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Domain combinations for _gap_,50729,47473,_gap_,51695,49562 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

50729 - PH domain-like
47473 - EF-hand
51695 - PLC-like phosphodiesterases
49562 - C2 domain (Calcium/lipid-binding domain, CaLB)

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Macaca_mulatta_76_1   (Rhesus monkey)   0
Rattus_norvegicus_76_5.0   (Norway rat)   0
Mus_musculus_76_38   (House mouse)   0
Sus_scrofa_76_10.2   (Pig)   0
Bos_taurus_76_3.1   (Cattle)   0
Ovis_aries_76_3.1   (Sheep)   0
Canis_familiaris_76_3.1   (Dog)   0
Felis_catus_76_6.2   (Domestic cat)   0
Danio_rerio_76_9   (Zebrafish)   0
Amphimedon_queenslandica 0
Capsaspora_owczarzaki_ATCC_30864_ 0
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 1
Pisolithus_tinctorius_Marx_270_v1.0 2
Aspergillus_brasiliensis_v1.0 0
Aspergillus_carbonarius_ITEM_5010_ 0
Aspergillus_terreus_NIH2624_ 0
Aspergillus_niger_22 0
Aspergillus_niger_ATCC_1015_ 0
Neospora_caninum 1
Toxoplasma_gondii_VEG 1
Toxoplasma_gondii_ME49 1
Toxoplasma_gondii_GT1 1

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Strains
Genome     Number
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   0
Neospora_caninum_Nc-Liverpool_6.2 1

Longest transcript per gene
Genome     Number
Rattus_norvegicus_69_3.4   (Norway rat)   0
Mus_musculus_69_38   (House mouse)   0
Sus_scrofa_69_10.2   (Pig)   0
Bos_taurus_69_3.1   (Cattle)   0
Canis_familiaris_69_3.1   (Dog)   0
Danio_rerio_69_9   (Zebrafish)   0

Others
Genome     Number
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   0
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   0
Protozoadb_2010_08_(Protozoadb) 2
STRING_v9.0.5_(STRING) 0
Uniprot_2018_03_genome 600
NCBI_2017_08_genome 18

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