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Domain combinations for _gap_,50494,_gap_,54060 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

50494 - Trypsin-like serine proteases
54060 - His-Me finger endonucleases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Coccomyxa_subellipsoidea_sp._C-169_v2 0
Chlorella_vulgaris_ 0
Amycolatopsis_mediterranei_U32 1
Rhodococcus_jostii_RHA1 1
Rhodococcus_opacus_B4 1
Arthrobacter_phenanthrenivorans_Sphe3 1
Deinococcus_gobiensis_I-0 1
Paenibacillus_polymyxa_M1 1
Chitinophaga_pinensis_DSM_2588 1
Spirosoma_linguale_DSM_74 0
Sphingobacterium_sp._21 0
Rhodopirellula_baltica_SH_1 1
Pirellula_staleyi_DSM_6068 1
Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586 1
Myxococcus_xanthus_DK_1622 1
Herbaspirillum_seropedicae_SmR1 0
Achromobacter_xylosoxidans 0
Jannaschia_sp._CCS1 1
Rhodospirillum_rubrum_F11 1
Methylobacterium_nodulans_ORS_2060 1
Sinorhizobium_fredii_NGR234 1
Methylocella_silvestris_BL2 0
Rhodopseudomonas_palustris_BisA53 0
Methylocystis_sp._SC2 0
Pantoea_ananatis_LMG_20103 1
Pseudomonas_aeruginosa_UCBPP-PA14 0
Methanosarcina_acetivorans_C2A 1
Methanosarcina_barkeri_str._Fusaro 1

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Strains
Genome     Number
Stanieria_cyanosphaera_PCC_7437 0
Frankia_sp._EuI1c 1
Amycolatopsis_mediterranei_RB 1
Amycolatopsis_mediterranei_S699 1
Amycolatopsis_mediterranei_S699 1
Caulobacter_crescentus_CB15 0
Rhodospirillum_rubrum_ATCC_11170 1
Bradyrhizobium_sp._S23321 0
Bradyrhizobium_sp._BTAi1 0
Pantoea_ananatis_AJ13355 1
Pseudomonas_aeruginosa_SCV20265 0
Pseudomonas_aeruginosa_MTB-1 0
Pseudomonas_aeruginosa_LES431 0
Pseudomonas_aeruginosa_B136-33 0
Pseudomonas_aeruginosa_PA1R 0
Pseudomonas_aeruginosa_PA1 0
Pseudomonas_aeruginosa_DK2 0
Pseudomonas_aeruginosa_NCGM2.S1 0
Pseudomonas_aeruginosa_M18 0
Pseudomonas_aeruginosa_LESB58 0
Pseudomonas_aeruginosa_PA7 0
Pseudomonas_aeruginosa_PAO1 0

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Others
Genome     Number
NCBI_plasmid_sequences_(Plasmids) 2
STRING_v9.0.5_(STRING) 12
Uniprot_2018_03_genome 2394
NCBI_2017_08_genome 407
TargetDB__(Targets) 2

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