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Home > SCOP hierarchy > Domain combination - _gap_,49899,_gap_,48371,_gap_,50729,81837,50978

Domain combinations for _gap_,49899,_gap_,48371,_gap_,50729,81837,50978 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

49899 - Concanavalin A-like lectins/glucanases
48371 - ARM repeat
50729 - PH domain-like
81837 - BEACH domain
50978 - WD40 repeat-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Homo_sapiens_76_38 (Human) 3

Pan_troglodytes_76_2.1.4 (Chimpanzee) 1

Pongo_abelii_76_2 (Sumatran orangutan) 1

Nomascus_leucogenys_76_1.0 (Northern white-cheeked gibbon) 1

Callithrix_jacchus_76_3.2.1 (White-tufted-ear marmoset) 3

Mus_musculus_76_38 (House mouse) 2

Ictidomys_tridecemlineatus_76_2 (Thirteen-lined ground squirrel) 1

Ochotona_princeps_76 (American pika) 1

Tupaia_belangeri_76 (Northern tree shrew) 1

Bos_taurus_76_3.1 (Cattle) 1

Ovis_aries_76_3.1 (Sheep) 2

Vicugna_pacos_76_1 (Alpaca) 1

Tursiops_truncatus_76_1 (Bottlenose dolphin) 1

Canis_familiaris_76_3.1 (Dog) 1

Felis_catus_76_6.2 (Domestic cat) 1

Equus_caballus_76_2 (Horse) 1

Myotis_lucifugus_76_2.0 (Little brown bat) 1

Pteropus_vampyrus_76_1 (Large flying fox) 1

Loxodonta_africana_76_3 (African savanna elephant) 2

Dasypus_novemcinctus_76_2 (Nine-banded armadillo) 3

Choloepus_hoffmanni_76_1 (Hoffmann's two-fingered sloth) 1

Monodelphis_domestica_76_5 (Gray short-tailed opossum) 1

Ornithorhynchus_anatinus_76_5 (Platypus) 1

Taeniopygia_guttata_76_3.2.4 (Zebra finch) 1

Pelodiscus_sinensis_76_1.0 (Chinese soft-shelled turtle) 2

Xenopus_tropicalis_76_4.2 (Tropical clawed frog) 1

Lepisosteus_oculatus_76 (Spotted gar) 3

Gadus_morhua_76_1 (Atlantic cod) 2

Tetraodon_nigroviridis_76_8 (Spotted green pufferfish) 2

Takifugu_rubripes_76_4 (Torafugu) 8

Gasterosteus_aculeatus_76_1 (Three-spined stickleback) 3

Oryzias_latipes_76_1 (Japanese medaka) 1

Poecilia_formosa_76 (Amazon molly) 3

Oreochromis_niloticus_76_1.0 (Nile tilapia) 3

Danio_rerio_76_9 (Zebrafish) 2

Linepithema_humile_v1.1 (Argentine ant) 1

Capsaspora_owczarzaki_ATCC_30864_ 0

Podospora_anserina_ 1

Verticillium_dahliae_VdLs.17_ 1

Acremonium_alcalophilumv_1.0 1

Ajellomyces_dermatitidis_SLH14081_ 1

Trichophyton_tonsurans_CBS_112818_ 1

Aspergillus_sydowii_v1.0 1

Aspergillus_versicolor_v1.0 1

Neosartorya_fischeri_NRRL_181_ 1

Aspergillus_wentii_v1.0 1

Aspergillus_niger_22 1

Candida_tanzawaensis_NRRL_Y-17324__v1.0 0

Dictyostelium_purpureum_ 1

Thecamonas_trahens_ATCC_50062_ 0

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Strains
Genome Number

Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2) (Tropical clawed frog) 2

Coccidioides_posadasii_str._Silveira_ 1

Ajellomyces_dermatitidis_ER-3_ 1

Batrachochytrium_dendrobatidis_JEL423_ 0

Longest transcript per gene
Genome Number

Homo_sapiens_69_37 (Human) 2

Pan_troglodytes_69_2.1.4 (Chimpanzee) 1

Pongo_abelii_69_2 (Sumatran orangutan) 1

Nomascus_leucogenys_69_1.0 (Northern white-cheeked gibbon) 1

Callithrix_jacchus_69_3.2.1 (White-tufted-ear marmoset) 1

Rattus_norvegicus_69_3.4 (Norway rat) 1

Mus_musculus_69_38 (House mouse) 2

Ictidomys_tridecemlineatus_69_2 (Thirteen-lined ground squirrel) 1

Ochotona_princeps_69 (American pika) 1

Tupaia_belangeri_69 (Northern tree shrew) 1

Bos_taurus_69_3.1 (Cattle) 1

Vicugna_pacos_69_1 (Alpaca) 1

Tursiops_truncatus_69_1 (Bottlenose dolphin) 1

Canis_familiaris_69_3.1 (Dog) 1

Equus_caballus_69_2 (Horse) 1

Myotis_lucifugus_69_2.0 (Little brown bat) 1

Pteropus_vampyrus_69_1 (Large flying fox) 1

Loxodonta_africana_69_3 (African savanna elephant) 2

Dasypus_novemcinctus_69_2 (Nine-banded armadillo) 1

Choloepus_hoffmanni_69_1 (Hoffmann's two-fingered sloth) 1

Monodelphis_domestica_69_5 (Gray short-tailed opossum) 1

Ornithorhynchus_anatinus_69_5 (Platypus) 1

Taeniopygia_guttata_69_3.2.4 (Zebra finch) 1

Pelodiscus_sinensis_69_1.0 (Chinese soft-shelled turtle) 1

Xenopus_tropicalis_69_4.2 (Tropical clawed frog) 1

Gadus_morhua_69_1 (Atlantic cod) 2

Tetraodon_nigroviridis_69_8 (Spotted green pufferfish) 1

Takifugu_rubripes_69_4 (Torafugu) 3

Gasterosteus_aculeatus_69_1 (Three-spined stickleback) 3

Oryzias_latipes_69_1 (Japanese medaka) 1

Oreochromis_niloticus_69_1.0 (Nile tilapia) 3

Danio_rerio_69_9 (Zebrafish) 2

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Others
Genome Number

Homo_sapiens_75_37_(old_version_GRC) (Human) 4

Homo_sapiens__(NCBI_version) (Human) 1

Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate) (House mouse) 2

STRING_v9.0.5_(STRING) 22

Uniprot_2018_03_genome 6970

NCBI_2017_08_genome 923

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Domain combinations for _gap_,49899,_gap_,48371,_gap_,50729,81837,50978 superfamilies in groups of genomes