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Domain combinations for _gap_,50249,50249,50249,_gap_,50249,50249 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

50249 - Nucleic acid-binding proteins
50249 - Nucleic acid-binding proteins
50249 - Nucleic acid-binding proteins
50249 - Nucleic acid-binding proteins
50249 - Nucleic acid-binding proteins

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Tupaia_belangeri_76   (Northern tree shrew)   0
Vicugna_pacos_76_1   (Alpaca)   0
Sorex_araneus_76_1   (European shrew)   0
Erinaceus_europaeus_76   (Western European hedgehog)   0
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   0
Ciona_intestinalis_76   (Vase tunicate)   0
Lucilia_cuprina   (Australian sheep blowfly)   1
Drosophila_grimshawi_1.3 1
Drosophila_willistoni_1.3 1
Drosophila_pseudoobscura_2.13 1
Drosophila_suzukii 1
Drosophila_yakuba_1.3 1
Drosophila_sechellia_1.3 1
Drosophila_melanogaster_76_5   (Fruit fly)   4
Drosophila_erecta_1.3 1
Drosophila_ananassae_1.3 1
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   1
Anopheles_gambiae_49_3j   (African malaria mosquito)   1
Candida_parapsilosis_ 0
Malus_domestica_v196   (Apple)   0
Chlorella_vulgaris_ 0
Cyanophora_paradoxa_ 0
Ichthyophthirius_multifiliis_strain_G5_ 0

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Strains
Genome     Number
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   2
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   1

Longest transcript per gene
Genome     Number
Tupaia_belangeri_69   (Northern tree shrew)   0
Vicugna_pacos_69_1   (Alpaca)   0
Sorex_araneus_69_1   (European shrew)   0
Erinaceus_europaeus_69   (Western European hedgehog)   0
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   0
Ciona_intestinalis_69   (Vase tunicate)   0
Drosophila_melanogaster_69_5   (Fruit fly)   1

Others
Genome     Number
Malus_x_domestica_(Duplicate)   (Apple)   0
STRING_v9.0.5_(STRING) 8
NCBI_2017_08_genome 58
Uniprot_2018_03_genome 1064

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