SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,50370 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

50370 - Ricin B-like lectins

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   0
Pan_troglodytes_76_2.1.4   (Chimpanzee)   0
Gorilla_gorilla_76_3.1   (Western gorilla)   0
Pongo_abelii_76_2   (Sumatran orangutan)   0
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   0
Papio_anubis_76   (Olive baboon)   0
Macaca_mulatta_76_1   (Rhesus monkey)   0
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   1
Otolemur_garnettii_76_3   (Small-eared galago)   0
Microcebus_murinus_76_1   (Gray mouse lemur)   0
Rattus_norvegicus_76_5.0   (Norway rat)   1
Mus_musculus_76_38   (House mouse)   0
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   0
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   0
Oryctolagus_cuniculus_76_2   (Rabbit)   0
Ochotona_princeps_76   (American pika)   0
Tupaia_belangeri_76   (Northern tree shrew)   0
Sus_scrofa_76_10.2   (Pig)   0
Bos_taurus_76_3.1   (Cattle)   0
Ovis_aries_76_3.1   (Sheep)   0
Vicugna_pacos_76_1   (Alpaca)   0
Tursiops_truncatus_76_1   (Bottlenose dolphin)   0
Mustela_putorius_furo_76_1.0   (Domestic ferret)   0
Ailuropoda_melanoleuca_76_1   (Giant panda)   0
Canis_familiaris_76_3.1   (Dog)   0
Felis_catus_76_6.2   (Domestic cat)   0
Equus_caballus_76_2   (Horse)   1
Myotis_lucifugus_76_2.0   (Little brown bat)   0
Pteropus_vampyrus_76_1   (Large flying fox)   0
Sorex_araneus_76_1   (European shrew)   1
Erinaceus_europaeus_76   (Western European hedgehog)   1
Procavia_capensis_76_1   (Cape rock hyrax)   0
Loxodonta_africana_76_3   (African savanna elephant)   0
Echinops_telfairi_76   (Small Madagascar hedgehog)   0
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   2
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   1
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   0
Ornithorhynchus_anatinus_76_5   (Platypus)   0
Anas_platyrhynchos_76_1.0   (Mallard)   0
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   1
Anolis_carolinensis_76_2.0   (Green anole)   0
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   0
Latimeria_chalumnae_76_1   (Coelacanth)   0
Lepisosteus_oculatus_76   (Spotted gar)   0
Gadus_morhua_76_1   (Atlantic cod)   2
Takifugu_rubripes_76_4   (Torafugu)   0
Oryzias_latipes_76_1   (Japanese medaka)   0
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   0
Oreochromis_niloticus_76_1.0   (Nile tilapia)   0
Astyanax_mexicanus_76   (Mexican tetra)   0
Danio_rerio_76_9   (Zebrafish)   0
Oikopleura_dioica 0
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   1
Ciona_intestinalis_76   (Vase tunicate)   1
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   0
Adineta_vaga 0
Octopus_bimaculoides_280 0
Crassostrea_gigas_22   (Pacific oyster)   1
Lottia_gigantea_   (Owl limpet)   0
Helobdella_robusta_ 0
Capitella_sp._I_ 0
Heliconius_melpomene_   (Postman butterfly)   0
Bombyx_mori_   (Domestic silkworm)   3
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   0
Linepithema_humile_v1.1   (Argentine ant)   1
Lucilia_cuprina   (Australian sheep blowfly)   0
Drosophila_grimshawi_1.3 0
Drosophila_willistoni_1.3 0
Drosophila_pseudoobscura_2.13 0
Drosophila_persimilis_1.3 0
Drosophila_suzukii 0
Drosophila_yakuba_1.3 0
Drosophila_simulans_1.3 0
Drosophila_sechellia_1.3 0
Drosophila_melanogaster_76_5   (Fruit fly)   0
Drosophila_erecta_1.3 0
Drosophila_ananassae_1.3 0
Drosophila_virilis_1.2 0
Drosophila_mojavensis_1.3 0
Megaselia_scalaris_22 1
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   1
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   1
Anopheles_darlingi_22   (American malaria mosquito)   1
Anopheles_gambiae_49_3j   (African malaria mosquito)   1
Tribolium_castaneum_3.0   (Red flour beetle)   1
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   0
Rhodnius_prolixus_22 0
Daphnia_pulex_   (Common water flea)   5
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   1
Pristionchus_pacificus_ 0
Onchocerca_volvulus_22 0
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   1
Caenorhabditis_japonica_ 0
Caenorhabditis_brenneri_ 0
Caenorhabditis_remanei_ 0
Caenorhabditis_elegans_76_235   (Roundworm)   0
Caenorhabditis_briggsae_2 0
Trichinella_spiralis_22 1
Mnemiopsis_leidyi   (Sea walnut)   0
Acropora_digitifera_v1.0 2
Nematostella_vectensis_1.0   (Starlet sea anemone)   2
Hydra_vulgaris 0
Amphimedon_queenslandica 0
Trichoplax_adhaerens_ 0
Proterospongia_sp._ATCC_50818_ 0
Monosiga_brevicollis_ 0
Sphaeroforma_arctica_JP610_ 3
Capsaspora_owczarzaki_ATCC_30864_ 0
Conidiobolus_coronatus_NRRL28638_v1.0 1
Mortierella_verticillata_NRRL_6337_ 1
Phycomyces_blakesleeanus_ 1
Rhizopus_oryzae_RA_99-880_ 0
Mucor_circinelloides_ 0
Rhizomucor_miehei_CAU432_ 0
Mixia_osmundae_IAM_14324_v1.0 0
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 0
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 0
Microbotryum_violaceum_22 0
Wallemia_sebi_v1.0 1
Sphaerobolus_stellatus_v1.0 11
Piloderma_croceum_F_1598_v1.0 0
Serpula_lacrymans_var._lacrymans_S7.9_ 2
Coniophora_puteana 2
Paxillus_rubicundulus_Ve08.2h10_v1.0 0
Pisolithus_microcarpus_441_v1.0 1
Pisolithus_tinctorius_Marx_270_v1.0 0
Scleroderma_citrinum_Foug_A_v1.0 2
Coprinopsis_cinerea_okayama7_130_v3 12
Pleurotus_ostreatus_   (Oyster mushroom)   3
Amanita_thiersii_Skay4041_v1.0 1
Galerina_marginata_v1.0 8
Hebeloma_cylindrosporum_h7_v2.0 2
Laccaria_bicolor_S238N-H82_ 1
Agaricus_bisporus_var._bisporus_ 5
Stereum_hirsutum_FP-91666_SS1__v1.0 0
Heterobasidion_annosum_ 0
Gloeophyllum_trabeumv1.0 0
Punctularia_strigosozonata_v1.0 0
Sebacina_vermifera_MAFF_305830_v1.0 1
Tulasnella_calospora_AL13/4D_v1.0 1
Postia_placenta_ 0
Wolfiporia_cocos_MD-104_SS10__v1.0 0
Fomitopsis_pinicolav1.0 1
Fomitopsis_pinicola_FP-58527_SS1_v3.0 0
Phanerochaete_chrysosporium_RP-78_2.1 1
Dichomitus_squalens 0
Trametes_versicolor_v1.0 2
Tremella_mesenterica_   (Witches' butter)   2
Daldinia_eschscholzii_EC12_v1.0 0
Apiospora_montagnei_NRRL_25634_v1.0 0
Magnaporthe_poae_ATCC_64411_22 0
Magnaporthe_grisea_70-15_ 0
Podospora_anserina_ 0
Sporotrichum_thermophile_ATCC_42464_ 0
Thielavia_terrestris_NRRL_8126_ 0
Chaetomium_globosum_CBS_148.51_ 0
Neurospora_tetrasperma_ 0
Neurospora_discreta_FGSC_8579_ 0
Neurospora_crassa_OR74A_ 0
Verticillium_albo-atrum_VaMs.102_ 0
Verticillium_dahliae_VdLs.17_ 0
Acremonium_alcalophilumv_1.0 0
Glomerella_graminicola_22 0
Fusarium_oxysporum_f._sp._lycopersici_4286_ 1
Fusarium_verticillioides_7600_ 2
Trichoderma_asperellum_CBS_433.97_v1.0 0
Trichoderma_atroviride_ 1
Trichoderma_citrinoviride_v1.0 1
Trichoderma_reesei_1.2 1
Trichoderma_virens_Gv29-8_ 1
Trichoderma_longibrachiatum_ATCC_18648_v1.0 1
Trichoderma_harzianum_CBS_226.95_v1.0 1
Amorphotheca_resinae_v1.0   (Creosote fungus)   1
Sclerotinia_sclerotiorum_ 1
Leptosphaeria_maculans_22 0
Dothistroma_septosporum 0
Septoria_musiva_v1.0 0
Microsporum_canis_CBS_113480_ 1
Aspergillus_zonatus_v1.0 1
Aspergillus_flavus_NRRL3357_ 0
Catenaria_anguillulae_PL171_v1.0 11
Spizellomyces_punctatus_DAOM_BR117_ 0
Dictyostelium_discoideum 0
Entamoeba_dispar_1.2 2
Entamoeba_invadens_1.2 2
Entamoeba_histolytica_1 2
Selaginella_moellendorffii_ 1
Pinus_taeda   (Loblolly pine)   10
Picea_abies   (Norway spruce)   1
Eucalyptus_grandis_v201   (Rose gum)   3
Theobroma_cacao_B97-61/B2_v1   (Cacao)   0
Gossypium_raimondii_v221 2
Citrus_clementina_v165 1
Citrus_sinensis_v154   (Sweet orange)   1
Thellungiella_halophila_v173 1
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   1
Capsella_rubella_v183 1
Arabidopsis_lyrata_   (Lyrate rockcress)   2
Arabidopsis_thaliana_10   (Thale cress)   1
Carica_papaya_   (Papaya)   1
Medicago_truncatula_   (Barrel medic)   0
Phaseolus_vulgaris_v186   (French bean)   1
Glycine_max_v109   (Soybean)   2
Cucumis_sativus_v122   (Cucumber)   1
Malus_domestica_v196   (Apple)   1
Prunus_persica_v139   (Peach)   1
Linum_usitatissimum_v200   (Flax)   1
Manihot_esculenta_v147   (Cassava)   1
Populus_trichocarpa_v156   (Black cottonwood)   2
Vitis_vinifera_   (Wine grape)   0
Mimulus_guttatus_v140   (Spotted monkey flower)   2
Solanum_lycopersicum_v.2.3   (Tomato)   1
Solanum_tuberosum_   (Potato)   1
Actinidia_chinensis_Hongyang_ 2
Aquilegia_coerulea_v195 1
Triticum_urartu_22 0
Triticum_aestivum_22   (Bread wheat)   2
Aegilops_tauschii_22 0
Brachypodium_distachyon_   (Stiff brome)   5
Oryza_barthii_22   (African wild rice)   0
Oryza_meridionalis_22 2
Oryza_glumaepatula_22 1
Oryza_glaberrima   (African rice)   2
Oryza_punctata_22 3
Oryza_nivara_22 2
Oryza_brachyantha_22   (Malo sina)   1
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   3
Oryza_sativa_v193   (Rice)   3
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   1
Panicum_virgatum_v202   (Switchgrass)   8
Setaria_italica_v164   (Foxtail millet)   2
Zea_mays_subsp._mays_   (Maize)   4
Zea_mays_v181   (Maize)   5
Sorghum_bicolor_   (Sorghum)   2
Musa_balbisiana   (Balbis banana)   0
Musa_acuminata_22   (Wild Malaysian banana)   2
Amborella_trichopoda_22 2
Physcomitrella_patens 1
Asterochloris_sp._Cgr/DA1pho_v1.0 0
Volvox_carteri_f._nagariensis_ 0
Volvox_carteri_v199 0
Chlamydomonas_reinhardtii_4.0 0
Bigelowiella_natans_CCMP2755_22 1
Cyanophora_paradoxa_ 2
Aureococcus_anophagefferens_ 0
Pythium_iwayamai_DAOM_BR242034_22 1
Pythium_arrhenomanes_ATCC_12531_22 2
Pythium_ultimum_v1.7-2 0
Pythium_aphanidermatum_DAOM_BR444_22 1
Pythium_irregulare_DAOM_BR486_22 0
Pythium_vexans_DAOM_BR484_22 0
Phytophthora_ramorum_1.1   (Sudden oak death agent)   2
Phytophthora_sojae_1.1 0
Phytophthora_infestans_T30-4_ 0
Phaeodactylum_tricornutumCCAP_1055/1 2
Fragilariopsis_cylindrus 0
Thalassiosira_pseudonana_CCMP1335 2
Perkinsus_marinus_ATCC_50983_ 3
Paramecium_tetraurelia_ 2
Tetrahymena_thermophila_SB210_1_ 2
Ichthyophthirius_multifiliis_strain_G5_ 1
Cryptosporidium_hominis 0
Cryptosporidium_muris 0
Cryptosporidium_parvum_Iowa_II 0
Toxoplasma_gondii_VEG 0
Toxoplasma_gondii_ME49 0
Toxoplasma_gondii_GT1 0
Babesia_bovis_T2Bo_ 0
Theileria_annulata 0
Plasmodium_yoelii_ssp._yoelii_1_ 0
Plasmodium_chabaudi_ 0
Plasmodium_berghei_ANKA_ 0
Symbiodinium_minutum_clade_B1_v1.2 2
Naegleria_gruberi_ 0
Trichomonas_vaginalis_ 0
Guillardia_theta_CCMP2712_v1.0_ 0
Emiliania_huxleyi_CCMP1516_ 0
Rivularia_sp._PCC_7116 3
Nostoc_sp._PCC_7524 0
Anabaena_sp._90 1
Eggerthella_sp._YY7918 0
Eggerthella_lenta_DSM_2243 0
Nakamurella_multipartita_DSM_44233 1
Catenulispora_acidiphila_DSM_44928 6
Stackebrandtia_nassauensis_DSM_44728 3
Frankia_alni_ACN14a 0
Thermobifida_fusca_YX 0
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 1
Thermomonospora_curvata_DSM_43183 1
Streptosporangium_roseum_DSM_43021 4
Kitasatospora_setae_KM-6054 1
Streptomyces_coelicolor_A3(2) 6
Streptomyces_sp._PAMC26508 1
Streptomyces_flavogriseus_ATCC_33331 1
Streptomyces_sp._SirexAA-E 1
Streptomyces_griseus_subsp._griseus_NBRC_13350 2
Streptomyces_bingchenggensis_BCW-1 4
Streptomyces_violaceusniger_Tu_4113 1
Streptomyces_avermitilis_MA-4680 2
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 4
Streptomyces_scabiei_87.22 2
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 5
Actinosynnema_mirum_DSM_43827 1
Amycolatopsis_mediterranei_U32 4
Kribbella_flavida_DSM_17836 1
Salinispora_arenicola_CNS-205 1
Salinispora_tropica_CNB-440 1
Verrucosispora_maris_AB-18-032 1
Micromonospora_sp._L5 3
Micromonospora_aurantiaca_ATCC_27029 3
Actinoplanes_sp._N902-109 4
Actinoplanes_sp._SE50/110 3
Actinoplanes_missouriensis_431 2
Sanguibacter_keddieii_DSM_10542 1
Microbacterium_testaceum_StLB037 0
Jonesia_denitrificans_DSM_20603 1
Brachybacterium_faecium_DSM_4810 0
Cellulomonas_flavigena_DSM_20109 0
Cellulomonas_fimi_ATCC_484 1
[Cellvibrio]_gilvus_ATCC_13127 0
Arthrobacter_chlorophenolicus_A6 0
Renibacterium_salmoninarum_ATCC_33209 0
Bifidobacterium_longum_subsp._longum_JDM301 0
Arcanobacterium_haemolyticum_DSM_20595 0
Herpetosiphon_aurantiacus_DSM_785 1
Clostridium_cellulolyticum_H10 0
Ruminococcus_albus_7 0
butyrate-producing_bacterium_SM4/1 1
Clostridium_lentocellum_DSM_5427 0
[Ruminococcus]_torques 0
Butyrivibrio_proteoclasticus_B316 0
Butyrivibrio_fibrisolvens 0
Clostridium_cellulovorans_743B 0
Clostridium_acetobutylicum_ATCC_824 0
Caldicellulosiruptor_obsidiansis_OB47 0
Caldicellulosiruptor_kronotskyensis_2002 0
Caldicellulosiruptor_hydrothermalis_108 0
Caldicellulosiruptor_owensensis_OL 0
Streptococcus_gallolyticus_UCN34 0
Paenibacillus_sp._JDR-2 0
Paenibacillus_polymyxa_M1 0
Bacillus_licheniformis_DSM_13_=_ATCC_14580 0
Haliscomenobacter_hydrossis_DSM_1100 0
Niastella_koreensis_GR20-10 0
Chitinophaga_pinensis_DSM_2588 2
Fibrella_aestuarina 0
Spirosoma_linguale_DSM_74 0
Pedobacter_heparinus_DSM_2366 1
Sphingobacterium_sp._21 0
Aequorivita_sublithincola_DSM_14238 0
Zobellia_galactanivorans 0
Cellulophaga_lytica_DSM_7489 0
Fibrobacter_succinogenes_subsp._succinogenes_S85 1
Opitutus_terrae_PB90-1 0
Granulicella_tundricola_MP5ACTX9 0
Granulicella_mallensis_MP5ACTX8 0
Acidobacterium_capsulatum_ATCC_51196 0
Campylobacter_lari_RM2100 1
Campylobacter_sp._03-427 2
Campylobacter_fetus_subsp._fetus_82-40 3
Helicobacter_hepaticus_ATCC_51449 1
Helicobacter_cinaedi_PAGU611 2
Sorangium_cellulosum_'So_ce_56' 3
Stigmatella_aurantiaca_DW4/3-1 2
Corallococcus_coralloides_DSM_2259 0
Myxococcus_xanthus_DK_1622 0
Myxococcus_fulvus_HW-1 1
Laribacter_hongkongensis_HLHK9 1
Chromobacterium_violaceum_ATCC_12472 2
Burkholderia_sp._RPE64 0
Burkholderia_sp._CCGE1002 0
Burkholderia_pseudomallei_1106a 0
Burkholderia_mallei_SAVP1 0
Burkholderia_ambifaria_AMMD 0
Delftia_sp._Cs1-4 1
Delftia_acidovorans_SPH-1 1
Acidovorax_sp._KKS102 1
Caulobacter_sp._K31 1
Sphingomonas_wittichii_RW1 1
Tistrella_mobilis_KA081020-065 0
Methylobacterium_chloromethanicum_CM4 0
Methylobacterium_extorquens_AM1 0
Methylobacterium_sp._4-46 0
Saccharophagus_degradans_2-40 0
Teredinibacter_turnerae_T7901 2
Cellvibrio_japonicus_Ueda107 1
Aggregatibacter_actinomycetemcomitans_D7S-1 1
Haemophilus_parasuis_SH0165 2
Haemophilus_ducreyi_35000HP 2
Actinobacillus_pleuropneumoniae_serovar_5b_str._L20 1
Vibrio_harveyi_ATCC_BAA-1116 1
Vibrio_furnissii_NCTC_11218 0
Photobacterium_profundum_SS9 1
Marinobacter_hydrocarbonoclasticus_ATCC_49840 0
Hahella_chejuensis_KCTC_2396 0
Marinomonas_mediterranea_MMB-1 0
gamma_proteobacterium_HdN1 0
Salmonella_bongori_NCTC_12419 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 1
Methanohalobium_evestigatum_Z-7303 0
Halopiger_xanaduensis_SH-6 0
Haloterrigena_turkmenica_DSM_5511 0
Halomicrobium_mukohataei_DSM_12286 1
Haloarcula_marismortui_ATCC_43049 0

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   0
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   0
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   1
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   0
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   0
Cryptococcus_neoformans_var._grubii_H99_ 1
Cryptococcus_neoformans_B-3501A_ 1
Batrachochytrium_dendrobatidis_JEL423_ 0
Batrachochytrium_dendrobatidis_JAM81_ 0
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   1
Hordeum_vulgare_22   (Domesticated barley)   1
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   2
Chamaesiphon_minutus_PCC_6605 1
Cyanothece_sp._ATCC_51142 0
Nocardiopsis_alba_ATCC_BAA-2165 1
Streptomyces_albus_J1074 3
Streptomyces_rapamycinicus_NRRL_5491 1
Streptomyces_davawensis_JCM_4913 6
Streptomyces_fulvissimus_DSM_40593 1
Streptomyces_venezuelae_ATCC_10712 2
Streptomyces_collinus_Tu_365 2
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 4
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 5
Saccharothrix_espanaensis_DSM_44229 4
Amycolatopsis_mediterranei_RB 4
Amycolatopsis_mediterranei_S699 4
Amycolatopsis_mediterranei_S699 4
Amycolatopsis_orientalis_HCCB10007 3
Actinoplanes_friuliensis_DSM_7358 3
Nocardia_brasiliensis_ATCC_700358 2
Mycobacterium_liflandii_128FXT 1
Leifsonia_xyli_subsp._cynodontis_DSM_46306 0
Bifidobacterium_longum_NCC2705 0
Bifidobacterium_longum_DJO10A 0
Bifidobacterium_longum_subsp._infantis_157F 0
Bifidobacterium_longum_subsp._longum_KACC_91563 0
Bifidobacterium_longum_subsp._longum_BBMN68 0
Bifidobacterium_longum_subsp._longum_JCM_1217 0
Actinomyces_graevenitzii_C83_ 1
Eubacterium_siraeum_V10Sc8a 0
Faecalibacterium_prausnitzii_L2-6 0
Ruminococcus_champanellensis_18P13 0
Desulfitobacterium_hafniense_DCB-2 0
Clostridium_saccharolyticum_Clostridium_cf._saccharolyticum_K10 1
Coprococcus_catus_GD/7 0
Clostridium_acetobutylicum_DSM_1731 0
Clostridium_acetobutylicum_EA_2018 0
Enterococcus_mundtii_QU_25 1
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_BAA-2069 0
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_43143 0
Paenibacillus_sp._Y412MC10 0
Paenibacillus_larvae_subsp._larvae_DSM_25430 1
Paenibacillus_polymyxa_CR1 0
Paenibacillus_polymyxa_SC2 0
Bacillus_licheniformis_9945A 0
Bacillus_licheniformis_DSM_13_=_ATCC_14580 0
Bacillus_thuringiensis_MC28 0
Bacillus_cereus_Q1 0
Fibrobacter_succinogenes_subsp._succinogenes_S85 1
Campylobacter_jejuni_Waterborne_C.jejuni_Outbreak 1
Campylobacter_jejuni_RM1221 1
Campylobacter_jejuni_subsp._jejuni_00-2544 1
Campylobacter_jejuni_subsp._jejuni_00-2538 1
Campylobacter_jejuni_subsp._jejuni_00-2426 1
Campylobacter_jejuni_subsp._jejuni_00-2425 1
Campylobacter_jejuni_subsp._jejuni_PT14 1
Campylobacter_jejuni_subsp._jejuni_ICDCCJ07001 1
Campylobacter_jejuni_subsp._jejuni_S3 1
Campylobacter_jejuni_subsp._jejuni_M1 1
Campylobacter_jejuni_subsp._jejuni_IA3902 1
Campylobacter_jejuni_subsp._jejuni_81116 1
Campylobacter_jejuni_subsp._jejuni_81-176 1
Campylobacter_jejuni_subsp._jejuni_NCTC_11168-BN148 1
Campylobacter_jejuni_subsp._jejuni_NCTC_11168_=_ATCC_700819 1
Campylobacter_coli_76339 1
Campylobacter_coli_15-537360 1
Campylobacter_coli_CVM_N29710 1
Sorangium_cellulosum_So0157-2 0
Myxococcus_stipitatus_DSM_14675 1
Burkholderia_sp._YI23 0
Burkholderia_pseudomallei_MSHR305 0
Burkholderia_pseudomallei_NCTC_13179 0
Burkholderia_pseudomallei_BPC006 0
Burkholderia_pseudomallei_1026b 0
Burkholderia_pseudomallei_MSHR346 0
Burkholderia_pseudomallei_668 0
Burkholderia_pseudomallei_1710b 0
Burkholderia_pseudomallei_K96243 0
Burkholderia_mallei_NCTC_10229 0
Burkholderia_mallei_NCTC_10247 0
Burkholderia_mallei_ATCC_23344 0
Burkholderia_ambifaria_MC40-6 0
Variovorax_paradoxus_EPS 1
Rhodopseudomonas_palustris_HaA2 1
Simiduia_agarivorans_SA1_=_DSM_21679 0
Aggregatibacter_actinomycetemcomitans_ANH9381 1
Aggregatibacter_actinomycetemcomitans_D11S-1 1
Haemophilus_parasuis_ZJ0906 2
Actinobacillus_suis_H91-0380 1
Actinobacillus_pleuropneumoniae_serovar_3_str._JL03 1
Actinobacillus_pleuropneumoniae_serovar_7_str._AP76 1
Vibrio_nigripulchritudo_VibrioScope 1
Stenotrophomonas_maltophilia_JV3 0
Yersinia_enterocolitica_subsp._palearctica_105.5R(r) 1
Salmonella_bongori_N268-08 1
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 2
Salmonella_enterica_subsp._enterica_serovar_Javiana_str._CFSAN001992 1
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 1
Salmonella_enterica_subsp._enterica_serovar_Enteritidis_str._P125109 1
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 1
Salmonella_enterica_subsp._enterica_serovar_Newport_str._USMARC-S3124.1 1
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 1
Salmonella_enterica_subsp._enterica_serovar_Dublin_str._CT_02021853 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 1
Salmonella_enterica_The_genome_of__subsp._enterica_serovar_Typhimurium_str._DT2 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_Definitive_Type_104 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty21a 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2 1
Salmonella_enterica_serovar_Bovismorbificans_genomics 1
Salmonella_enterica_subsp._enterica_serovar_Agona_str._24249 1
Salmonella_enterica_subsp._enterica_serovar_Agona_str._SL483 1
Salmonella_enterica_subsp._enterica_serovar_Weltevreden_str._2007-60-3289-1 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_B_str._SPB7 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._AKU_12601 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._ATCC_9150 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._B182 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._CDC1983-67 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._RKS5078 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum_str._287/91 1
Escherichia_coli_IHE3034 0
Escherichia_coli_APEC_O1 0
Acinetobacter_junii__SH205 1
Acinetobacter_johnsonii__SH046 1
Methanolobus_psychrophilus_R15 0

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   0
Pan_troglodytes_69_2.1.4   (Chimpanzee)   0
Gorilla_gorilla_69_3.1   (Western gorilla)   0
Pongo_abelii_69_2   (Sumatran orangutan)   0
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   0
Macaca_mulatta_69_1   (Rhesus monkey)   0
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   0
Otolemur_garnettii_69_3   (Small-eared galago)   0
Microcebus_murinus_69_1   (Gray mouse lemur)   0
Rattus_norvegicus_69_3.4   (Norway rat)   0
Mus_musculus_69_38   (House mouse)   0
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   0
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   0
Oryctolagus_cuniculus_69_2   (Rabbit)   0
Ochotona_princeps_69   (American pika)   0
Tupaia_belangeri_69   (Northern tree shrew)   0
Sus_scrofa_69_10.2   (Pig)   0
Bos_taurus_69_3.1   (Cattle)   0
Vicugna_pacos_69_1   (Alpaca)   0
Tursiops_truncatus_69_1   (Bottlenose dolphin)   0
Mustela_putorius_furo_69_1.0   (Domestic ferret)   0
Ailuropoda_melanoleuca_69_1   (Giant panda)   0
Canis_familiaris_69_3.1   (Dog)   0
Felis_catus_69   (Domestic cat)   0
Equus_caballus_69_2   (Horse)   0
Myotis_lucifugus_69_2.0   (Little brown bat)   0
Pteropus_vampyrus_69_1   (Large flying fox)   0
Sorex_araneus_69_1   (European shrew)   1
Erinaceus_europaeus_69   (Western European hedgehog)   1
Procavia_capensis_69_1   (Cape rock hyrax)   0
Echinops_telfairi_69   (Small Madagascar hedgehog)   0
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   1
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   1
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   0
Ornithorhynchus_anatinus_69_5   (Platypus)   0
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   1
Anolis_carolinensis_69_2.0   (Green anole)   0
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   0
Latimeria_chalumnae_69_1   (Coelacanth)   0
Gadus_morhua_69_1   (Atlantic cod)   1
Oryzias_latipes_69_1   (Japanese medaka)   0
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   0
Oreochromis_niloticus_69_1.0   (Nile tilapia)   0
Danio_rerio_69_9   (Zebrafish)   0
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   1
Ciona_intestinalis_69   (Vase tunicate)   1
Drosophila_melanogaster_69_5   (Fruit fly)   0
Caenorhabditis_elegans_69_215   (Roundworm)   0
Arabidopsis_thaliana_10   (Thale cress)   1

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   0
Homo_sapiens__(NCBI_version)   (Human)   0
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   0
Loa_loa_v3.3_(Request)   (Eye worm)   0
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   0
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   0
Moniliophthora_perniciosa_FA553__(Genome_survey) 0
Encephalitozoon_intestinalis__(endoparasite) 1
Encephalitozoon_cuniculi_(endoparasite) 2
Picea_sitchensis__(Incomplete)   (Sitka spruce)   5
Lotus_japonicus__(Early_assembly) 0
Malus_x_domestica_(Duplicate)   (Apple)   1
Ricinus_communis__(Early_assembly)   (Castor bean)   1
Nicotiana_benthamiana_0.4.4_(Early_draft) 3
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   1
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 1
NCBI_plasmid_sequences_(Plasmids) 23
PDB_chains_(SCOP_1.75)_(PDB) 2
Protozoadb_2010_08_(Protozoadb) 8
UniProt__viral_sequences_(Viral) 1
STRING_v9.0.5_(STRING) 128
Uniprot_2018_03_genome 11574
Protein_Data_Bank_(all_PDB_sequenc) 3
NCBI_2017_08_genome 14652
NCBI_viral_sequences_(Viral) 1
TargetDB__(Targets) 3

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