SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain combinations for _gap_,50729,_gap_,46785,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

50729 - PH domain-like
46785 - "Winged helix" DNA-binding domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Jump to [ Top of page · Domain combinations in individual genomes ]

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 1
Microbotryum_violaceum_22 0
Piloderma_croceum_F_1598_v1.0 1
Trichoderma_atroviride_ 0
Ectocarpus_siliculosus 1
Pythium_iwayamai_DAOM_BR242034_22 1
Pythium_irregulare_DAOM_BR486_22 1
Hyaloperonospora_arabidopsidis_22 1

Strains
Genome     Number
Cryptococcus_neoformans_B-3501A_ 1
Cryptococcus_neoformans_JEC21_ 1

Others
Genome     Number
STRING_v9.0.5_(STRING) 1
NCBI_2017_08_genome 6
Uniprot_2018_03_genome 273

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]