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Home > SCOP hierarchy > Domain combination - _gap_,50044,55550,_gap_

Domain combinations for _gap_,50044,55550,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

50044 - SH3-domain
55550 - SH2 domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Homo_sapiens_76_38 (Human) 1

Pan_troglodytes_76_2.1.4 (Chimpanzee) 1

Nomascus_leucogenys_76_1.0 (Northern white-cheeked gibbon) 0

Papio_anubis_76 (Olive baboon) 1

Mus_musculus_76_38 (House mouse) 0

Ictidomys_tridecemlineatus_76_2 (Thirteen-lined ground squirrel) 0

Heterocephalus_glaber_v1.7-2 (Naked mole-rat) 0

Cavia_porcellus_76_3 (Domestic guinea pig) 0

Oryctolagus_cuniculus_76_2 (Rabbit) 1

Vicugna_pacos_76_1 (Alpaca) 0

Tursiops_truncatus_76_1 (Bottlenose dolphin) 0

Ailuropoda_melanoleuca_76_1 (Giant panda) 1

Felis_catus_76_6.2 (Domestic cat) 1

Myotis_lucifugus_76_2.0 (Little brown bat) 0

Sarcophilus_harrisii_76_7.0 (Tasmanian devil) 1

Monodelphis_domestica_76_5 (Gray short-tailed opossum) 1

Ficedula_albicollis_76_1.0 (Collared flycatcher) 0

Pelodiscus_sinensis_76_1.0 (Chinese soft-shelled turtle) 0

Anolis_carolinensis_76_2.0 (Green anole) 0

Takifugu_rubripes_76_4 (Torafugu) 0

Poecilia_formosa_76 (Amazon molly) 0

Oreochromis_niloticus_76_1.0 (Nile tilapia) 0

Strongylocentrotus_purpuratus_v3.1 (Purple sea urchin) 1

Schistosoma_mansoni_ 1

Capsaspora_owczarzaki_ATCC_30864_ 0

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Longest transcript per gene
Genome Number

Homo_sapiens_69_37 (Human) 1

Pan_troglodytes_69_2.1.4 (Chimpanzee) 1

Nomascus_leucogenys_69_1.0 (Northern white-cheeked gibbon) 1

Ictidomys_tridecemlineatus_69_2 (Thirteen-lined ground squirrel) 0

Cavia_porcellus_69_3 (Domestic guinea pig) 0

Oryctolagus_cuniculus_69_2 (Rabbit) 1

Vicugna_pacos_69_1 (Alpaca) 0

Tursiops_truncatus_69_1 (Bottlenose dolphin) 0

Ailuropoda_melanoleuca_69_1 (Giant panda) 1

Felis_catus_69 (Domestic cat) 0

Myotis_lucifugus_69_2.0 (Little brown bat) 0

Sarcophilus_harrisii_69_7.0 (Tasmanian devil) 1

Monodelphis_domestica_69_5 (Gray short-tailed opossum) 1

Pelodiscus_sinensis_69_1.0 (Chinese soft-shelled turtle) 0

Takifugu_rubripes_69_4 (Torafugu) 0

Oreochromis_niloticus_69_1.0 (Nile tilapia) 0

Others
Genome Number

Homo_sapiens_75_37_(old_version_GRC) (Human) 1

Homo_sapiens__(NCBI_version) (Human) 1

STRING_v9.0.5_(STRING) 3

Uniprot_2018_03_genome 630

NCBI_2017_08_genome 128

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