SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,49899,_gap_,57196,57196,57196,57196,57196,57196,57196,57196,57196,_gap_,49265,_gap_,49265,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

49899 - Concanavalin A-like lectins/glucanases
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
49265 - Fibronectin type III
49265 - Fibronectin type III

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Gorilla_gorilla_76_3.1   (Western gorilla)   0
Papio_anubis_76   (Olive baboon)   0
Rattus_norvegicus_76_5.0   (Norway rat)   1
Felis_catus_76_6.2   (Domestic cat)   1
Gallus_gallus_76_4   (Chicken)   1
Anolis_carolinensis_76_2.0   (Green anole)   1
Latimeria_chalumnae_76_1   (Coelacanth)   1

Longest transcript per gene
Genome     Number
Gorilla_gorilla_69_3.1   (Western gorilla)   0
Anolis_carolinensis_69_2.0   (Green anole)   1
Latimeria_chalumnae_69_1   (Coelacanth)   1

Others
Genome     Number
Homo_sapiens__(NCBI_version)   (Human)   0
Uniprot_2018_03_genome 327
NCBI_2017_08_genome 2

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