yarrowia_lipolytica_CLIB122 0
Candida_lusitaniae_ATCC_42720_ 0
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 0
Vanderwaltozyma_polyspora_DSM_70294_ 0
Candida_glabrata_CBS138 0
Kluyveromyces_thermotolerans_CBS_6340 0
Lachancea_kluyveri_ 0
Kluyveromyces_waltii 0
Ashbya_gossypii_ATCC_10895_ 0
Zygosaccharomyces_rouxii_ 0
Saccharomyces_mikatae_MIT 0
Saccharomyces_paradoxus_MIT 0
Saccharomyces_cerevisiae_76   (Baker's yeast)   0
Saccharomyces_bayanus_MIT 1
Kluyveromyces_lactis 0
Schizosaccharomyces_cryophilus_OY26_22 1
Schizosaccharomyces_octosporus_yFS286_ 1
Schizosaccharomyces_japonicus_yFS275_ 1
Schizosaccharomyces_pombe   (Fission yeast)   1
Catenaria_anguillulae_PL171_v1.0 4
Allomyces_macrogynus_ATCC_38327_ 9
Spizellomyces_punctatus_DAOM_BR117_ 1
Dictyostelium_discoideum 4
Dictyostelium_purpureum_ 3
Entamoeba_dispar_1.2 9
Entamoeba_invadens_1.2 19
Entamoeba_histolytica_1 9
Selaginella_moellendorffii_ 2
Pinus_taeda   (Loblolly pine)   30
Picea_abies   (Norway spruce)   27
Eucalyptus_grandis_v201   (Rose gum)   12
Theobroma_cacao_B97-61/B2_v1   (Cacao)   7
Gossypium_raimondii_v221 12
Citrus_clementina_v165 5
Citrus_sinensis_v154   (Sweet orange)   4
Thellungiella_halophila_v173 10
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   8
Capsella_rubella_v183 6
Arabidopsis_lyrata_   (Lyrate rockcress)   4
Arabidopsis_thaliana_10   (Thale cress)   5
Carica_papaya_   (Papaya)   4
Medicago_truncatula_   (Barrel medic)   8
Phaseolus_vulgaris_v186   (French bean)   9
Glycine_max_v109   (Soybean)   11
Cucumis_sativus_v122   (Cucumber)   7
Fragaria_vesca_   (Wild strawberry)   7
Malus_domestica_v196   (Apple)   14
Prunus_persica_v139   (Peach)   3
Linum_usitatissimum_v200   (Flax)   21
Manihot_esculenta_v147   (Cassava)   7
Populus_trichocarpa_v156   (Black cottonwood)   9
Vitis_vinifera_   (Wine grape)   11
Mimulus_guttatus_v140   (Spotted monkey flower)   8
Solanum_lycopersicum_v.2.3   (Tomato)   6
Solanum_tuberosum_   (Potato)   6
Actinidia_chinensis_Hongyang_ 10
Aquilegia_coerulea_v195 8
Triticum_urartu_22 9
Triticum_aestivum_22   (Bread wheat)   15
Aegilops_tauschii_22 9
Brachypodium_distachyon_   (Stiff brome)   10
Oryza_barthii_22   (African wild rice)   11
Oryza_meridionalis_22 9
Oryza_glumaepatula_22 16
Oryza_glaberrima   (African rice)   9
Oryza_punctata_22 10
Oryza_nivara_22 20
Oryza_brachyantha_22   (Malo sina)   11
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   18
Oryza_sativa_v193   (Rice)   18
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   9
Panicum_virgatum_v202   (Switchgrass)   17
Setaria_italica_v164   (Foxtail millet)   10
Zea_mays_subsp._mays_   (Maize)   19
Zea_mays_v181   (Maize)   21
Sorghum_bicolor_   (Sorghum)   8
Musa_balbisiana   (Balbis banana)   21
Musa_acuminata_22   (Wild Malaysian banana)   18
Amborella_trichopoda_22 4
Physcomitrella_patens 3
Coccomyxa_subellipsoidea_sp._C-169_v2 0
Asterochloris_sp._Cgr/DA1pho_v1.0 0
Chlorella_variabilis_sp._NC64A_ 3
Chlorella_vulgaris_ 1
Volvox_carteri_f._nagariensis_ 5
Volvox_carteri_v199 4
Chlamydomonas_reinhardtii_4.0 1
Ostreococcus_sp._RCC809_ 1
Ostreococcus_lucimarinus_CCE9901_ 1
Ostreococcus_tauri_ 3
Bathycoccus_prasinos_ 3
Micromonas_sp._RCC299_ 1
Micromonas_pusilla_CCMP1545_v3.0 1
Cyanidioschyzon_merolae_strain_10D_22 1
Cyanidioschyzon_merolae 0
Porphyridium_purpureum_02_2012 0
Thecamonas_trahens_ATCC_50062_ 2
Bigelowiella_natans_CCMP2755_22 10
Giardia_lamblia_2.3 0
Cyanophora_paradoxa_ 6
Leishmania_mexicana_2.4 2
Leishmania_major_strain_Friedlin_ 2
Leishmania_infantum_JPCM5_2.4 2
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 2
Trypanosoma_vivax_ 3
Trypanosoma_cruzi_strain_CL_Brener 8
Trypanosoma_congolense_2.4 3
Trypanosoma_brucei_gambiense_v4.1 4
Trypanosoma_brucei_TREU927_v4.1 3
Ectocarpus_siliculosus 1
Aureococcus_anophagefferens_ 4
Albugo_laibachii_22 4
Pythium_iwayamai_DAOM_BR242034_22 7
Pythium_arrhenomanes_ATCC_12531_22 7
Pythium_ultimum_v1.7-2 7
Pythium_aphanidermatum_DAOM_BR444_22 6
Pythium_irregulare_DAOM_BR486_22 8
Pythium_vexans_DAOM_BR484_22 4
Phytophthora_ramorum_1.1   (Sudden oak death agent)   9
Phytophthora_sojae_1.1 7
Phytophthora_infestans_T30-4_ 9
Phytophthora_capsici_ 11
Hyaloperonospora_arabidopsidis_22 4
Phaeodactylum_tricornutumCCAP_1055/1 1
Fragilariopsis_cylindrus 2
Thalassiosira_pseudonana_CCMP1335 0
Perkinsus_marinus_ATCC_50983_ 0
Paramecium_tetraurelia_ 17
Tetrahymena_thermophila_SB210_1_ 5
Ichthyophthirius_multifiliis_strain_G5_ 0
Cryptosporidium_hominis 0
Cryptosporidium_muris 0
Cryptosporidium_parvum_Iowa_II 0
Neospora_caninum 0
Toxoplasma_gondii_VEG 1
Toxoplasma_gondii_ME49 1
Toxoplasma_gondii_GT1 1
Theileria_parva__ 0
Theileria_annulata 0
Plasmodium_falciparum_3D7_ 2
Plasmodium_vivax_SaI-1_7.0 1
Plasmodium_knowlesi_strain_H_ 1
Plasmodium_yoelii_ssp._yoelii_1_ 2
Plasmodium_chabaudi_ 1
Plasmodium_berghei_ANKA_ 1
Symbiodinium_minutum_clade_B1_v1.2 12
Naegleria_gruberi_ 11
Trichomonas_vaginalis_ 1
Guillardia_theta_CCMP2712_v1.0_ 6
Emiliania_huxleyi_CCMP1516_ 11
Leptolyngbya_sp._PCC_7376 0
Pseudanabaena_sp._PCC_7367 0
Synechocystis_sp._PCC_6803 0
Synechococcus_sp._PCC_6312 0
Microcoleus_sp._PCC_7113 0
Trichodesmium_erythraeum_IMS101 0
Gloeocapsa_sp._PCC_7428 0
Halothece_sp._PCC_7418 0
Rivularia_sp._PCC_7116 0
Anabaena_variabilis_ATCC_29413 1
Nostoc_punctiforme_PCC_73102 0
Nostoc_sp._PCC_7120 1
Nostoc_sp._PCC_7524 0
Conexibacter_woesei_DSM_14684 0
Eggerthella_lenta_DSM_2243 0
Acidimicrobium_ferrooxidans_DSM_10331 1
Nakamurella_multipartita_DSM_44233 0
Acidothermus_cellulolyticus_11B 0
Modestobacter_marinus 4
Geodermatophilus_obscurus_DSM_43160 0
Catenulispora_acidiphila_DSM_44928 2
Stackebrandtia_nassauensis_DSM_44728 2
Frankia_symbiont_of_Datisca_glomerata 1
Frankia_sp._EAN1pec 1
Frankia_alni_ACN14a 1
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 0
Streptosporangium_roseum_DSM_43021 1
Kitasatospora_setae_KM-6054 5
Streptomyces_coelicolor_A3(2) 0
Streptomyces_sp._PAMC26508 1
Streptomyces_flavogriseus_ATCC_33331 1
Streptomyces_sp._SirexAA-E 1
Streptomyces_griseus_subsp._griseus_NBRC_13350 2
Streptomyces_bingchenggensis_BCW-1 2
Streptomyces_violaceusniger_Tu_4113 2
Streptomyces_avermitilis_MA-4680 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 0
Streptomyces_scabiei_87.22 1
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 0
Actinosynnema_mirum_DSM_43827 3
Saccharomonospora_viridis_DSM_43017 0
Pseudonocardia_dioxanivorans_CB1190 1
Saccharopolyspora_erythraea_NRRL_2338 0
Amycolatopsis_mediterranei_U32 0
Kribbella_flavida_DSM_17836 2
Nocardioides_sp._JS614 2
Propionibacterium_acnes_SK137 0
Salinispora_arenicola_CNS-205 1
Salinispora_tropica_CNB-440 1
Verrucosispora_maris_AB-18-032 0
Micromonospora_sp._L5 1
Micromonospora_aurantiaca_ATCC_27029 0
Actinoplanes_sp._N902-109 1
Actinoplanes_sp._SE50/110 1
Actinoplanes_missouriensis_431 2
Gordonia_sp._KTR9 1
Mycobacterium_intracellulare_ATCC_13950 1
Mycobacterium_vanbaalenii_PYR-1 1
Mycobacterium_rhodesiae_NBB3 1
Mycobacterium_smegmatis_str._MC2_155 0
Corynebacterium_aurimucosum_ATCC_700975 0
Corynebacterium_glutamicum_R 0
Corynebacterium_diphtheriae_NCTC_13129 0
Beutenbergia_cavernae_DSM_12333 0
Microbacterium_testaceum_StLB037 0
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 0
Jonesia_denitrificans_DSM_20603 0
Isoptericola_variabilis_225 0
Xylanimonas_cellulosilytica_DSM_15894 0
Cellulomonas_flavigena_DSM_20109 1
Cellulomonas_fimi_ATCC_484 0
Renibacterium_salmoninarum_ATCC_33209 1
Bifidobacterium_dentium_Bd1 0
Bifidobacterium_breve_ACS-071-V-Sch8b 0
Actinomyces_sp._F0330 1
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 1
Dehalococcoides_ethenogenes_195 0
Dehalococcoides_sp._BAV1 1
Anaerolinea_thermophila_UNI-1 1
Herpetosiphon_aurantiacus_DSM_785 0
Roseiflexus_sp._RS-1 2
Roseiflexus_castenholzii_DSM_13941 0
Chloroflexus_sp._Y-400-fl 0
Chloroflexus_aggregans_DSM_9485 0
Chloroflexus_aurantiacus_J-10-fl 1
Meiothermus_ruber_DSM_1279 0
Thermus_sp._CCB_US3_UF1 1
Clostridium_clariflavum_DSM_19732 0
Clostridium_cellulolyticum_H10 0
Clostridium_thermocellum_ATCC_27405 0
Ethanoligenens_harbinense_YUAN-3 0
Pelotomaculum_thermopropionicum_SI 0
Desulfosporosinus_acidiphilus_SJ4 1
Desulfosporosinus_orientis_DSM_765 1
Syntrophobotulus_glycolicus_DSM_8271 1
Desulfotomaculum_acetoxidans_DSM_771 0
Clostridium_phytofermentans_ISDg 0
Clostridium_lentocellum_DSM_5427 0
Butyrivibrio_fibrisolvens 0
Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen 0
Heliobacterium_modesticaldum_Ice1 0
Clostridium_ljungdahlii_DSM_13528 1
Clostridium_kluyveri_DSM_555 1
Clostridium_perfringens_ATCC_13124 0
Clostridium_cellulovorans_743B 1
Clostridium_acetobutylicum_ATCC_824 0
Caldicellulosiruptor_obsidiansis_OB47 0
Caldicellulosiruptor_kronotskyensis_2002 0
Caldicellulosiruptor_hydrothermalis_108 0
Caldicellulosiruptor_saccharolyticus_DSM_8903 0
Thermoanaerobacter_mathranii_subsp._mathranii_str._A3 0
Melissococcus_plutonius_DAT561 0
Enterococcus_sp._7L76 0
Enterococcus_faecium_Aus0004 0
Enterococcus_faecalis_62 0
Leuconostoc_kimchii_IMSNU_11154 0
Lactobacillus_rhamnosus_Lc_705 0
Lactobacillus_plantarum_JDM1 0
Lactobacillus_brevis_ATCC_367 0
Pediococcus_claussenii_ATCC_BAA-344 0
Pediococcus_pentosaceus_ATCC_25745 1
Lactococcus_lactis_subsp._cremoris_MG1363 0
Streptococcus_intermedius_JTH08 0
Streptococcus_equi_subsp._equi_4047 0
Streptococcus_mitis_B6 0
Streptococcus_parasanguinis_ATCC_15912 0
Streptococcus_pneumoniae_P1031 0
Streptococcus_sanguinis_SK36 1
Streptococcus_salivarius_57.I 0
Streptococcus_oralis_Uo5 0
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 1
Paenibacillus_sp._JDR-2 0
Paenibacillus_terrae_HPL-003 1
Paenibacillus_mucilaginosus_3016 0
Paenibacillus_polymyxa_M1 1
Bacillus_selenitireducens_MLS10 1
Listeria_welshimeri_serovar_6b_str._SLCC5334 0
Solibacillus_silvestris_StLB046 1
Halobacillus_halophilus_DSM_2266 0
Bacillus_halodurans_C-125 0
Bacillus_pseudofirmus_OF4 0
Bacillus_cellulosilyticus_DSM_2522 1
Staphylococcus_epidermidis_RP62A 0
Staphylococcus_aureus_subsp._aureus_JH1 0
Staphylococcus_aureus 0
Candidatus_Cloacamonas_acidaminovorans 0
Ignavibacterium_album_JCM_16511 0
Pelodictyon_phaeoclathratiforme_BU-1 0
Chlorobium_luteolum_DSM_273 0
Chlorobium_phaeovibrioides_DSM_265 0
Chloroherpeton_thalassium_ATCC_35110 0
Haliscomenobacter_hydrossis_DSM_1100 1
Niastella_koreensis_GR20-10 0
Chitinophaga_pinensis_DSM_2588 1
Salinibacter_ruber_M8 0
Rhodothermus_marinus_DSM_4252 0
Flexibacter_litoralis_DSM_6794 0
Cyclobacterium_marinum_DSM_745 2
Marivirga_tractuosa_DSM_4126 0
Fibrella_aestuarina 3
Dyadobacter_fermentans_DSM_18053 0
Cytophaga_hutchinsonii_ATCC_33406 1
Spirosoma_linguale_DSM_74 2
Runella_slithyformis_DSM_19594 0
Parabacteroides_distasonis_ATCC_8503 0
Paludibacter_propionicigenes_WB4 1
Odoribacter_splanchnicus_DSM_20712 1
Prevotella_melaninogenica_ATCC_25845 2
Prevotella_denticola_F0289 2
Prevotella_ruminicola_23 1
Alistipes_finegoldii_DSM_17242 8
Bacteroides_salanitronis_DSM_18170 1
Bacteroides_helcogenes_P_36-108 4
Bacteroides_vulgatus_ATCC_8482 1
Bacteroides_thetaiotaomicron_VPI-5482 10
Bacteroides_fragilis_YCH46 3
Pedobacter_saltans_DSM_12145 1
Pedobacter_heparinus_DSM_2366 1
Sphingobacterium_sp._21 2
Fluviicola_taffensis_DSM_16823 2
Owenweeksia_hongkongensis_DSM_17368 0
Zunongwangia_profunda_SM-A87 0
Krokinobacter_sp._4H-3-7-5 1
Gramella_forsetii_KT0803 3
Lacinutrix_sp._5H-3-7-4 2
Maribacter_sp._HTCC2170 1
Robiginitalea_biformata_HTCC2501 0
Croceibacter_atlanticus_HTCC2559 2
Aequorivita_sublithincola_DSM_14238 2
Zobellia_galactanivorans 6
Muricauda_ruestringensis_DSM_13258 0
Cellulophaga_algicola_DSM_14237 6
Cellulophaga_lytica_DSM_7489 6
Flavobacteriaceae_bacterium_3519-10 1
Polaribacter_sp._MED152 2
Ornithobacterium_rhinotracheale_DSM_15997 3
Capnocytophaga_canimorsus_Cc5 0
Capnocytophaga_ochracea_DSM_7271 2
Weeksella_virosa_DSM_16922 2
Flavobacterium_indicum_GPTSA100-9 0
Flavobacterium_branchiophilum_FL-15 1
Flavobacterium_columnare_ATCC_49512 0
Flavobacterium_johnsoniae_UW101 2
Fibrobacter_succinogenes_subsp._succinogenes_S85 3
Phycisphaera_mikurensis_NBRC_102666 1
Planctomyces_brasiliensis_DSM_5305 8
Planctomyces_limnophilus_DSM_3776 1
Rhodopirellula_baltica_SH_1 7
Pirellula_staleyi_DSM_6068 1
Coraliomargarita_akajimensis_DSM_45221 8
Opitutus_terrae_PB90-1 0
Akkermansia_muciniphila_ATCC_BAA-835 0
Turneriella_parva_DSM_21527 3
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 1
Brachyspira_intermedia_PWS/A 0
Borrelia_recurrentis_A1 0
Borrelia_duttonii_Ly 0
Borrelia_crocidurae_str._Achema 0
Borrelia_hermsii_DAH 0
Spirochaeta_smaragdinae_DSM_11293 0
Spirochaeta_caldaria_DSM_7334 0
Treponema_primitia_ZAS-2 0
Treponema_brennaborense_DSM_12168 0
Treponema_paraluiscuniculi_Cuniculi_A 0
Treponema_pallidum_subsp._pallidum_SS14 0
Treponema_denticola_ATCC_35405 0
Spirochaeta_africana_DSM_8902 0
Spirochaeta_thermophila_DSM_6192 0
Thermodesulfatator_indicus_DSM_15286 1
Desulfurispirillum_indicum_S5 0
Calditerrivibrio_nitroreducens_DSM_19672 0
Denitrovibrio_acetiphilus_DSM_12809 0
Deferribacter_desulfuricans_SSM1 0
Mesotoga_prima_MesG1.Ag.4.2 0
Thermosipho_melanesiensis_BI429 1
Thermotoga_naphthophila_RKU-10 1
Thermotoga_petrophila_RKU-1 1
Elusimicrobium_minutum_Pei191 1
Candidatus_Solibacter_usitatus_Ellin6076 2
Granulicella_tundricola_MP5ACTX9 3
Granulicella_mallensis_MP5ACTX8 0
Candidatus_Koribacter_versatilis_Ellin345 1
Terriglobus_saanensis_SP1PR4 1
Acidobacterium_capsulatum_ATCC_51196 0
Leptotrichia_buccalis_C-1013-b 1
candidate_division_WWE3_bacterium_RAAC2_WWE3_1 0
candidate_division_SR1_bacterium_RAAC1_SR1_1 0
Candidatus_Saccharimonas_aalborgensis 0
Bdellovibrio_bacteriovorus_HD100 1
Nautilia_profundicola_AmH 1
Nitratifractor_salsuginis_DSM_16511 0
uncultured_Sulfuricurvum_sp._RIFRC-1 0
Sulfuricurvum_kujiense_DSM_16994 0
Sulfurimonas_autotrophica_DSM_16294 0
Nitratiruptor_sp._SB155-2 0
Desulfarculus_baarsii_DSM_2075 0
Desulfobacca_acetoxidans_DSM_11109 0
Desulfatibacillum_alkenivorans_AK-01 0
Desulfovibrio_magneticus_RS-1 0
Geobacter_uraniireducens_Rf4 0
Geobacter_lovleyi_SZ 0
Geobacter_metallireducens_GS-15 0
Pelobacter_carbinolicus_DSM_2380 0
Haliangium_ochraceum_DSM_14365 5
Sorangium_cellulosum_'So_ce_56' 10
Anaeromyxobacter_sp._Fw109-5 0
Stigmatella_aurantiaca_DW4/3-1 3
Corallococcus_coralloides_DSM_2259 1
Myxococcus_xanthus_DK_1622 0
Myxococcus_fulvus_HW-1 0
Dechloromonas_aromatica_RCB 0
Dechlorosoma_suillum_PS 0
Pseudogulbenkiania_sp._NH8B 0
Chromobacterium_violaceum_ATCC_12472 0
Methylibium_petroleiphilum_PM1 1
Thiomonas_arsenitoxydans 0
Leptothrix_cholodnii_SP-6 0
Burkholderia_rhizoxinica_HKI_454 0
Burkholderia_xenovorans_LB400 0
Cupriavidus_taiwanensis_LMG_19424 0
Cupriavidus_metallidurans_CH34 0
Cupriavidus_necator_N-1 1
Ralstonia_solanacearum_CFBP2957 0
Burkholderia_ambifaria_AMMD 0
Burkholderia_cenocepacia_HI2424 0
Burkholderia_multivorans_ATCC_17616 1
Burkholderia_vietnamiensis_G4 5
Burkholderia_gladioli_BSR3 1
Burkholderia_glumae_BGR1 0
Verminephrobacter_eiseniae_EF01-2 0
Alicycliphilus_denitrificans_K601 2
Ramlibacter_tataouinensis_TTB310 0
Delftia_sp._Cs1-4 1
Delftia_acidovorans_SPH-1 0
Variovorax_paradoxus_S110 0
Rhodoferax_ferrireducens_T118 1
Acidovorax_citrulli_AAC00-1 0
Herminiimonas_arsenicoxydans 0
Collimonas_fungivorans_Ter331 0
Janthinobacterium_sp._Marseille 0
Pusillimonas_sp._T7-7 0
Achromobacter_xylosoxidans 0
Thiobacillus_denitrificans_ATCC_25259 0
Nitrosospira_multiformis_ATCC_25196 0
Sideroxydans_lithotrophicus_ES-1 0
Methylotenera_versatilis_301 0
Methylobacillus_flagellatus_KT 0
Magnetococcus_marinus_MC-1 0
Asticcacaulis_excentricus_CB_48 1
Caulobacter_sp._K31 1
Sphingobium_japonicum_UT26S 1
Sphingobium_chlorophenolicum_L-1 1
Sphingomonas_sp._MM-1 0
Sphingomonas_wittichii_RW1 2
Roseobacter_litoralis_Och_149 0
Roseobacter_denitrificans_OCh_114 0
Rhodobacter_sphaeroides_ATCC_17029 6
Magnetospirillum_magneticum_AMB-1 0
Azospirillum_lipoferum_4B 1
Azospirillum_sp._B510 0
Micavibrio_aeruginosavorus_ARL-13 2
Candidatus_Puniceispirillum_marinum_IMCC1322 0
alpha_proteobacterium_HIMB5 0
Methylobacterium_sp._4-46 0
Methylobacterium_populi_BJ001 0
Methylobacterium_nodulans_ORS_2060 2
Methylobacterium_radiotolerans_JCM_2831 1
Agrobacterium_radiobacter_K84 1
Mesorhizobium_opportunistum_WSM2075 1
Beijerinckia_indica_subsp._indica_ATCC_9039 1
Rhodopseudomonas_palustris_BisA53 0
Bradyrhizobium_japonicum_USDA_110 1
Bradyrhizobium_sp._ORS_278 0
Saccharophagus_degradans_2-40 2
Teredinibacter_turnerae_T7901 0
Cellvibrio_japonicus_Ueda107 1
Aeromonas_veronii_B565 0
Aeromonas_salmonicida_subsp._salmonicida_A449 0
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 0
Aliivibrio_salmonicida_LFI1238 0
Vibrio_fischeri_MJ11 0
Vibrio_sp._Ex25 0
Vibrio_splendidus_LGP32 0
Vibrio_anguillarum_775 0
Vibrio_vulnificus_MO6-24/O 0
Vibrio_cholerae_O395 0
Psychromonas_ingrahamii_37 0
Idiomarina_loihiensis_L2TR 0
Shewanella_piezotolerans_WP3 0
Shewanella_denitrificans_OS217 0
Shewanella_oneidensis_MR-1 0
Shewanella_baltica_OS185 0
Shewanella_woodyi_ATCC_51908 1
Shewanella_sp._MR-4 0
Shewanella_frigidimarina_NCIMB_400 0
Shewanella_putrefaciens_CN-32 0
Colwellia_psychrerythraea_34H 1
Pseudoalteromonas_sp._SM9913 1
Pseudoalteromonas_atlantica_T6c 3
Pseudoalteromonas_haloplanktis_TAC125 0
Glaciecola_sp._4H-3-7+YE-5 3
Glaciecola_nitratireducens_FR1064 0
Marinobacter_adhaerens_HP15 0
Marinobacter_hydrocarbonoclasticus_ATCC_49840 0
Marinobacter_aquaeolei_VT8 0
Alteromonas_sp._SN2 0
Alteromonas_macleodii_str._'Deep_ecotype' 0
Hahella_chejuensis_KCTC_2396 1
Marinomonas_mediterranea_MMB-1 0
Methylomicrobium_alcaliphilum 0
Methylomonas_methanica_MC09 0
Methylococcus_capsulatus_str._Bath 0
Rhodanobacter_denitrificans 0
Pseudoxanthomonas_suwonensis_11-1 1
Stenotrophomonas_maltophilia_K279a 0
Xanthomonas_oryzae_pv._oryzae_PXO99A 1
Thioalkalivibrio_sulfidophilus_HL-EbGr7 0
Nitrosococcus_halophilus_Nc4 2
Legionella_longbeachae_NSW150 0
Rahnella_sp._Y9602 0
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 0
Klebsiella_variicola_At-22 3
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 1
Pseudomonas_sp._TKP 0
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 0
Pseudomonas_entomophila_L48 0
Pseudomonas_protegens_Pf-5 0
Pseudomonas_fluorescens_SBW25 0
Pseudomonas_aeruginosa_UCBPP-PA14 0
Nanoarchaeum_equitans_Kin4-M 0
Candidatus_Nitrosopumilus_sp._AR2 0
Candidatus_Korarchaeum_cryptofilum_OPF8 0
Acidilobus_saccharovorans_345-15 0
Ignisphaera_aggregans_DSM_17230 2
Ignicoccus_hospitalis_KIN4/I 1
Metallosphaera_cuprina_Ar-4 1
Acidianus_hospitalis_W1 0
Sulfolobus_islandicus_Y.N.15.51 4
Sulfolobus_solfataricus_P2 3
Sulfolobus_acidocaldarius_DSM_639 1
Thermofilum_pendens_Hrk_5 1
Vulcanisaeta_distributa_DSM_14429 1
Caldivirga_maquilingensis_IC-167 2
Thermoproteus_uzoniensis_768-20 1
Methanocella_paludicola_SANAE 0
Methanosaeta_harundinacea_6Ac 0
Methanosaeta_concilii_GP6 0
Methanococcoides_burtonii_DSM_6242 0
Methanosarcina_acetivorans_C2A 0
Methanoregula_boonei_6A8 1
Methanospirillum_hungatei_JF-1 1
Methanocorpusculum_labreanum_Z 1
Methanoculleus_marisnigri_JR1 1
Archaeoglobus_profundus_DSM_5631 1
Archaeoglobus_fulgidus_DSM_4304 1
Thermococcus_kodakarensis_KOD1 0
Thermococcus_gammatolerans_EJ3 0
Thermococcus_sibiricus_MM_739 1
Pyrococcus_furiosus_COM1 1
Halopiger_xanaduensis_SH-6 0
Halogeometricum_borinquense_DSM_11551 0
Haloferax_mediterranei_ATCC_33500 1
Halorhabdus_utahensis_DSM_12940 2
Haloarcula_hispanica_ATCC_33960 1
Methanocaldococcus_sp._FS406-22 0
Methanocaldococcus_vulcanius_M7 0
Methanocaldococcus_jannaschii_DSM_2661 0
Acholeplasma_laidlawii_PG-8A 0

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   21
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   11
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   6
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   3
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   5
Cryptococcus_neoformans_var._grubii_H99_ 3
Cryptococcus_neoformans_B-3501A_ 2
Cryptococcus_neoformans_JEC21_ 2
Paracoccidioides_brasiliensis_Pb01_ 1
Paracoccidioides_brasiliensis_Pb03_ 2
Coccidioides_posadasii_str._Silveira_ 1
Coccidioides_immitis_RMSCC_3703_ 2
Coccidioides_immitis_RMSCC_2394_ 1
Coccidioides_immitis_H538.4_ 1
Ajellomyces_dermatitidis_ER-3_ 3
Histoplasma_capsulatum_H143 2
Histoplasma_capsulatum_H88 1
Histoplasma_capsulatum_G186AR 1
Aspergillus_fumigatus_A1163_ 4
Candida_albicans_WO-1_ 0
Saccharomyces_cerevisiae_UC5 0
Saccharomyces_cerevisiae_PW5 0
Saccharomyces_cerevisiae_FL100 0
Saccharomyces_cerevisiae_CLIB324 1
Saccharomyces_cerevisiae_CBS7960 0
Saccharomyces_cerevisiae_YJM269 0
Saccharomyces_cerevisiae_T7 0
Saccharomyces_cerevisiae_FostersB 0
Saccharomyces_cerevisiae_FostersO 0
Saccharomyces_cerevisiae_VL3 1
Saccharomyces_cerevisiae_Vin13 1
Saccharomyces_cerevisiae_LalvinQA23 1
Saccharomyces_cerevisiae_AWRI796 2
Saccharomyces_cerevisiae_Sigma1278b 0
Saccharomyces_cerevisiae_W303 0
Saccharomyces_cerevisiae_JAY291 0
Saccharomyces_cerevisiae_AWRI1631 0
Saccharomyces_cerevisiae_YPS163 0
Saccharomyces_cerevisiae_M22 0
Saccharomyces_cerevisiae_T73 0
Saccharomyces_cerevisiae_CLIB215 0
Saccharomyces_cerevisiae_Y10 0
Saccharomyces_cerevisiae_YJM789_ 0
Saccharomyces_cerevisiae_YJM789 0
Saccharomyces_cerevisiae_RM11-1a 0
Saccharomyces_cerevisiae_RM11-1a_ 0
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   0
Schizosaccharomyces_pombe_972h-_ 1
Batrachochytrium_dendrobatidis_JEL423_ 1
Batrachochytrium_dendrobatidis_JAM81_ 1
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   8
Hordeum_vulgare_22   (Domesticated barley)   16
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   16
Trypanosoma_brucei_Lister_427_v4.1 3
Neospora_caninum_Nc-Liverpool_6.2 0
Plasmodium_falciparum_HB3_ 2
Plasmodium_falciparum_Dd2_ 1
Chroococcidiopsis_thermalis_PCC_7203 1
Synechocystis_sp._PCC_6803_substr._PCC-P 0
Synechocystis_sp._PCC_6803_substr._PCC-N 0
Synechocystis_sp._PCC_6803_substr._GT-I 0
Synechocystis_sp._PCC_6803 0
Dactylococcopsis_salina_PCC_8305 0
Oscillatoria_nigro-viridis_PCC_7112 0
Oscillatoria_acuminata_PCC_6304 0
Arthrospira_platensis_NIES-39 3
Cyanothece_sp._PCC_7822 0
Cyanothece_sp._ATCC_51142 0
Cyanobacterium_aponinum_PCC_10605 0
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 0
Stanieria_cyanosphaera_PCC_7437 0
Cylindrospermum_stagnale_PCC_7417 0
Anabaena_cylindrica_PCC_7122 0
Gordonibacter_pamelaeae_7-10-1-b 0
Frankia_sp._EuI1c 6
Frankia_sp._CcI3 1
Nocardiopsis_alba_ATCC_BAA-2165 0
Streptomyces_albus_J1074 0
Streptomyces_rapamycinicus_NRRL_5491 1
Streptomyces_davawensis_JCM_4913 0
Streptomyces_fulvissimus_DSM_40593 1
Streptomyces_venezuelae_ATCC_10712 0
Streptomyces_collinus_Tu_365 0
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 0
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 0
Saccharothrix_espanaensis_DSM_44229 0
Amycolatopsis_mediterranei_RB 0
Amycolatopsis_mediterranei_S699 0
Amycolatopsis_mediterranei_S699 0
Amycolatopsis_orientalis_HCCB10007 0
Propionibacterium_acnes_ATCC_11828 0
Propionibacterium_acnes_TypeIA2_P.acn31 0
Propionibacterium_acnes_TypeIA2_P.acn17 0
Propionibacterium_acnes_TypeIA2_P.acn33 0
Propionibacterium_acnes_C1 0
Propionibacterium_acnes_HL096PA1 0
Propionibacterium_acnes_6609 0
Propionibacterium_acnes_266 0
Propionibacterium_acnes_KPA171202 0
Propionibacterium_acidipropionici_ATCC_4875 0
Actinoplanes_friuliensis_DSM_7358 1
Mycobacterium_sp._MOTT36Y 1
Mycobacterium_yongonense_05-1390 1
Mycobacterium_intracellulare_MOTT-64 1
Mycobacterium_indicus_pranii_MTCC_9506 1
Mycobacterium_intracellulare_MOTT-02 1
Mycobacterium_smegmatis_str._MC2_155 0
Corynebacterium_maris_DSM_45190 1
Corynebacterium_halotolerans_YIM_70093_=_DSM_44683 0
Corynebacterium_glutamicum_MB001 0
Corynebacterium_glutamicum_SCgG2 0
Corynebacterium_glutamicum_SCgG1 0
Corynebacterium_glutamicum_ATCC_13032 0
Corynebacterium_glutamicum_ATCC_13032 0
Corynebacterium_glutamicum_ATCC_13032 0
Corynebacterium_diphtheriae_BH8 0
Corynebacterium_diphtheriae_INCA_402 0
Corynebacterium_diphtheriae_VA01 0
Corynebacterium_diphtheriae_HC04 0
Corynebacterium_diphtheriae_HC03 0
Corynebacterium_diphtheriae_HC02 0
Corynebacterium_diphtheriae_HC01 0
Corynebacterium_diphtheriae_241 0
Corynebacterium_diphtheriae_CDCE_8392 0
Corynebacterium_diphtheriae_PW8 0
Corynebacterium_diphtheriae_C7_(beta) 0
Corynebacterium_diphtheriae_31A 0
Leifsonia_xyli_subsp._cynodontis_DSM_46306 2
Clavibacter_michiganensis_subsp._sepedonicus 1
Clavibacter_michiganensis_subsp._nebraskensis_NCPPB_2581 0
Gardnerella_vaginalis_HMP9231 0
Gardnerella_vaginalis_ATCC_14019 0
Bifidobacterium_longum_subsp._infantis_157F 0
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 0
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 0
Bifidobacterium_longum_subsp._longum_BBMN68 0
Bifidobacterium_longum_subsp._longum_JCM_1217 0
Bifidobacterium_breve_UCC2003 0
Bifidobacterium_bifidum_PRL2010 0
Bifidobacterium_bifidum_BGN4 0
Actinomyces_viscosus_C505 0
Dehalococcoides_sp._GT 1
Dehalococcoides_sp._CBDB1 1
Chthonomonas_calidirosea_T49 0
Clostridium_thermocellum_DSM_1313 0
Clostridium_autoethanogenum_DSM_10061 1
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 0
Clostridium_kluyveri_NBRC_12016 1
Clostridium_perfringens_str._13 0
Clostridium_pasteurianum_BC1 1
Clostridium_botulinum_BKT015925 0
Clostridium_botulinum_B1_str._Okra 0
Clostridium_botulinum_A2_str._Kyoto 0
Clostridium_botulinum_A3_str._Loch_Maree 0
Clostridium_acetobutylicum_DSM_1731 0
Clostridium_acetobutylicum_EA_2018 0
Thermoanaerobacterium_saccharolyticum_JW/SL-YS485 1
Halobacteroides_halobius_DSM_5150 1
Carnobacterium_maltaromaticum_LMA28 0
Melissococcus_plutonius_ATCC_35311 1
Enterococcus_mundtii_QU_25 0
Enterococcus_casseliflavus_EC20 0
Enterococcus_faecium_NRRL_B-2354 0
Enterococcus_faecium_DO 0
Enterococcus_faecalis_str._Symbioflor_1 0
Enterococcus_faecalis_D32 0
Enterococcus_faecalis_OG1RF 0
Enterococcus_faecalis_V583 0
Lactobacillus_paracasei_subsp._paracasei_8700:2 0
Lactobacillus_casei_W56 0
Lactobacillus_rhamnosus_LOCK908 0
Lactobacillus_rhamnosus_ATCC_8530 0
Lactobacillus_plantarum_ZJ316 0
Lactobacillus_plantarum_subsp._plantarum_ST-III 0
Lactobacillus_plantarum_WCFS1 0
Lactobacillus_helveticus_R0052 0
Lactobacillus_delbrueckii_subsp._bulgaricus_ND02 0
Lactobacillus_brevis_KB290 0
Lactococcus_lactis_subsp._lactis_KLDS_4.0325 0
Lactococcus_lactis_subsp._lactis_CV56 0
Lactococcus_lactis_subsp._lactis_KF147 0
Lactococcus_lactis_subsp._cremoris_KW2 0
Lactococcus_lactis_subsp._cremoris_NZ9000 0
Streptococcus_intermedius_B196 0
Streptococcus_intermedius_C270 0
Streptococcus_equi_subsp._zooepidemicus_ATCC_35246 0
Streptococcus_equi_subsp._zooepidemicus_MGCS10565 0
Streptococcus_equi_subsp._zooepidemicus 0
Streptococcus_oligofermentans_AS_1.3089 0
Streptococcus_iniae_SF1 0
Streptococcus_pneumoniae_A026 0
Streptococcus_pneumoniae_ST556 0
Streptococcus_pneumoniae_SPNA45 0
Streptococcus_pneumoniae_SPN994039 0
Streptococcus_pneumoniae_SPN994038 0
Streptococcus_pneumoniae_SPN034183 0
Streptococcus_pneumoniae_SPN034156 0
Streptococcus_pneumoniae_INV104 0
Streptococcus_pneumoniae_INV200 0
Streptococcus_pneumoniae_OXC141 0
Streptococcus_pneumoniae_gamPNI0373 0
Streptococcus_pneumoniae_AP200 0
Streptococcus_pneumoniae_ATCC_700669 0
Streptococcus_pneumoniae_TCH8431/19A 0
Streptococcus_pneumoniae_CGSP14 0
Streptococcus_pneumoniae_G54 0
Streptococcus_pneumoniae_JJA 0
Streptococcus_pneumoniae_70585 0
Streptococcus_pneumoniae_Hungary19A-6 0
Streptococcus_pneumoniae_Taiwan19F-14 0
Streptococcus_pneumoniae_D39 0
Streptococcus_pneumoniae_670-6B 0
Streptococcus_pneumoniae_R6 0
Streptococcus_pneumoniae_TIGR4 0
Streptococcus_suis_D9 0
Streptococcus_salivarius_CCHSS3 0
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_Tc-4-1 1
Thermobacillus_composti_KWC4 0
Paenibacillus_sp._Y412MC10 0
Paenibacillus_mucilaginosus_KNP414 0
Paenibacillus_mucilaginosus_K02 0
Paenibacillus_polymyxa_CR1 1
Paenibacillus_polymyxa_SC2 1
Paenibacillus_polymyxa_E681 1
Geobacillus_sp._Y412MC52 0
Geobacillus_sp._Y412MC61 0
Bacillus_thuringiensis_serovar_finitimus_YBT-020 0
Bacillus_cereus_AH187 0
Bacillus_cereus_G9842 0
Bacillus_cereus_Q1 0
Bacillus_cereus_NC7401 0
Staphylococcus_aureus_subsp._aureus_MSHR1132 0
Staphylococcus_pasteuri_SP1 0
Staphylococcus_warneri_SG1 0
Staphylococcus_aureus_CA-347 0
Staphylococcus_aureus_Bmb9393 0
Staphylococcus_aureus_M1 0
Staphylococcus_aureus_08BA02176 0
Staphylococcus_aureus_ST228/18412 0
Staphylococcus_aureus_ST228/18341 0
Staphylococcus_aureus_ST228/16125 0
Staphylococcus_aureus_ST228/16035 0
Staphylococcus_aureus_ST228/15532 0
Staphylococcus_aureus_ST228/10497 0
Staphylococcus_aureus_ST228/10388 0
Staphylococcus_aureus_04-02981 0
Staphylococcus_aureus_subsp._aureus_Z172 0
Staphylococcus_aureus_subsp._aureus_6850 0
Staphylococcus_aureus_subsp._aureus_SA957 0
Staphylococcus_aureus_subsp._aureus_CN1 0
Staphylococcus_aureus_subsp._aureus_SA40 0
Staphylococcus_aureus_subsp._aureus_11819-97 0
Staphylococcus_aureus_subsp._aureus_M013 0
Staphylococcus_aureus_subsp._aureus_VC40 0
Staphylococcus_aureus_subsp._aureus_T0131 0
Staphylococcus_aureus_subsp._aureus_LGA251 0
Staphylococcus_aureus_subsp._aureus_ECT-R_2 0
Staphylococcus_aureus_subsp._aureus_JKD6159 0
Staphylococcus_aureus_subsp._aureus_ED133 0
Staphylococcus_aureus_subsp._aureus_ED98 0
Staphylococcus_aureus_subsp._aureus_TW20 0
Staphylococcus_aureus_subsp._aureus_55/2053 0
Staphylococcus_aureus_subsp._aureus_TCH60 0
Staphylococcus_aureus_subsp._aureus_str._JKD6008 0
Staphylococcus_aureus_subsp._aureus_71193 0
Staphylococcus_aureus_subsp._aureus_S0385 0
Staphylococcus_aureus_subsp._aureus_str._Newman 0
Staphylococcus_aureus_subsp._aureus_Mu3 0
Staphylococcus_aureus_subsp._aureus_USA300_TCH1516 0
Staphylococcus_aureus_subsp._aureus_USA300_FPR3757 0
Staphylococcus_aureus_subsp._aureus_JH9 0
Staphylococcus_aureus_subsp._aureus_MSSA476 0
Staphylococcus_aureus_subsp._aureus_MRSA252 0
Staphylococcus_aureus_subsp._aureus_MW2 0
Staphylococcus_aureus_subsp._aureus_N315 0
Staphylococcus_aureus_subsp._aureus_Mu50 0
Staphylococcus_aureus_subsp._aureus_COL 0
Staphylococcus_aureus_subsp._aureus_NCTC_8325 0
Salinibacter_ruber_DSM_13855 0
Rhodothermus_marinus_SG0.5JP17-172 0
Echinicola_vietnamensis_DSM_17526 2
Emticicia_oligotrophica_DSM_17448 0
Prevotella_sp._oral_taxon_299_str._F0039 2
Prevotella_dentalis_DSM_3688 0
Alistipes_shahii_WAL_8301 4
Bacteroides_xylanisolvens_XB1A 9
Bacteroides_fragilis_638R 2
Bacteroides_fragilis_NCTC_9343 2
Nonlabens_dokdonensis_DSW-6 1
Psychroflexus_torquis_ATCC_700755 0
Riemerella_anatipestifer_RA-CH-1 0
Fibrobacter_succinogenes_subsp._succinogenes_S85 3
Singulisphaera_acidiphila_DSM_18658 6
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 0
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 1
Brachyspira_pilosicoli_WesB 0
Brachyspira_pilosicoli_B2904 0
Brachyspira_pilosicoli_P43/6/78 0
Borrelia_garinii_NMJW1 0
Borrelia_miyamotoi_LB-2001 0
Treponema_pedis_str._T_A4 0
Treponema_pallidum_str._Fribourg-Blanc 0
Treponema_pallidum_subsp._pertenue_str._Gauthier 0
Treponema_pallidum_subsp._pertenue_str._CDC2 0
Treponema_pallidum_subsp._pertenue_str._SamoaD 0
Treponema_pallidum_subsp._pallidum_DAL-1 0
Treponema_pallidum_subsp._pallidum_str._Nichols 0
Spirochaeta_thermophila_DSM_6578 1
Bdellovibrio_bacteriovorus_str._Tiberius 0
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 0
Desulfovibrio_gigas_DSM_1382_=_ATCC_19364 1
Geobacter_sp._M18 0
Sorangium_cellulosum_So0157-2 8
Myxococcus_stipitatus_DSM_14675 2
Ralstonia_solanacearum_FQY_4 0
Ralstonia_solanacearum_Po82 0
Ralstonia_solanacearum_PSI07 0
Ralstonia_solanacearum_CMR15 0
Ralstonia_solanacearum_GMI1000 0
Burkholderia_sp._YI23 1
Burkholderia_sp._KJ006 0
Burkholderia_thailandensis_MSMB121 0
Burkholderia_pseudomallei_1710b 0
Burkholderia_lata 0
Burkholderia_ambifaria_MC40-6 0
Burkholderia_cenocepacia_MC0-3 0
Burkholderia_cenocepacia_AU_1054 0
Burkholderia_cenocepacia_J2315 0
Burkholderia_multivorans_ATCC_17616 1
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 0
Variovorax_paradoxus_B4 0
Variovorax_paradoxus_EPS 0
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 0
Sulfuricella_denitrificans_skB26 0
Rhodobacter_sphaeroides_KD131 2
Rhodobacter_sphaeroides_ATCC_17025 1
Rhodobacter_sphaeroides_2.4.1 2
Magnetospirillum_gryphiswaldense_MSR-1_v2 0
Micavibrio_aeruginosavorus_EPB 1
Sinorhizobium_fredii_USDA_257 1
Sinorhizobium_fredii_HH103 1
Rhizobium_tropici_CIAT_899 1
Mesorhizobium_australicum_WSM2073 1
Rhodopseudomonas_palustris_HaA2 0
Rhodopseudomonas_palustris_BisB18 0
Rhodopseudomonas_palustris_CGA009 0
Bradyrhizobium_sp._S23321 2
Bradyrhizobium_sp._BTAi1 0
Bradyrhizobium_oligotrophicum_S58 0
Bradyrhizobium_japonicum_USDA_6 1
Simiduia_agarivorans_SA1_=_DSM_21679 0
Aeromonas_hydrophila_ML09-119 0
Vibrio_fischeri_ES114 0
Vibrio_alginolyticus_NBRC_15630_=_ATCC_17749 2
Vibrio_anguillarum_Listonella_anguillarum_M3 0
Vibrio_vulnificus_CMCP6 0
Vibrio_vulnificus_YJ016 0
Vibrio_cholerae_LMA3984-4 0
Vibrio_cholerae_M66-2 0
Vibrio_cholerae_O395 0
Vibrio_cholerae_IEC224 0
Vibrio_cholerae_O1_str._2010EL-1786 0
Vibrio_cholerae_MJ-1236 0
Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 0
Idiomarina_loihiensis_GSL_199 0
Shewanella_sp._W3-18-1 0
Shewanella_sp._ANA-3 0
Shewanella_baltica_BA175 0
Shewanella_baltica_OS678 0
Shewanella_baltica_OS117 0
Shewanella_baltica_OS223 0
Shewanella_baltica_OS195 0
Shewanella_baltica_OS155 0
Shewanella_sp._MR-7 0
Shewanella_putrefaciens_200 0
Glaciecola_psychrophila_170 0
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 1
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 1
Alteromonas_macleodii_str._'English_Channel_615' 1
Alteromonas_macleodii_AltDE1 1
Alteromonas_macleodii_str._'English_Channel_673' 0
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 0
Alteromonas_macleodii_str._'Black_Sea_11' 0
Alteromonas_macleodii_ATCC_27126 0
Alcanivorax_dieselolei_B5 1
Stenotrophomonas_maltophilia_D457 0
Stenotrophomonas_maltophilia_JV3 0
Stenotrophomonas_maltophilia_R551-3 0
Rahnella_aquatilis_HX2 0
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 0
Klebsiella_oxytoca_KCTC_1686 0
Escherichia_coli_JJ1886 0
Escherichia_coli_O7:K1_str._CE10 1
Escherichia_coli_NA114 1
Escherichia_coli_str._'clone_D_i2' 0
Escherichia_coli_str._'clone_D_i14' 0
Escherichia_coli_UM146 0
Escherichia_coli_IHE3034 0
Escherichia_coli_O83:H1_str._NRG_857C 0
Escherichia_coli_ABU_83972 0
Escherichia_coli_LF82 0
Escherichia_coli_S88 0
Escherichia_coli_BL21(DE3) 1
Escherichia_coli_BL21(DE3) 1
Escherichia_coli_APEC_O1 0
Escherichia_coli_UTI89 0
Escherichia_coli_536 0
Escherichia_coli_B_str._REL606 0
Pseudomonas_stutzeri_CCUG_29243 0
Pseudomonas_stutzeri_DSM_10701 0
Pseudomonas_putida_KT2440 1
Pseudomonas_protegens_CHA0 0
Pseudomonas_fluorescens_F113 0
Pseudomonas_fluorescens_R124 0
Pseudomonas_fluorescens_Pf0-1 1
Pseudomonas_aeruginosa_SCV20265 0
Pseudomonas_aeruginosa_MTB-1 0
Pseudomonas_aeruginosa_LES431 0
Pseudomonas_aeruginosa_RP73 0
Pseudomonas_aeruginosa_B136-33 0
Pseudomonas_aeruginosa_PA1R 0
Pseudomonas_aeruginosa_PA1 0
Pseudomonas_aeruginosa_DK2 0
Pseudomonas_aeruginosa_NCGM2.S1 0
Pseudomonas_aeruginosa_M18 0
Pseudomonas_aeruginosa_LESB58 0
Pseudomonas_aeruginosa_PA7 0
Pseudomonas_aeruginosa_PAO1 0
Candidatus_Nitrososphaera_gargensis_Ga9.2 1
Candidatus_Nitrosoarchaeum_koreensis_Candidatus_Nitrosopumilus_koreensis_AR1 0
Sulfolobus_islandicus_LAL14/1 2
Sulfolobus_islandicus_REY15A 2
Sulfolobus_islandicus_HVE10/4 4
Sulfolobus_islandicus_Y.G.57.14 2
Sulfolobus_islandicus_L.S.2.15 4
Sulfolobus_islandicus_M.16.27 4
Sulfolobus_islandicus_M.14.25 4
Sulfolobus_islandicus_M.16.4 4
Sulfolobus_islandicus_L.D.8.5 2
Sulfolobus_solfataricus_98/2 2
Sulfolobus_acidocaldarius_SUSAZ 1
Sulfolobus_acidocaldarius_Ron12/I 1
Sulfolobus_acidocaldarius_N8 1
Methanolobus_psychrophilus_R15 0
Archaeoglobus_sulfaticallidus_PM70-1 0
Thermococcus_sp._AM4 0
Thermococcus_sp._CL1 1
Pyrococcus_furiosus_DSM_3638 1
Halorhabdus_tiamatea_SARL4B 1
Haloarcula_hispanica_N601 1

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   10
Pan_troglodytes_69_2.1.4   (Chimpanzee)   10
Gorilla_gorilla_69_3.1   (Western gorilla)   13
Pongo_abelii_69_2   (Sumatran orangutan)   9
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   11
Macaca_mulatta_69_1   (Rhesus monkey)   11
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   8
Otolemur_garnettii_69_3   (Small-eared galago)   7
Microcebus_murinus_69_1   (Gray mouse lemur)   16
Rattus_norvegicus_69_3.4   (Norway rat)   6
Mus_musculus_69_38   (House mouse)   7
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   8
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   10
Cavia_porcellus_69_3   (Domestic guinea pig)   9
Oryctolagus_cuniculus_69_2   (Rabbit)   10
Ochotona_princeps_69   (American pika)   17
Tupaia_belangeri_69   (Northern tree shrew)   16
Sus_scrofa_69_10.2   (Pig)   11
Bos_taurus_69_3.1   (Cattle)   10
Vicugna_pacos_69_1   (Alpaca)   10
Tursiops_truncatus_69_1   (Bottlenose dolphin)   15
Mustela_putorius_furo_69_1.0   (Domestic ferret)   7
Ailuropoda_melanoleuca_69_1   (Giant panda)   10
Canis_familiaris_69_3.1   (Dog)   8
Felis_catus_69   (Domestic cat)   14
Equus_caballus_69_2   (Horse)   10
Myotis_lucifugus_69_2.0   (Little brown bat)   9
Pteropus_vampyrus_69_1   (Large flying fox)   15
Sorex_araneus_69_1   (European shrew)   15
Erinaceus_europaeus_69   (Western European hedgehog)   10
Procavia_capensis_69_1   (Cape rock hyrax)   12
Loxodonta_africana_69_3   (African savanna elephant)   8
Echinops_telfairi_69   (Small Madagascar hedgehog)   11
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   16
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   7
Macropus_eugenii_69_1.0   (Tammar wallaby)   11
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   12
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   8
Ornithorhynchus_anatinus_69_5   (Platypus)   19
Petromyzon_marinus_69_7.0   (Sea lamprey)   3
Meleagris_gallopavo_69_2   (Turkey)   11
Gallus_gallus_69_2   (Chicken)   9
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   7
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   16
Anolis_carolinensis_69_2.0   (Green anole)   7
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   10
Latimeria_chalumnae_69_1   (Coelacanth)   15
Gadus_morhua_69_1   (Atlantic cod)   25
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   14
Takifugu_rubripes_69_4   (Torafugu)   13
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   25
Oryzias_latipes_69_1   (Japanese medaka)   17
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   26
Oreochromis_niloticus_69_1.0   (Nile tilapia)   33
Danio_rerio_69_9   (Zebrafish)   29
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   6
Ciona_intestinalis_69   (Vase tunicate)   11
Drosophila_melanogaster_69_5   (Fruit fly)   4
Caenorhabditis_elegans_69_215   (Roundworm)   5
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   0
Arabidopsis_thaliana_10   (Thale cress)   4

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   55
Homo_sapiens__(NCBI_version)   (Human)   20
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   7
Heliconius_numata__(Incomplete) 2
Loa_loa_v3.3_(Request)   (Eye worm)   3
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   5
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   2
Moniliophthora_perniciosa_FA553__(Genome_survey) 5
Picea_sitchensis__(Incomplete)   (Sitka spruce)   3
Lotus_japonicus__(Early_assembly) 16
Malus_x_domestica_(Duplicate)   (Apple)   14
Ricinus_communis__(Early_assembly)   (Castor bean)   6
Nicotiana_benthamiana_0.4.4_(Early_draft) 11
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   5
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   6
Phoenix_dactylifera__(Early_draft)   (Date palm)   4
Acholeplasma_laidlawii_PG-8A_(duplicate) 0
NCBI_plasmid_sequences_(Plasmids) 25
Protein_Data_Bank_(all_PDB_sequenc) 40
Protozoadb_2010_08_(Protozoadb) 66
TargetDB__(Targets) 40
Core_Eukaryotic_Genes_458_(CEGMA) 0
NCBI_viral_sequences_(Viral) 27
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 4
STRING_v9.0.5_(STRING) 835
Uniprot_2018_03_genome 55446
NCBI_2017_08_genome 16583
PDB_chains_(SCOP_1.75)_(PDB) 1
UniProt__viral_sequences_(Viral) 13

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.